RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 LSM12Q3MHD2 195 aaKnown RBP12.82□□□□□ -0.36
SCN8A-209ENST00000627620 BROXQ5VW32 411 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 MZT2AQ6P582 158 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 ABRAXAS1Q6UWZ7 409 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 PACS2Q86VP3 889 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 FGFBP2Q9BYJ0 223 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 HMG20AQ9NP66 347 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 GRM6O15303 877 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 OR10H3O60404 316 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 ITGAXP20702 1163 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 WARSP23381 471 aaKnown RBP12.82□□□□□ -0.36
SCN8A-209ENST00000627620 CXCR3P49682 368 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 SPIRE1Q08AE8 756 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 USP4Q13107 963 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 NDUFAF6Q330K2 333 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 ANXA8L1Q5VT79 327 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 ARMC3Q5W041 872 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 TTC27Q6P3X3 843 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 TRIM40Q6P9F5 258 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.82□□□□□ -0.36
SCN8A-209ENST00000627620 PARGQ86W56 976 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 RAVER1Q8IY67 606 aaKnown RBP12.82□□□□□ -0.36
SCN8A-209ENST00000627620 ZNF540Q8NDQ6 660 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 MYDGFQ969H8 173 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 FNDC11Q9BVV2 318 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 ACAT2Q9BWD1 397 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 GMIPQ9P107 970 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 SLC17A7Q9P2U7 560 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 RIPK3Q9Y572 518 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 NPEPPSL1A6NEC2 478 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 DNTTP04053 509 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 ANPEPP15144 967 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 ADSSP30520 456 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 NDUFV1P49821 464 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 SPIBQ01892 262 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 FUT2Q10981 343 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 ALG11Q2TAA5 492 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.82□□□□□ -0.36
SCN8A-209ENST00000627620 CUZD1Q86UP6 607 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 TSPAN14Q8NG11 270 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 SLC22A3O75751 556 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 CCNYL3P0C7X3 344 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 BMP7P18075 431 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 UGT2B15P54855 530 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 TAB1Q15750 504 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 VSTM1Q6UX27 236 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 OTOP3Q7RTS5 596 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 HIPK1Q86Z02 1210 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 DEPDC4Q8N2C3 294 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 ATAD1Q8NBU5 361 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 BSNDQ8WZ55 320 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 NDRG1Q92597 394 aaKnown RBP12.82□□□□□ -0.36
SCN8A-209ENST00000627620 TNFRSF25Q93038 417 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 FAM192AQ9GZU8 254 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 MAT2BQ9NZL9 334 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 SAMHD1Q9Y3Z3 626 aaKnown RBP12.82□□□□□ -0.36
SCN8A-209ENST00000627620 TRAF6Q9Y4K3 522 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 AP3D1O14617 1153 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 SERPINB7O75635 380 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 GPR158Q5T848 1215 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 PMF1Q6P1K2 205 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 SAPCD2Q86UD0 394 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 OR7A2PQ8NGA2 310 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 OR4A15Q8NGL6 344 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 KCTD15Q96SI1 283 aaPredicted RBP12.81□□□□□ -0.36
SCN8A-209ENST00000627620 ZNF780BQ9Y6R6 833 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 MDM4O15151 490 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 ELNP15502 786 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 BUD31P41223 144 aaPredicted RBP12.81□□□□□ -0.36
SCN8A-209ENST00000627620 IL12RB1P42701 662 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 GRM3Q14832 879 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 PDK3Q15120 406 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 FAM110CQ1W6H9 321 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 PARP15Q460N3 678 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 RHBDF2Q6PJF5 856 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 CLP1Q92989 425 aaKnown RBP12.81□□□□□ -0.36
SCN8A-209ENST00000627620 PPCDCQ96CD2 204 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 LRRC4CQ9HCJ2 640 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 REXO2Q9Y3B8 237 aaKnown RBP12.81□□□□□ -0.36
SCN8A-209ENST00000627620 TMEM131LA2VDJ0 1609 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 TBC1D3DA0A087WVF3 549 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 TBC1D3IA0A087WXS9 549 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 TBC1D3EA0A087X179 549 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 TBC1D3KA0A087X1G2 549 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 TBC1D3FA6NER0 549 aaPredicted RBP12.81□□□□□ -0.36
SCN8A-209ENST00000627620 TBC1D3LB9A6J9 549 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 GTPBP1O00178 669 aaKnown RBP12.81□□□□□ -0.36
SCN8A-209ENST00000627620 SLC25A12O75746 678 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 RPP40O75818 363 aaKnown RBP12.81□□□□□ -0.36
SCN8A-209ENST00000627620 TBC1D3HP0C7X1 549 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 TTKP33981 857 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 CBX2Q14781 532 aaPredicted RBP12.81□□□□□ -0.36
SCN8A-209ENST00000627620 TBC1D3GQ6DHY5 549 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 TBC1D3CQ6IPX1 549 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 AMIGO2Q86SJ2 522 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 TBC1D3Q8IZP1 549 aaPredicted RBP12.81□□□□□ -0.36
SCN8A-209ENST00000627620 AARSD1Q9BTE6 412 aaKnown RBP12.81□□□□□ -0.36
SCN8A-209ENST00000627620 ERVK-5Q9HDB9 667 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 IMP3Q9NV31 184 aaKnown RBP12.81□□□□□ -0.36
SCN8A-209ENST00000627620 DHRS12A0PJE2 317 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms