RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 GPS1Q13098 491 aa14.75□□□□□ -0.05
PNKP-221ENST00000627317 UAP1L1Q3KQV9 507 aa14.75□□□□□ -0.05
PNKP-221ENST00000627317 TMEM52BQ4KMG9 183 aa14.75□□□□□ -0.05
PNKP-221ENST00000627317 SETMARQ53H47 684 aaPredicted RBP14.75□□□□□ -0.05
PNKP-221ENST00000627317 N4BP2L1Q5TBK1 243 aaPredicted RBP14.75□□□□□ -0.05
PNKP-221ENST00000627317 SEL1L3Q68CR1 1132 aa14.75□□□□□ -0.05
PNKP-221ENST00000627317 LAYNQ6UX15 382 aa14.75□□□□□ -0.05
PNKP-221ENST00000627317 SLC25A41Q8N5S1 370 aa14.75□□□□□ -0.05
PNKP-221ENST00000627317 SPATA4Q8NEY3 305 aa14.75□□□□□ -0.05
PNKP-221ENST00000627317 SCRN2Q96FV2 425 aa14.75□□□□□ -0.05
PNKP-221ENST00000627317 MCCC1Q96RQ3 725 aaPredicted RBP14.75□□□□□ -0.05
PNKP-221ENST00000627317 TBL1YQ9BQ87 522 aa14.75□□□□□ -0.05
PNKP-221ENST00000627317 IL21RQ9HBE5 538 aa14.75□□□□□ -0.05
PNKP-221ENST00000627317 ETNK1Q9HBU6 452 aa14.75□□□□□ -0.05
PNKP-221ENST00000627317 PCYOX1Q9UHG3 505 aa14.75□□□□□ -0.05
PNKP-221ENST00000627317 PPIL1Q9Y3C6 166 aa14.75□□□□□ -0.05
PNKP-221ENST00000627317 PI4KAP42356 2102 aa14.75□□□□□ -0.05
PNKP-221ENST00000627317 A0A1B0GVT2 93 aa14.74□□□□□ -0.05
PNKP-221ENST00000627317 LOC285095A0A1B0GVY8 99 aa14.74□□□□□ -0.05
PNKP-221ENST00000627317 IGLON5A6NGN9 336 aa14.74□□□□□ -0.05
PNKP-221ENST00000627317 NPIPB15A6NHN6 443 aaPredicted RBP14.74□□□□□ -0.05
PNKP-221ENST00000627317 ERI2A8K979 691 aaKnown RBP14.74□□□□□ -0.05
PNKP-221ENST00000627317 A8MX80 341 aa14.74□□□□□ -0.05
PNKP-221ENST00000627317 MMP20O60882 483 aa14.74□□□□□ -0.05
PNKP-221ENST00000627317 AP2A1O95782 977 aa14.74□□□□□ -0.05
PNKP-221ENST00000627317 FGF1P05230 155 aa14.74□□□□□ -0.05
PNKP-221ENST00000627317 CEACAM1P13688 526 aa14.74□□□□□ -0.05
PNKP-221ENST00000627317 PMLP29590 882 aa14.74□□□□□ -0.05
PNKP-221ENST00000627317 HNF1BP35680 557 aa14.74□□□□□ -0.05
PNKP-221ENST00000627317 CHRNA4P43681 627 aa14.74□□□□□ -0.05
PNKP-221ENST00000627317 CSNK1EP49674 416 aaKnown RBP14.74□□□□□ -0.05
PNKP-221ENST00000627317 LIG3P49916 1009 aa14.74□□□□□ -0.05
PNKP-221ENST00000627317 DR1Q01658 176 aa14.74□□□□□ -0.05
PNKP-221ENST00000627317 C2orf54Q08AI8 447 aa14.74□□□□□ -0.05
PNKP-221ENST00000627317 RALGDSQ12967 914 aa14.74□□□□□ -0.05
PNKP-221ENST00000627317 SLC14A1Q13336 389 aa14.74□□□□□ -0.05
PNKP-221ENST00000627317 SEMA5AQ13591 1074 aa14.74□□□□□ -0.05
PNKP-221ENST00000627317 ARHGEF7Q14155 803 aa14.74□□□□□ -0.05
PNKP-221ENST00000627317 SPARCL1Q14515 664 aa14.74□□□□□ -0.05
PNKP-221ENST00000627317 SLC1A5Q15758 541 aa14.74□□□□□ -0.05
PNKP-221ENST00000627317 KIF19Q2TAC6 998 aa14.74□□□□□ -0.05
PNKP-221ENST00000627317 TMEM259Q4ZIN3 620 aa14.74□□□□□ -0.05
PNKP-221ENST00000627317 SIRPB2Q5JXA9 342 aa14.74□□□□□ -0.05
PNKP-221ENST00000627317 KLHDC8BQ8IXV7 354 aa14.74□□□□□ -0.05
PNKP-221ENST00000627317 PDCD7Q8N8D1 485 aaKnown RBP14.74□□□□□ -0.05
PNKP-221ENST00000627317 CCHCR1Q8TD31 782 aa14.74□□□□□ -0.05
PNKP-221ENST00000627317 KLK6Q92876 244 aa14.74□□□□□ -0.05
PNKP-221ENST00000627317 SLC6A18Q96N87 628 aa14.74□□□□□ -0.05
PNKP-221ENST00000627317 KRT12Q99456 494 aa14.74□□□□□ -0.05
PNKP-221ENST00000627317 APOL2Q9BQE5 337 aa14.74□□□□□ -0.05
PNKP-221ENST00000627317 ASIC3Q9UHC3 531 aa14.74□□□□□ -0.05
PNKP-221ENST00000627317 ZFR2Q9UPR6 939 aaKnown RBP14.74□□□□□ -0.05
PNKP-221ENST00000627317 WASF3Q9UPY6 502 aa14.74□□□□□ -0.05
PNKP-221ENST00000627317 FNDC3AQ9Y2H6 1198 aaKnown RBP14.74□□□□□ -0.05
PNKP-221ENST00000627317 MRFAP1Q9Y605 127 aa14.74□□□□□ -0.05
PNKP-221ENST00000627317 ASCC3Q8N3C0 2202 aaKnown RBP14.74□□□□□ -0.05
PNKP-221ENST00000627317 ACACBO00763 2458 aa14.73□□□□□ -0.05
PNKP-221ENST00000627317 TRPM6Q9BX84 2022 aa14.73□□□□□ -0.05
PNKP-221ENST00000627317 ASPMQ8IZT6 3477 aa14.73□□□□□ -0.05
PNKP-221ENST00000627317 EPG5Q9HCE0 2579 aa14.73□□□□□ -0.05
PNKP-221ENST00000627317 C1orf232A0A0U1RR37 186 aa14.73□□□□□ -0.05
PNKP-221ENST00000627317 A0A1W2PR77 199 aa14.73□□□□□ -0.05
PNKP-221ENST00000627317 WNT9AO14904 365 aa14.73□□□□□ -0.05
PNKP-221ENST00000627317 LZTS3O60299 673 aaPredicted RBP14.73□□□□□ -0.05
PNKP-221ENST00000627317 ZNF500O60304 480 aaPredicted RBP14.73□□□□□ -0.05
PNKP-221ENST00000627317 USP12O75317 370 aa14.73□□□□□ -0.05
PNKP-221ENST00000627317 TM7SF2O76062 418 aa14.73□□□□□ -0.05
PNKP-221ENST00000627317 HEXIM1O94992 359 aaKnown RBP14.73□□□□□ -0.05
PNKP-221ENST00000627317 AGTP01019 485 aa14.73□□□□□ -0.05
PNKP-221ENST00000627317 SLC4A1P02730 911 aa14.73□□□□□ -0.05
PNKP-221ENST00000627317 WNT1P04628 370 aa14.73□□□□□ -0.05
PNKP-221ENST00000627317 APRTP07741 180 aa14.73□□□□□ -0.05
PNKP-221ENST00000627317 ATXN1LP0C7T5 689 aaKnown RBP14.73□□□□□ -0.05
PNKP-221ENST00000627317 PIRTP0C851 137 aa14.73□□□□□ -0.05
PNKP-221ENST00000627317 ZNF883P0CG24 379 aa14.73□□□□□ -0.05
PNKP-221ENST00000627317 C6P13671 934 aa14.73□□□□□ -0.05
PNKP-221ENST00000627317 ADRA1AP35348 466 aa14.73□□□□□ -0.05
PNKP-221ENST00000627317 NUDT1P36639 197 aa14.73□□□□□ -0.05
PNKP-221ENST00000627317 ATXN3P54252 364 aaPredicted RBP14.73□□□□□ -0.05
PNKP-221ENST00000627317 RACK1P63244 317 aaKnown RBP14.73□□□□□ -0.05
PNKP-221ENST00000627317 SGCGQ13326 291 aa14.73□□□□□ -0.05
PNKP-221ENST00000627317 OLIG2Q13516 323 aa14.73□□□□□ -0.05
PNKP-221ENST00000627317 DHX34Q14147 1143 aaKnown RBP14.73□□□□□ -0.05
PNKP-221ENST00000627317 PTPRRQ15256 657 aa14.73□□□□□ -0.05
PNKP-221ENST00000627317 CNGA3Q16281 694 aa14.73□□□□□ -0.05
PNKP-221ENST00000627317 KCTD19Q17RG1 926 aaPredicted RBP14.73□□□□□ -0.05
PNKP-221ENST00000627317 ZNF284Q2VY69 593 aa14.73□□□□□ -0.05
PNKP-221ENST00000627317 HLA-BQ31612 363 aa14.73□□□□□ -0.05
PNKP-221ENST00000627317 DNTTIP2Q5QJE6 756 aaKnown RBP14.73□□□□□ -0.05
PNKP-221ENST00000627317 KCTD11Q693B1 232 aa14.73□□□□□ -0.05
PNKP-221ENST00000627317 NAPEPLDQ6IQ20 393 aa14.73□□□□□ -0.05
PNKP-221ENST00000627317 LIPIQ6XZB0 460 aa14.73□□□□□ -0.05
PNKP-221ENST00000627317 PPP1R21Q6ZMI0 780 aa14.73□□□□□ -0.05
PNKP-221ENST00000627317 SYDE1Q6ZW31 735 aaPredicted RBP14.73□□□□□ -0.05
PNKP-221ENST00000627317 ZNF572Q7Z3I7 529 aaPredicted RBP14.73□□□□□ -0.05
PNKP-221ENST00000627317 TSPAN33Q86UF1 283 aa14.73□□□□□ -0.05
PNKP-221ENST00000627317 MNS1Q8NEH6 495 aa14.73□□□□□ -0.05
PNKP-221ENST00000627317 DEFB124Q8NES8 71 aa14.73□□□□□ -0.05
PNKP-221ENST00000627317 SLCO2A1Q92959 643 aa14.73□□□□□ -0.05
PNKP-221ENST00000627317 SMIM14Q96QK8 99 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms