RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 IGLV3-25P01717 112 aa12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 ELFN1P0C7U0 828 aa12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 MPP3Q13368 585 aa12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 CCDC6Q16204 474 aa12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 UGP2Q16851 508 aa12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 FASTKD1Q53R41 847 aaKnown RBP12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 TAF1BQ53T94 588 aaPredicted RBP12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 RASSF3Q86WH2 238 aa12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 TMPRSS6Q8IU80 811 aa12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 KIF2BQ8N4N8 673 aa12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 MCUQ8NE86 351 aa12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 WFDC5Q8TCV5 224 aa12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 UHRF1Q96T88 793 aaPredicted RBP12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 CLEC4EQ9ULY5 219 aa12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 DOLKQ9UPQ8 538 aa12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 MAGEB16A2A368 324 aa12.49□□□□□ -0.41
SYNGAP1-207ENST00000628646 F8W8V4 182 aa12.49□□□□□ -0.41
SYNGAP1-207ENST00000628646 PRKCHP24723 683 aa12.49□□□□□ -0.41
SYNGAP1-207ENST00000628646 SPRP35270 261 aaPredicted RBP12.49□□□□□ -0.41
SYNGAP1-207ENST00000628646 PXNP49023 591 aaPredicted RBP12.49□□□□□ -0.41
SYNGAP1-207ENST00000628646 NAB1Q13506 487 aa12.49□□□□□ -0.41
SYNGAP1-207ENST00000628646 KRT33BQ14525 404 aa12.49□□□□□ -0.41
SYNGAP1-207ENST00000628646 HSF5Q4G112 596 aaPredicted RBP12.49□□□□□ -0.41
SYNGAP1-207ENST00000628646 KLK6Q92876 244 aa12.49□□□□□ -0.41
SYNGAP1-207ENST00000628646 TRIM56Q9BRZ2 755 aaKnown RBP12.49□□□□□ -0.41
SYNGAP1-207ENST00000628646 FBXL12Q9NXK8 326 aa12.49□□□□□ -0.41
SYNGAP1-207ENST00000628646 BAIAP2L1Q9UHR4 511 aa12.49□□□□□ -0.41
SYNGAP1-207ENST00000628646 MUTYHQ9UIF7 546 aa12.49□□□□□ -0.41
SYNGAP1-207ENST00000628646 MEI4A8MW99 385 aa12.49□□□□□ -0.41
SYNGAP1-207ENST00000628646 TRIM49D1C9J1S8 452 aa12.49□□□□□ -0.41
SYNGAP1-207ENST00000628646 METTL18O95568 372 aa12.49□□□□□ -0.41
SYNGAP1-207ENST00000628646 ZBTB17Q13105 803 aa12.49□□□□□ -0.41
SYNGAP1-207ENST00000628646 MYLK3Q32MK0 819 aa12.49□□□□□ -0.41
SYNGAP1-207ENST00000628646 ADHFE1Q8IWW8 467 aa12.49□□□□□ -0.41
SYNGAP1-207ENST00000628646 SUV39H2Q9H5I1 410 aa12.49□□□□□ -0.41
SYNGAP1-207ENST00000628646 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.49□□□□□ -0.41
SYNGAP1-207ENST00000628646 IL36AQ9UHA7 158 aa12.49□□□□□ -0.41
SYNGAP1-207ENST00000628646 TCRBV21S2A2A0A5A6 115 aa12.49□□□□□ -0.41
SYNGAP1-207ENST00000628646 CFAP99D6REC4 459 aa12.49□□□□□ -0.41
SYNGAP1-207ENST00000628646 CIB2O75838 187 aa12.49□□□□□ -0.41
SYNGAP1-207ENST00000628646 TYK2P29597 1187 aa12.49□□□□□ -0.41
SYNGAP1-207ENST00000628646 ZNF234Q14588 700 aa12.49□□□□□ -0.41
SYNGAP1-207ENST00000628646 ZNF776Q68DI1 518 aaPredicted RBP12.49□□□□□ -0.41
SYNGAP1-207ENST00000628646 PTAR1Q7Z6K3 402 aaPredicted RBP12.49□□□□□ -0.41
SYNGAP1-207ENST00000628646 VPS39Q96JC1 886 aa12.49□□□□□ -0.41
SYNGAP1-207ENST00000628646 OLFM3Q96PB7 478 aa12.49□□□□□ -0.41
SYNGAP1-207ENST00000628646 GBA3Q9H227 469 aa12.49□□□□□ -0.41
SYNGAP1-207ENST00000628646 CACNG3O60359 315 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 OLFM2O95897 454 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 POU2F2P09086 479 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 ITGALP20701 1170 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 ARFIP2P53365 341 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 TCEA2Q15560 299 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 SETMARQ53H47 684 aaPredicted RBP12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 EGFLAMQ63HQ2 1017 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 GDPD4Q6W3E5 623 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 GPATCH11Q8N954 259 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 THOC1Q96FV9 657 aaKnown RBP12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 SCYL1Q96KG9 808 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 SIGLEC10Q96LC7 697 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 KLF6Q99612 283 aaPredicted RBP12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 SPATA16Q9BXB7 569 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 INVSQ9Y283 1065 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 SLC31A1O15431 190 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 LAMTOR5O43504 91 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 SMAD6O43541 496 aaKnown RBP12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 STAMBPO95630 424 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 NDST3O95803 873 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 EFEMP2O95967 443 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 IGLV3-27P01718 113 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 RALBP11234 206 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 SPDYAQ5MJ70 313 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 RSPRY1Q96DX4 576 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 OXNAD1Q96HP4 312 aaPredicted RBP12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 FEM1CQ96JP0 617 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 NUDCD1Q96RS6 583 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 C1QTNF7Q9BXJ2 289 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 S1PR5Q9H228 398 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 TPSB2P20231 275 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 TPSAB1Q15661 275 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 FUT11Q495W5 492 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 TLDC1Q6P9B6 456 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 DOK6Q6PKX4 331 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 MYEOVQ96EZ4 313 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 TPSD1Q9BZJ3 242 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 VPS11Q9H270 941 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 RETREG1Q9H6L5 497 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 GOLGA8TH3BQL2 631 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 GOLGA8RI6L899 631 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 MAFKO60675 156 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 SIN3BO75182 1162 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 SRCP12931 536 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 VAV1P15498 845 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 HLA-DPA1P20036 260 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 KCNA4P22459 653 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 CHRNA4P43681 627 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 THOP1P52888 689 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 NRG1Q02297 640 aaPredicted RBP12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 MPP5Q8N3R9 675 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 MSLNLQ96KJ4 702 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms