RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 IL10RBQ08334 325 aa12.72□□□□□ -0.37
PNKP-217ENST00000625216 ELP6Q0PNE2 266 aa12.72□□□□□ -0.37
PNKP-217ENST00000625216 GALNT2Q10471 571 aa12.72□□□□□ -0.37
PNKP-217ENST00000625216 XRCC4Q13426 336 aa12.72□□□□□ -0.37
PNKP-217ENST00000625216 PRKD1Q15139 912 aaPredicted RBP12.72□□□□□ -0.37
PNKP-217ENST00000625216 PPP1R7Q15435 360 aa12.72□□□□□ -0.37
PNKP-217ENST00000625216 TRIP13Q15645 432 aaPredicted RBP12.72□□□□□ -0.37
PNKP-217ENST00000625216 SMAD1Q15797 465 aaKnown RBP12.72□□□□□ -0.37
PNKP-217ENST00000625216 FAM182AQ5T1J6 154 aa12.72□□□□□ -0.37
PNKP-217ENST00000625216 DARS2Q6PI48 645 aaKnown RBP12.72□□□□□ -0.37
PNKP-217ENST00000625216 BRAT1Q6PJG6 821 aa12.72□□□□□ -0.37
PNKP-217ENST00000625216 SYDE1Q6ZW31 735 aaPredicted RBP12.72□□□□□ -0.37
PNKP-217ENST00000625216 TMPRSS12Q86WS5 348 aa12.72□□□□□ -0.37
PNKP-217ENST00000625216 ZNF599Q96NL3 588 aa12.72□□□□□ -0.37
PNKP-217ENST00000625216 KLF6Q99612 283 aaPredicted RBP12.72□□□□□ -0.37
PNKP-217ENST00000625216 ERP44Q9BS26 406 aa12.72□□□□□ -0.37
PNKP-217ENST00000625216 RAB17Q9H0T7 212 aa12.72□□□□□ -0.37
PNKP-217ENST00000625216 SP110Q9HB58 689 aa12.72□□□□□ -0.37
PNKP-217ENST00000625216 PCDH9Q9HC56 1237 aa12.72□□□□□ -0.37
PNKP-217ENST00000625216 GRHL1Q9NZI5 618 aa12.72□□□□□ -0.37
PNKP-217ENST00000625216 IPO11Q9UI26 975 aaKnown RBP12.72□□□□□ -0.37
PNKP-217ENST00000625216 FRYQ5TBA9 3013 aa12.72□□□□□ -0.37
PNKP-217ENST00000625216 SPTY2D1-AS1A0A0U1RR47 76 aa12.71□□□□□ -0.37
PNKP-217ENST00000625216 TSPAN11A1L157 253 aa12.71□□□□□ -0.37
PNKP-217ENST00000625216 POM121BA6NF01 834 aa12.71□□□□□ -0.37
PNKP-217ENST00000625216 NEMP2A6NFY4 417 aa12.71□□□□□ -0.37
PNKP-217ENST00000625216 HACD1B0YJ81 288 aa12.71□□□□□ -0.37
PNKP-217ENST00000625216 DFFAO00273 331 aa12.71□□□□□ -0.37
PNKP-217ENST00000625216 RAD51BO15315 384 aa12.71□□□□□ -0.37
PNKP-217ENST00000625216 SPINT1O43278 529 aa12.71□□□□□ -0.37
PNKP-217ENST00000625216 RFPL3O75679 317 aa12.71□□□□□ -0.37
PNKP-217ENST00000625216 TM7SF2O76062 418 aa12.71□□□□□ -0.37
PNKP-217ENST00000625216 CKMT2P17540 419 aa12.71□□□□□ -0.37
PNKP-217ENST00000625216 DGKAP23743 735 aa12.71□□□□□ -0.37
PNKP-217ENST00000625216 IVDP26440 423 aa12.71□□□□□ -0.37
PNKP-217ENST00000625216 ECHS1P30084 290 aa12.71□□□□□ -0.37
PNKP-217ENST00000625216 CARSP49589 748 aaKnown RBP12.71□□□□□ -0.37
PNKP-217ENST00000625216 VPS41P49754 854 aa12.71□□□□□ -0.37
PNKP-217ENST00000625216 PFN3P60673 137 aa12.71□□□□□ -0.37
PNKP-217ENST00000625216 YPEL5P62699 121 aa12.71□□□□□ -0.37
PNKP-217ENST00000625216 UGP2Q16851 508 aa12.71□□□□□ -0.37
PNKP-217ENST00000625216 TMEM52BQ4KMG9 183 aa12.71□□□□□ -0.37
PNKP-217ENST00000625216 CFAP58Q5T655 872 aa12.71□□□□□ -0.37
PNKP-217ENST00000625216 FBXO38Q6PIJ6 1188 aa12.71□□□□□ -0.37
PNKP-217ENST00000625216 GSTA5Q7RTV2 222 aa12.71□□□□□ -0.37
PNKP-217ENST00000625216 PTAR1Q7Z6K3 402 aaPredicted RBP12.71□□□□□ -0.37
PNKP-217ENST00000625216 SRLQ86TD4 932 aa12.71□□□□□ -0.37
PNKP-217ENST00000625216 SLC22A18ASQ8N1D0 253 aa12.71□□□□□ -0.37
PNKP-217ENST00000625216 SLC25A45Q8N413 288 aa12.71□□□□□ -0.37
PNKP-217ENST00000625216 FAM71DQ8N9W8 422 aa12.71□□□□□ -0.37
PNKP-217ENST00000625216 CXorf40AQ8TE69 158 aa12.71□□□□□ -0.37
PNKP-217ENST00000625216 CENPTQ96BT3 561 aa12.71□□□□□ -0.37
PNKP-217ENST00000625216 RTP4Q96DX8 246 aa12.71□□□□□ -0.37
PNKP-217ENST00000625216 LGMNQ99538 433 aa12.71□□□□□ -0.37
PNKP-217ENST00000625216 ATP13A3Q9H7F0 1226 aa12.71□□□□□ -0.37
PNKP-217ENST00000625216 USP29Q9HBJ7 922 aa12.71□□□□□ -0.37
PNKP-217ENST00000625216 SEPT3Q9UH03 358 aa12.71□□□□□ -0.37
PNKP-217ENST00000625216 ASIC3Q9UHC3 531 aa12.71□□□□□ -0.37
PNKP-217ENST00000625216 ZMIZ1Q9ULJ6 1067 aa12.71□□□□□ -0.37
PNKP-217ENST00000625216 SNX24Q9Y343 169 aa12.71□□□□□ -0.37
PNKP-217ENST00000625216 UTP11Q9Y3A2 253 aaKnown RBP12.71□□□□□ -0.37
PNKP-217ENST00000625216 PLXNA2O75051 1894 aa12.71□□□□□ -0.37
PNKP-217ENST00000625216 KMT2BQ9UMN6 2715 aaPredicted RBP12.7□□□□□ -0.38
PNKP-217ENST00000625216 USP24Q9UPU5 2620 aa12.7□□□□□ -0.38
PNKP-217ENST00000625216 CFAP69A5D8W1 941 aa12.7□□□□□ -0.38
PNKP-217ENST00000625216 PPP1R12AO14974 1030 aaPredicted RBP12.7□□□□□ -0.38
PNKP-217ENST00000625216 INSIG1O15503 277 aa12.7□□□□□ -0.38
PNKP-217ENST00000625216 KCNN4O15554 427 aa12.7□□□□□ -0.38
PNKP-217ENST00000625216 MMP20O60882 483 aa12.7□□□□□ -0.38
PNKP-217ENST00000625216 PIAS2O75928 621 aa12.7□□□□□ -0.38
PNKP-217ENST00000625216 IFNB1P01574 187 aa12.7□□□□□ -0.38
PNKP-217ENST00000625216 CSF2P04141 144 aa12.7□□□□□ -0.38
PNKP-217ENST00000625216 ALPPL2P10696 532 aa12.7□□□□□ -0.38
PNKP-217ENST00000625216 SERPINA4P29622 427 aa12.7□□□□□ -0.38
PNKP-217ENST00000625216 RPL22P35268 128 aaKnown RBP12.7□□□□□ -0.38
PNKP-217ENST00000625216 HSPA9P38646 679 aaKnown RBP12.7□□□□□ -0.38
PNKP-217ENST00000625216 ACADVLP49748 655 aa12.7□□□□□ -0.38
PNKP-217ENST00000625216 POLR2LP62875 67 aaKnown RBP12.7□□□□□ -0.38
PNKP-217ENST00000625216 BCL2L1Q07817 233 aa12.7□□□□□ -0.38
PNKP-217ENST00000625216 PPIDQ08752 370 aaKnown RBP12.7□□□□□ -0.38
PNKP-217ENST00000625216 PTK2BQ14289 1009 aa12.7□□□□□ -0.38
PNKP-217ENST00000625216 PDK1Q15118 436 aa12.7□□□□□ -0.38
PNKP-217ENST00000625216 PROX2Q3B8N5 592 aa12.7□□□□□ -0.38
PNKP-217ENST00000625216 ERAP2Q6P179 960 aa12.7□□□□□ -0.38
PNKP-217ENST00000625216 ZDHHC24Q6UX98 284 aa12.7□□□□□ -0.38
PNKP-217ENST00000625216 ARHGAP36Q6ZRI8 547 aa12.7□□□□□ -0.38
PNKP-217ENST00000625216 BZW1Q7L1Q6 419 aaKnown RBP12.7□□□□□ -0.38
PNKP-217ENST00000625216 PARGQ86W56 976 aa12.7□□□□□ -0.38
PNKP-217ENST00000625216 LRRC49Q8IUZ0 686 aa12.7□□□□□ -0.38
PNKP-217ENST00000625216 IFT20Q8IY31 132 aa12.7□□□□□ -0.38
PNKP-217ENST00000625216 TSEN2Q8NCE0 465 aaKnown RBP12.7□□□□□ -0.38
PNKP-217ENST00000625216 OR4C6Q8NH72 309 aa12.7□□□□□ -0.38
PNKP-217ENST00000625216 TFB1MQ8WVM0 346 aaKnown RBP12.7□□□□□ -0.38
PNKP-217ENST00000625216 ZCCHC14Q8WYQ9 949 aaKnown RBP12.7□□□□□ -0.38
PNKP-217ENST00000625216 HDAC11Q96DB2 347 aa12.7□□□□□ -0.38
PNKP-217ENST00000625216 EXOC2Q96KP1 924 aa12.7□□□□□ -0.38
PNKP-217ENST00000625216 PSKH2Q96QS6 385 aa12.7□□□□□ -0.38
PNKP-217ENST00000625216 DUSP23Q9BVJ7 150 aa12.7□□□□□ -0.38
PNKP-217ENST00000625216 CINPQ9BW66 212 aaPredicted RBP12.7□□□□□ -0.38
PNKP-217ENST00000625216 FEZ2Q9UHY8 353 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms