RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 FAM110BQ8TC76 370 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 L3HYPDHQ96EM0 354 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 HIC2Q96JB3 615 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 C1orf74Q96LT6 269 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 TBATAQ96M53 351 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 TIPRLO75663 272 aa11.27□□□□□ -0.6
VARS2-213ENST00000625423 GPX3P22352 226 aa11.27□□□□□ -0.6
VARS2-213ENST00000625423 NDST2P52849 883 aa11.27□□□□□ -0.6
VARS2-213ENST00000625423 HERVK_113P63132 956 aa11.27□□□□□ -0.6
VARS2-213ENST00000625423 NRG1Q02297 640 aaPredicted RBP11.27□□□□□ -0.6
VARS2-213ENST00000625423 YWHAHQ04917 246 aaPredicted RBP11.27□□□□□ -0.6
VARS2-213ENST00000625423 LAMB3Q13751 1172 aa11.27□□□□□ -0.6
VARS2-213ENST00000625423 GEN1Q17RS7 908 aa11.27□□□□□ -0.6
VARS2-213ENST00000625423 UGT3A2Q3SY77 523 aa11.27□□□□□ -0.6
VARS2-213ENST00000625423 MS4A13Q5J8X5 152 aa11.27□□□□□ -0.6
VARS2-213ENST00000625423 DHFR2Q86XF0 187 aa11.27□□□□□ -0.6
VARS2-213ENST00000625423 PGBD5Q8N414 524 aa11.27□□□□□ -0.6
VARS2-213ENST00000625423 PBXIP1Q96AQ6 731 aa11.27□□□□□ -0.6
VARS2-213ENST00000625423 ERVK-6Q9BXR3 956 aa11.27□□□□□ -0.6
VARS2-213ENST00000625423 ZYG11BQ9C0D3 744 aa11.27□□□□□ -0.6
VARS2-213ENST00000625423 PRDM5Q9NQX1 630 aaPredicted RBP11.27□□□□□ -0.6
VARS2-213ENST00000625423 DMTF1Q9Y222 760 aa11.27□□□□□ -0.6
VARS2-213ENST00000625423 TLR6Q9Y2C9 796 aa11.27□□□□□ -0.6
VARS2-213ENST00000625423 DNAJC15Q9Y5T4 150 aa11.27□□□□□ -0.6
VARS2-213ENST00000625423 C9JVG2 144 aa11.27□□□□□ -0.61
VARS2-213ENST00000625423 NR5A2O00482 541 aa11.27□□□□□ -0.61
VARS2-213ENST00000625423 LDB2O43679 373 aa11.27□□□□□ -0.61
VARS2-213ENST00000625423 ZNF623O75123 536 aa11.27□□□□□ -0.61
VARS2-213ENST00000625423 CD1DP15813 335 aa11.27□□□□□ -0.61
VARS2-213ENST00000625423 CKMT2P17540 419 aa11.27□□□□□ -0.61
VARS2-213ENST00000625423 THPOP40225 353 aa11.27□□□□□ -0.61
VARS2-213ENST00000625423 GRIA3P42263 894 aa11.27□□□□□ -0.61
VARS2-213ENST00000625423 NR1H2P55055 460 aa11.27□□□□□ -0.61
VARS2-213ENST00000625423 FOXA1P55317 472 aa11.27□□□□□ -0.61
VARS2-213ENST00000625423 TBX4P57082 545 aa11.27□□□□□ -0.61
VARS2-213ENST00000625423 CREB5Q02930 508 aa11.27□□□□□ -0.61
VARS2-213ENST00000625423 MGAT3Q09327 533 aa11.27□□□□□ -0.61
VARS2-213ENST00000625423 DDR2Q16832 855 aa11.27□□□□□ -0.61
VARS2-213ENST00000625423 MAP7D1Q3KQU3 841 aa11.27□□□□□ -0.61
VARS2-213ENST00000625423 ZNF549Q6P9A3 640 aa11.27□□□□□ -0.61
VARS2-213ENST00000625423 GALNT7Q86SF2 657 aa11.27□□□□□ -0.61
VARS2-213ENST00000625423 ZNF683Q8IZ20 524 aa11.27□□□□□ -0.61
VARS2-213ENST00000625423 CLYBLQ8N0X4 340 aa11.27□□□□□ -0.61
VARS2-213ENST00000625423 PTGR2Q8N8N7 351 aaPredicted RBP11.27□□□□□ -0.61
VARS2-213ENST00000625423 DDI1Q8WTU0 396 aa11.27□□□□□ -0.61
VARS2-213ENST00000625423 CANT1Q8WVQ1 401 aa11.27□□□□□ -0.61
VARS2-213ENST00000625423 SLC39A13Q96H72 371 aa11.27□□□□□ -0.61
VARS2-213ENST00000625423 SUSD3Q96L08 255 aa11.27□□□□□ -0.61
VARS2-213ENST00000625423 TMEM79Q9BSE2 394 aa11.27□□□□□ -0.61
VARS2-213ENST00000625423 DDX18Q9NVP1 670 aaKnown RBP11.27□□□□□ -0.61
VARS2-213ENST00000625423 POLR3BQ9NW08 1133 aaPredicted RBP11.27□□□□□ -0.61
VARS2-213ENST00000625423 ARL5AQ9Y689 179 aa11.27□□□□□ -0.61
VARS2-213ENST00000625423 A0A0J9YYE9 177 aa11.27□□□□□ -0.61
VARS2-213ENST00000625423 H0YJX3 145 aa11.27□□□□□ -0.61
VARS2-213ENST00000625423 CDK14O94921 469 aa11.27□□□□□ -0.61
VARS2-213ENST00000625423 ASLP04424 464 aa11.27□□□□□ -0.61
VARS2-213ENST00000625423 ATXN1LP0C7T5 689 aaKnown RBP11.27□□□□□ -0.61
VARS2-213ENST00000625423 SLC2A3P11169 496 aa11.27□□□□□ -0.61
VARS2-213ENST00000625423 RHOQP17081 205 aa11.27□□□□□ -0.61
VARS2-213ENST00000625423 ACADVLP49748 655 aa11.27□□□□□ -0.61
VARS2-213ENST00000625423 CLCN2P51788 898 aa11.27□□□□□ -0.61
VARS2-213ENST00000625423 TXNL4AP83876 142 aaKnown RBP11.27□□□□□ -0.61
VARS2-213ENST00000625423 CIR1Q86X95 450 aaPredicted RBP11.27□□□□□ -0.61
VARS2-213ENST00000625423 RIN3Q8TB24 985 aa11.27□□□□□ -0.61
VARS2-213ENST00000625423 ARRDC2Q8TBH0 407 aa11.27□□□□□ -0.61
VARS2-213ENST00000625423 GRIN3AQ8TCU5 1115 aa11.27□□□□□ -0.61
VARS2-213ENST00000625423 BLOC1S5Q8TDH9 187 aa11.27□□□□□ -0.61
VARS2-213ENST00000625423 ADAM2Q99965 735 aa11.27□□□□□ -0.61
VARS2-213ENST00000625423 MTG1Q9BT17 334 aaPredicted RBP11.27□□□□□ -0.61
VARS2-213ENST00000625423 OSBPL11Q9BXB4 747 aa11.27□□□□□ -0.61
VARS2-213ENST00000625423 MID1IP1Q9NPA3 183 aa11.27□□□□□ -0.61
VARS2-213ENST00000625423 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.27□□□□□ -0.61
VARS2-213ENST00000625423 A0A0U1RQF3 1178 aa11.26□□□□□ -0.61
VARS2-213ENST00000625423 H3BSA7 217 aa11.26□□□□□ -0.61
VARS2-213ENST00000625423 UBXN8O00124 270 aa11.26□□□□□ -0.61
VARS2-213ENST00000625423 TBX18O95935 607 aa11.26□□□□□ -0.61
VARS2-213ENST00000625423 GOT2P00505 430 aaKnown RBP11.26□□□□□ -0.61
VARS2-213ENST00000625423 ATP6V1B2P21281 511 aa11.26□□□□□ -0.61
VARS2-213ENST00000625423 ATP4BP51164 291 aa11.26□□□□□ -0.61
VARS2-213ENST00000625423 TIAL1Q01085 375 aaKnown RBP eCLIP11.26□□□□□ -0.61
VARS2-213ENST00000625423 EFEMP1Q12805 493 aa11.26□□□□□ -0.61
VARS2-213ENST00000625423 PFKFB4Q16877 469 aa11.26□□□□□ -0.61
VARS2-213ENST00000625423 VPS26BQ4G0F5 336 aa11.26□□□□□ -0.61
VARS2-213ENST00000625423 HACD2Q6Y1H2 254 aa11.26□□□□□ -0.61
VARS2-213ENST00000625423 SERINC5Q86VE9 423 aa11.26□□□□□ -0.61
VARS2-213ENST00000625423 IGSF8Q969P0 613 aa11.26□□□□□ -0.61
VARS2-213ENST00000625423 DUS3LQ96G46 650 aaKnown RBP11.26□□□□□ -0.61
VARS2-213ENST00000625423 ZNF512Q96ME7 567 aaPredicted RBP11.26□□□□□ -0.61
VARS2-213ENST00000625423 NSUN5Q96P11 429 aaKnown RBP11.26□□□□□ -0.61
VARS2-213ENST00000625423 KCNA7Q96RP8 456 aa11.26□□□□□ -0.61
VARS2-213ENST00000625423 EFHD1Q9BUP0 239 aa11.26□□□□□ -0.61
VARS2-213ENST00000625423 TMEM248Q9NWD8 314 aa11.26□□□□□ -0.61
VARS2-213ENST00000625423 FNIP2Q9P278 1114 aa11.26□□□□□ -0.61
VARS2-213ENST00000625423 MAP10Q9P2G4 905 aa11.26□□□□□ -0.61
VARS2-213ENST00000625423 PIP5K1BO14986 540 aa11.26□□□□□ -0.61
VARS2-213ENST00000625423 AKAP10O43572 662 aa11.26□□□□□ -0.61
VARS2-213ENST00000625423 PIRTP0C851 137 aa11.26□□□□□ -0.61
VARS2-213ENST00000625423 HSPA8P11142 646 aaKnown RBP11.26□□□□□ -0.61
VARS2-213ENST00000625423 AKR1A1P14550 325 aa11.26□□□□□ -0.61
VARS2-213ENST00000625423 FDXRP22570 491 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms