RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 SCINQ9Y6U3 715 aa3.35□□□□□ -1.87
VBP1-204ENST00000625964 LRRC53A6NM62 1247 aa3.34□□□□□ -1.87
VBP1-204ENST00000625964 ERI2A8K979 691 aaKnown RBP3.34□□□□□ -1.87
VBP1-204ENST00000625964 SEC14L5O43304 696 aa3.34□□□□□ -1.87
VBP1-204ENST00000625964 SEC31AO94979 1220 aaKnown RBP3.34□□□□□ -1.87
VBP1-204ENST00000625964 CLDN14O95500 239 aa3.34□□□□□ -1.87
VBP1-204ENST00000625964 PMS2P2O95744 297 aa3.34□□□□□ -1.87
VBP1-204ENST00000625964 HARS2P49590 506 aaKnown RBP3.34□□□□□ -1.87
VBP1-204ENST00000625964 KRTAP10-3P60369 221 aa3.34□□□□□ -1.87
VBP1-204ENST00000625964 PTP4A2Q12974 167 aa3.34□□□□□ -1.87
VBP1-204ENST00000625964 CTF1Q16619 201 aa3.34□□□□□ -1.87
VBP1-204ENST00000625964 EIF2S3LQ2VIR3 472 aaKnown RBP3.34□□□□□ -1.87
VBP1-204ENST00000625964 HIST2H2BDQ6DRA6 164 aa3.34□□□□□ -1.87
VBP1-204ENST00000625964 SLC36A4Q6YBV0 504 aa3.34□□□□□ -1.87
VBP1-204ENST00000625964 ARMC8Q8IUR7 673 aa3.34□□□□□ -1.87
VBP1-204ENST00000625964 RND1Q92730 232 aa3.34□□□□□ -1.87
VBP1-204ENST00000625964 TAF15Q92804 592 aaKnown RBP eCLIP3.34□□□□□ -1.87
VBP1-204ENST00000625964 ZUFSPQ96AP4 578 aa3.34□□□□□ -1.87
VBP1-204ENST00000625964 SAAL1Q96ER3 474 aa3.34□□□□□ -1.87
VBP1-204ENST00000625964 TBATAQ96M53 351 aa3.34□□□□□ -1.87
VBP1-204ENST00000625964 IL17FQ96PD4 163 aa3.34□□□□□ -1.87
VBP1-204ENST00000625964 ZNF385AQ96PM9 386 aaKnown RBP3.34□□□□□ -1.87
VBP1-204ENST00000625964 AGXT2Q9BYV1 514 aa3.34□□□□□ -1.87
VBP1-204ENST00000625964 PLEKHA4Q9H4M7 779 aa3.34□□□□□ -1.87
VBP1-204ENST00000625964 ESRP2Q9H6T0 727 aaKnown RBP3.34□□□□□ -1.87
VBP1-204ENST00000625964 C17orf75Q9HAS0 396 aa3.34□□□□□ -1.87
VBP1-204ENST00000625964 UBN1Q9NPG3 1134 aa3.34□□□□□ -1.87
VBP1-204ENST00000625964 MKKSQ9NPJ1 570 aaPredicted RBP3.34□□□□□ -1.87
VBP1-204ENST00000625964 C9orf78Q9NZ63 289 aaPredicted RBP3.34□□□□□ -1.87
VBP1-204ENST00000625964 SIX4Q9UIU6 781 aa3.34□□□□□ -1.87
VBP1-204ENST00000625964 AAR2Q9Y312 384 aaKnown RBP3.34□□□□□ -1.87
VBP1-204ENST00000625964 MAGEA13PA6NCF6 341 aa3.34□□□□□ -1.88
VBP1-204ENST00000625964 PLRG1O43660 514 aaKnown RBP3.34□□□□□ -1.88
VBP1-204ENST00000625964 BUB3O43684 328 aa3.34□□□□□ -1.88
VBP1-204ENST00000625964 TIPRLO75663 272 aa3.34□□□□□ -1.88
VBP1-204ENST00000625964 SERPINB2P05120 415 aa3.34□□□□□ -1.88
VBP1-204ENST00000625964 TAF6P49848 677 aa3.34□□□□□ -1.88
VBP1-204ENST00000625964 NLRP5P59047 1200 aa3.34□□□□□ -1.88
VBP1-204ENST00000625964 ECT2LQ008S8 904 aa3.34□□□□□ -1.88
VBP1-204ENST00000625964 POU3F1Q03052 451 aaPredicted RBP3.34□□□□□ -1.88
VBP1-204ENST00000625964 NAE1Q13564 534 aa3.34□□□□□ -1.88
VBP1-204ENST00000625964 TNFAIP1Q13829 316 aa3.34□□□□□ -1.88
VBP1-204ENST00000625964 OASLQ15646 514 aaKnown RBP3.34□□□□□ -1.88
VBP1-204ENST00000625964 C2orf68Q2NKX9 166 aa3.34□□□□□ -1.88
VBP1-204ENST00000625964 ZNF718Q3SXZ3 478 aa3.34□□□□□ -1.88
VBP1-204ENST00000625964 SLC45A4Q5BKX6 768 aa3.34□□□□□ -1.88
VBP1-204ENST00000625964 CCNI2Q6ZMN8 369 aaPredicted RBP3.34□□□□□ -1.88
VBP1-204ENST00000625964 QSOX2Q6ZRP7 698 aa3.34□□□□□ -1.88
VBP1-204ENST00000625964 NEK9Q8TD19 979 aa3.34□□□□□ -1.88
VBP1-204ENST00000625964 TANKQ92844 425 aa3.34□□□□□ -1.88
VBP1-204ENST00000625964 NDST4Q9H3R1 872 aa3.34□□□□□ -1.88
VBP1-204ENST00000625964 PCDHB16Q9NRJ7 776 aa3.34□□□□□ -1.88
VBP1-204ENST00000625964 SMARCAL1Q9NZC9 954 aa3.34□□□□□ -1.88
VBP1-204ENST00000625964 TINAGQ9UJW2 476 aa3.34□□□□□ -1.88
VBP1-204ENST00000625964 ERVK-11Q9UQG0 969 aa3.34□□□□□ -1.88
VBP1-204ENST00000625964 A0A1W2PQM1 296 aa3.33□□□□□ -1.88
VBP1-204ENST00000625964 HNRNPCL2B2RXH8 293 aa3.33□□□□□ -1.88
VBP1-204ENST00000625964 USP17L23D6RBM5 183 aa3.33□□□□□ -1.88
VBP1-204ENST00000625964 TAF4O00268 1085 aa3.33□□□□□ -1.88
VBP1-204ENST00000625964 DDNO94850 711 aaPredicted RBP3.33□□□□□ -1.88
VBP1-204ENST00000625964 LINC00271P0C7V0 271 aa3.33□□□□□ -1.88
VBP1-204ENST00000625964 CPOXP36551 454 aa3.33□□□□□ -1.88
VBP1-204ENST00000625964 EIF3BP55884 814 aaKnown RBP3.33□□□□□ -1.88
VBP1-204ENST00000625964 GSTA3Q16772 222 aa3.33□□□□□ -1.88
VBP1-204ENST00000625964 COL28A1Q2UY09 1125 aa3.33□□□□□ -1.88
VBP1-204ENST00000625964 FAM76BQ5HYJ3 339 aa3.33□□□□□ -1.88
VBP1-204ENST00000625964 ACAD10Q6JQN1 1059 aa3.33□□□□□ -1.88
VBP1-204ENST00000625964 KRBA2Q6ZNG9 492 aa3.33□□□□□ -1.88
VBP1-204ENST00000625964 TAOK1Q7L7X3 1001 aa3.33□□□□□ -1.88
VBP1-204ENST00000625964 CNTROBQ8N137 903 aa3.33□□□□□ -1.88
VBP1-204ENST00000625964 SPATA20Q8TB22 786 aa3.33□□□□□ -1.88
VBP1-204ENST00000625964 SECTM1Q8WVN6 248 aa3.33□□□□□ -1.88
VBP1-204ENST00000625964 HINT3Q9NQE9 182 aaKnown RBP3.33□□□□□ -1.88
VBP1-204ENST00000625964 SLC6A13Q9NSD5 602 aa3.33□□□□□ -1.88
VBP1-204ENST00000625964 MKLN1Q9UL63 735 aa3.33□□□□□ -1.88
VBP1-204ENST00000625964 KCNS2Q9ULS6 477 aa3.33□□□□□ -1.88
VBP1-204ENST00000625964 NAALADL1Q9UQQ1 740 aa3.33□□□□□ -1.88
VBP1-204ENST00000625964 VDAC3Q9Y277 283 aa3.33□□□□□ -1.88
VBP1-204ENST00000625964 PCDHAC2Q9Y5I4 1007 aa3.33□□□□□ -1.88
VBP1-204ENST00000625964 PSAT1Q9Y617 370 aa3.33□□□□□ -1.88
VBP1-204ENST00000625964 UTYO14607 1347 aa3.32□□□□□ -1.88
VBP1-204ENST00000625964 A0A1B0GVC2 190 aa3.32□□□□□ -1.88
VBP1-204ENST00000625964 MID1O15344 667 aa3.32□□□□□ -1.88
VBP1-204ENST00000625964 RFPL2O75678 378 aa3.32□□□□□ -1.88
VBP1-204ENST00000625964 HOXB5P09067 269 aa3.32□□□□□ -1.88
VBP1-204ENST00000625964 SRCP12931 536 aa3.32□□□□□ -1.88
VBP1-204ENST00000625964 ATP1A3P13637 1013 aa3.32□□□□□ -1.88
VBP1-204ENST00000625964 MAOAP21397 527 aa3.32□□□□□ -1.88
VBP1-204ENST00000625964 EPHA8P29322 1005 aaPredicted RBP3.32□□□□□ -1.88
VBP1-204ENST00000625964 CDAP32320 146 aa3.32□□□□□ -1.88
VBP1-204ENST00000625964 SEC61BP60468 96 aaKnown RBP3.32□□□□□ -1.88
VBP1-204ENST00000625964 ZNF155Q12901 538 aaPredicted RBP3.32□□□□□ -1.88
VBP1-204ENST00000625964 FGFBP1Q14512 234 aa3.32□□□□□ -1.88
VBP1-204ENST00000625964 ALG11Q2TAA5 492 aa3.32□□□□□ -1.88
VBP1-204ENST00000625964 ZNF672Q499Z4 452 aaPredicted RBP3.32□□□□□ -1.88
VBP1-204ENST00000625964 ALFQ53S48 1182 aa3.32□□□□□ -1.88
VBP1-204ENST00000625964 HSP90AB4PQ58FF6 505 aa3.32□□□□□ -1.88
VBP1-204ENST00000625964 WBP2NLQ6ICG8 309 aa3.32□□□□□ -1.88
VBP1-204ENST00000625964 RGMBQ6NW40 437 aa3.32□□□□□ -1.88
VBP1-204ENST00000625964 METTL2BQ6P1Q9 378 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms