RNA–Protein interactions for RNA: ENST00000622960.1

ATRX-208, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-208ENST00000622960 CCDC3Q9BQI4 270 aa13.08□□□□□ -0.32
ATRX-208ENST00000622960 CYP4F12Q9HCS2 524 aa13.08□□□□□ -0.32
ATRX-208ENST00000622960 INTUQ9ULD6 942 aa13.08□□□□□ -0.32
ATRX-208ENST00000622960 GPSM3Q9Y4H4 160 aa13.08□□□□□ -0.32
ATRX-208ENST00000622960 HEY1Q9Y5J3 304 aa13.08□□□□□ -0.32
ATRX-208ENST00000622960 LRRK1Q38SD2 2015 aa13.08□□□□□ -0.32
ATRX-208ENST00000622960 LY6G6EA0A0G2JKS1 128 aa13.07□□□□□ -0.32
ATRX-208ENST00000622960 PRSS38A1L453 326 aa13.07□□□□□ -0.32
ATRX-208ENST00000622960 NPIPB15A6NHN6 443 aaPredicted RBP13.07□□□□□ -0.32
ATRX-208ENST00000622960 ZNF487B1APH4 448 aa13.07□□□□□ -0.32
ATRX-208ENST00000622960 BRINP1O60477 761 aa13.07□□□□□ -0.32
ATRX-208ENST00000622960 MAP3K6O95382 1288 aa13.07□□□□□ -0.32
ATRX-208ENST00000622960 TNNT1P13805 278 aa13.07□□□□□ -0.32
ATRX-208ENST00000622960 CTPS1P17812 591 aa13.07□□□□□ -0.32
ATRX-208ENST00000622960 IL4RP24394 825 aa13.07□□□□□ -0.32
ATRX-208ENST00000622960 NOP2P46087 812 aaKnown RBP13.07□□□□□ -0.32
ATRX-208ENST00000622960 GPR1P46091 355 aa13.07□□□□□ -0.32
ATRX-208ENST00000622960 ARSEP51690 589 aa13.07□□□□□ -0.32
ATRX-208ENST00000622960 RPL26P61254 145 aaKnown RBP13.07□□□□□ -0.32
ATRX-208ENST00000622960 GABREP78334 506 aa13.07□□□□□ -0.32
ATRX-208ENST00000622960 ILF3Q12906 894 aaKnown RBP eCLIP13.07□□□□□ -0.322e-8■■■■□ 25.6
ATRX-208ENST00000622960 SPA17Q15506 151 aa13.07□□□□□ -0.32
ATRX-208ENST00000622960 ASTE1Q2TB18 679 aaPredicted RBP13.07□□□□□ -0.32
ATRX-208ENST00000622960 CDCP2Q5VXM1 449 aa13.07□□□□□ -0.32
ATRX-208ENST00000622960 C19orf48Q6RUI8 117 aa13.07□□□□□ -0.32
ATRX-208ENST00000622960 CRTC1Q6UUV9 634 aa13.07□□□□□ -0.32
ATRX-208ENST00000622960 BZW1Q7L1Q6 419 aaKnown RBP13.07□□□□□ -0.32
ATRX-208ENST00000622960 HEATR4Q86WZ0 1026 aa13.07□□□□□ -0.32
ATRX-208ENST00000622960 RFX6Q8HWS3 928 aa13.07□□□□□ -0.32
ATRX-208ENST00000622960 KYQ8NBH2 561 aa13.07□□□□□ -0.32
ATRX-208ENST00000622960 FAM46DQ8NEK8 389 aa13.07□□□□□ -0.32
ATRX-208ENST00000622960 MAML1Q92585 1016 aa13.07□□□□□ -0.32
ATRX-208ENST00000622960 FGF11Q92914 225 aa13.07□□□□□ -0.32
ATRX-208ENST00000622960 FAF2Q96CS3 445 aa13.07□□□□□ -0.32
ATRX-208ENST00000622960 RNF157Q96PX1 679 aa13.07□□□□□ -0.32
ATRX-208ENST00000622960 MCCC1Q96RQ3 725 aaPredicted RBP13.07□□□□□ -0.32
ATRX-208ENST00000622960 CHP1Q99653 195 aa13.07□□□□□ -0.32
ATRX-208ENST00000622960 ADGRE3Q9BY15 652 aa13.07□□□□□ -0.32
ATRX-208ENST00000622960 GSDMCQ9BYG8 508 aa13.07□□□□□ -0.32
ATRX-208ENST00000622960 CLPBQ9H078 707 aa13.07□□□□□ -0.32
ATRX-208ENST00000622960 DPEP2Q9H4A9 486 aa13.07□□□□□ -0.32
ATRX-208ENST00000622960 SUDS3Q9H7L9 328 aaPredicted RBP13.07□□□□□ -0.32
ATRX-208ENST00000622960 CARS2Q9HA77 564 aaKnown RBP13.07□□□□□ -0.32
ATRX-208ENST00000622960 THSD1Q9NS62 852 aa13.07□□□□□ -0.32
ATRX-208ENST00000622960 RPL26L1Q9UNX3 145 aaKnown RBP13.07□□□□□ -0.32
ATRX-208ENST00000622960 U3KQA8 63 aa13.07□□□□□ -0.32
ATRX-208ENST00000622960 A0A087WV48 116 aa13.06□□□□□ -0.32
ATRX-208ENST00000622960 TMEM202A6NGA9 273 aa13.06□□□□□ -0.32
ATRX-208ENST00000622960 CAPN8A6NHC0 703 aa13.06□□□□□ -0.32
ATRX-208ENST00000622960 B4DGG1 531 aa13.06□□□□□ -0.32
ATRX-208ENST00000622960 TMX2-CTNND1H3BSU7 103 aa13.06□□□□□ -0.32
ATRX-208ENST00000622960 MTA2O94776 668 aa13.06□□□□□ -0.32
ATRX-208ENST00000622960 TGM2P21980 687 aa13.06□□□□□ -0.32
ATRX-208ENST00000622960 RBMS1P29558 406 aaKnown RBP13.06□□□□□ -0.32
ATRX-208ENST00000622960 CYLC1P35663 651 aaPredicted RBP13.06□□□□□ -0.32
ATRX-208ENST00000622960 TRIM23P36406 574 aa13.06□□□□□ -0.32
ATRX-208ENST00000622960 ETV3P41162 512 aa13.06□□□□□ -0.32
ATRX-208ENST00000622960 PCBP4P57723 403 aaKnown RBP13.06□□□□□ -0.32
ATRX-208ENST00000622960 DSC2Q02487 901 aa13.06□□□□□ -0.32
ATRX-208ENST00000622960 GBE1Q04446 702 aa13.06□□□□□ -0.32
ATRX-208ENST00000622960 AP1B1Q10567 949 aa13.06□□□□□ -0.32
ATRX-208ENST00000622960 PDK1Q15118 436 aa13.06□□□□□ -0.32
ATRX-208ENST00000622960 ISXQ2M1V0 245 aa13.06□□□□□ -0.32
ATRX-208ENST00000622960 COL28A1Q2UY09 1125 aa13.06□□□□□ -0.32
ATRX-208ENST00000622960 TBC1D25Q3MII6 688 aa13.06□□□□□ -0.32
ATRX-208ENST00000622960 C3orf38Q5JPI3 329 aa13.06□□□□□ -0.32
ATRX-208ENST00000622960 LRRC38Q5VT99 294 aa13.06□□□□□ -0.32
ATRX-208ENST00000622960 BROXQ5VW32 411 aa13.06□□□□□ -0.32
ATRX-208ENST00000622960 LRRC66Q68CR7 880 aa13.06□□□□□ -0.32
ATRX-208ENST00000622960 ALG1LQ6GMV1 187 aa13.06□□□□□ -0.32
ATRX-208ENST00000622960 LPCAT1Q8NF37 534 aa13.06□□□□□ -0.32
ATRX-208ENST00000622960 SNIP1Q8TAD8 396 aaKnown RBP13.06□□□□□ -0.32
ATRX-208ENST00000622960 CCHCR1Q8TD31 782 aa13.06□□□□□ -0.32
ATRX-208ENST00000622960 OR1E3Q8WZA6 343 aa13.06□□□□□ -0.32
ATRX-208ENST00000622960 AP2M1Q96CW1 435 aa13.06□□□□□ -0.32
ATRX-208ENST00000622960 ZNF578Q96N58 590 aaPredicted RBP13.06□□□□□ -0.32
ATRX-208ENST00000622960 GFM1Q96RP9 751 aaKnown RBP13.06□□□□□ -0.32
ATRX-208ENST00000622960 LGMNQ99538 433 aa13.06□□□□□ -0.32
ATRX-208ENST00000622960 TDRD1Q9BXT4 1180 aaKnown RBP13.06□□□□□ -0.32
ATRX-208ENST00000622960 STRADBQ9C0K7 418 aa13.06□□□□□ -0.32
ATRX-208ENST00000622960 BRD8Q9H0E9 1235 aa13.06□□□□□ -0.32
ATRX-208ENST00000622960 CDH19Q9H159 772 aa13.06□□□□□ -0.32
ATRX-208ENST00000622960 CAAP1Q9H8G2 361 aa13.06□□□□□ -0.32
ATRX-208ENST00000622960 POLR1BQ9H9Y6 1135 aa13.06□□□□□ -0.32
ATRX-208ENST00000622960 PCDH9Q9HC56 1237 aa13.06□□□□□ -0.32
ATRX-208ENST00000622960 FGF22Q9HCT0 170 aa13.06□□□□□ -0.32
ATRX-208ENST00000622960 DTLQ9NZJ0 730 aa13.06□□□□□ -0.32
ATRX-208ENST00000622960 PNMA8BQ9ULN7 279 aaPredicted RBP13.06□□□□□ -0.32
ATRX-208ENST00000622960 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.06□□□□□ -0.32
ATRX-208ENST00000622960 PCDHB1Q9Y5F3 818 aa13.06□□□□□ -0.32
ATRX-208ENST00000622960 A0A0J9YYE9 177 aa13.05□□□□□ -0.32
ATRX-208ENST00000622960 TRBC1P01850 177 aa13.05□□□□□ -0.32
ATRX-208ENST00000622960 MPOP05164 745 aa13.05□□□□□ -0.32
ATRX-208ENST00000622960 HLA-DQB2P05538 268 aa13.05□□□□□ -0.32
ATRX-208ENST00000622960 CELA2BP08218 269 aaPredicted RBP13.05□□□□□ -0.32
ATRX-208ENST00000622960 LHCGRP22888 699 aa13.05□□□□□ -0.32
ATRX-208ENST00000622960 TEAD1P28347 426 aa13.05□□□□□ -0.32
ATRX-208ENST00000622960 CDK3Q00526 305 aa13.05□□□□□ -0.32
ATRX-208ENST00000622960 TFDP2Q14188 446 aa13.05□□□□□ -0.32
ATRX-208ENST00000622960 CCDC70Q6NSX1 233 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms