RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 PTPRJQ12913 1337 aa16.16■□□□□ 0.18
GABRB3-215ENST00000622697 ATRNL1Q5VV63 1379 aa16.16■□□□□ 0.18
GABRB3-215ENST00000622697 PRKAR2AP13861 404 aaKnown RBP16.16■□□□□ 0.18
GABRB3-215ENST00000622697 ANXA11P50995 505 aaKnown RBP16.16■□□□□ 0.18
GABRB3-215ENST00000622697 ROR2Q01974 943 aaKnown RBP16.16■□□□□ 0.18
GABRB3-215ENST00000622697 ARMCX4Q5H9R4 360 aa16.16■□□□□ 0.18
GABRB3-215ENST00000622697 PERM1Q5SV97 790 aa16.16■□□□□ 0.18
GABRB3-215ENST00000622697 NIPA2Q8N8Q9 360 aa16.16■□□□□ 0.18
GABRB3-215ENST00000622697 MTMR14Q8NCE2 650 aa16.16■□□□□ 0.18
GABRB3-215ENST00000622697 HEXDCQ8WVB3 486 aa16.16■□□□□ 0.18
GABRB3-215ENST00000622697 REXO5Q96IC2 774 aaKnown RBP16.16■□□□□ 0.18
GABRB3-215ENST00000622697 RSL24D1Q9UHA3 163 aaKnown RBP16.16■□□□□ 0.18
GABRB3-215ENST00000622697 TRIM24O15164 1050 aa16.16■□□□□ 0.18
GABRB3-215ENST00000622697 OTCP00480 354 aa16.16■□□□□ 0.18
GABRB3-215ENST00000622697 AMHP03971 560 aa16.16■□□□□ 0.18
GABRB3-215ENST00000622697 PPP2R1BP30154 601 aa16.16■□□□□ 0.18
GABRB3-215ENST00000622697 KRT20P35900 424 aa16.16■□□□□ 0.18
GABRB3-215ENST00000622697 HPCAL1P37235 193 aa16.16■□□□□ 0.18
GABRB3-215ENST00000622697 HNF4AP41235 474 aa16.16■□□□□ 0.18
GABRB3-215ENST00000622697 CXCR3P49682 368 aa16.16■□□□□ 0.18
GABRB3-215ENST00000622697 PSEN1P49768 467 aa16.16■□□□□ 0.18
GABRB3-215ENST00000622697 C1DQ13901 141 aaKnown RBP16.16■□□□□ 0.18
GABRB3-215ENST00000622697 SLC9B1Q4ZJI4 515 aa16.16■□□□□ 0.18
GABRB3-215ENST00000622697 PAOXQ6QHF9 649 aa16.16■□□□□ 0.18
GABRB3-215ENST00000622697 SCAMP5Q8TAC9 235 aa16.16■□□□□ 0.18
GABRB3-215ENST00000622697 TWIST2Q8WVJ9 160 aa16.16■□□□□ 0.18
GABRB3-215ENST00000622697 NOL6Q9H6R4 1146 aaKnown RBP16.16■□□□□ 0.18
GABRB3-215ENST00000622697 NKX1-2Q9UD57 310 aaPredicted RBP16.16■□□□□ 0.18
GABRB3-215ENST00000622697 TCAF1Q9Y4C2 921 aa16.16■□□□□ 0.18
GABRB3-215ENST00000622697 COMMD3-BMI1R4GMX3 469 aa16.16■□□□□ 0.18
GABRB3-215ENST00000622697 RNASEH1O60930 286 aaKnown RBP16.16■□□□□ 0.18
GABRB3-215ENST00000622697 TOP3BO95985 862 aaKnown RBP16.16■□□□□ 0.18
GABRB3-215ENST00000622697 ATP6V0D1P61421 351 aa16.16■□□□□ 0.18
GABRB3-215ENST00000622697 BNIP2Q12982 314 aa16.16■□□□□ 0.18
GABRB3-215ENST00000622697 SLCO2A1Q92959 643 aa16.16■□□□□ 0.18
GABRB3-215ENST00000622697 HMCESQ96FZ2 354 aa16.16■□□□□ 0.18
GABRB3-215ENST00000622697 GPR21Q99679 349 aa16.16■□□□□ 0.18
GABRB3-215ENST00000622697 AHSPQ9NZD4 102 aa16.16■□□□□ 0.18
GABRB3-215ENST00000622697 SNTNA6NMZ2 147 aa16.15■□□□□ 0.18
GABRB3-215ENST00000622697 MAP3K13O43283 966 aa16.15■□□□□ 0.18
GABRB3-215ENST00000622697 POLR2EP19388 210 aaKnown RBP16.15■□□□□ 0.18
GABRB3-215ENST00000622697 AQP4P55087 323 aa16.15■□□□□ 0.18
GABRB3-215ENST00000622697 SPIDRQ14159 915 aa16.15■□□□□ 0.18
GABRB3-215ENST00000622697 DGUOKQ16854 277 aa16.15■□□□□ 0.18
GABRB3-215ENST00000622697 TMEM198Q66K66 360 aa16.15■□□□□ 0.18
GABRB3-215ENST00000622697 OOSP2Q86WS3 158 aa16.15■□□□□ 0.18
GABRB3-215ENST00000622697 CORO1BQ9BR76 489 aa16.15■□□□□ 0.18
GABRB3-215ENST00000622697 SMIM31A0A1B0GVY4 71 aa16.15■□□□□ 0.18
GABRB3-215ENST00000622697 ARL5CA6NH57 179 aa16.15■□□□□ 0.18
GABRB3-215ENST00000622697 CYP2A6P11509 494 aaPredicted RBP16.15■□□□□ 0.18
GABRB3-215ENST00000622697 ST13P50502 369 aaKnown RBP16.15■□□□□ 0.18
GABRB3-215ENST00000622697 POLR2LP62875 67 aaKnown RBP16.15■□□□□ 0.18
GABRB3-215ENST00000622697 TRAF3Q13114 568 aa16.15■□□□□ 0.18
GABRB3-215ENST00000622697 INTS6LQ5JSJ4 861 aaKnown RBP16.15■□□□□ 0.18
GABRB3-215ENST00000622697 ARMC4Q5T2S8 1044 aa16.15■□□□□ 0.18
GABRB3-215ENST00000622697 ZCCHC8Q6NZY4 707 aaKnown RBP16.15■□□□□ 0.18
GABRB3-215ENST00000622697 VN1R5Q7Z5H4 357 aa16.15■□□□□ 0.18
GABRB3-215ENST00000622697 CMASQ8NFW8 434 aaPredicted RBP16.15■□□□□ 0.18
GABRB3-215ENST00000622697 EBF3Q9H4W6 596 aa16.15■□□□□ 0.18
GABRB3-215ENST00000622697 CLK4Q9HAZ1 481 aaKnown RBP16.15■□□□□ 0.18
GABRB3-215ENST00000622697 GMPPBQ9Y5P6 360 aa16.15■□□□□ 0.18
GABRB3-215ENST00000622697 DAOAP59103 153 aa16.15■□□□□ 0.18
GABRB3-215ENST00000622697 ILF2Q12905 390 aaKnown RBP16.15■□□□□ 0.18
GABRB3-215ENST00000622697 XKR6Q5GH73 641 aa16.15■□□□□ 0.18
GABRB3-215ENST00000622697 BROXQ5VW32 411 aa16.15■□□□□ 0.18
GABRB3-215ENST00000622697 ADAMTSL2Q86TH1 951 aa16.15■□□□□ 0.18
GABRB3-215ENST00000622697 BORCS6Q96GS4 357 aa16.15■□□□□ 0.18
GABRB3-215ENST00000622697 GPR88Q9GZN0 384 aa16.15■□□□□ 0.18
GABRB3-215ENST00000622697 ATP13A3Q9H7F0 1226 aa16.15■□□□□ 0.18
GABRB3-215ENST00000622697 TTC24A2A3L6 582 aaPredicted RBP16.15■□□□□ 0.18
GABRB3-215ENST00000622697 NEMP2A6NFY4 417 aa16.15■□□□□ 0.18
GABRB3-215ENST00000622697 H3BMM5 538 aa16.15■□□□□ 0.18
GABRB3-215ENST00000622697 SNRPD1P62314 119 aaKnown RBP16.15■□□□□ 0.18
GABRB3-215ENST00000622697 FNDC3BQ53EP0 1204 aaKnown RBP16.15■□□□□ 0.18
GABRB3-215ENST00000622697 TTC23Q5W5X9 447 aa16.15■□□□□ 0.18
GABRB3-215ENST00000622697 DDX1Q92499 740 aaKnown RBP16.15■□□□□ 0.18
GABRB3-215ENST00000622697 MFHAS1Q9Y4C4 1052 aa16.15■□□□□ 0.18
GABRB3-215ENST00000622697 ADCY6O43306 1168 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 RPP40O75818 363 aaKnown RBP16.14■□□□□ 0.17
GABRB3-215ENST00000622697 PPM1LQ5SGD2 360 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 ZNF618Q5T7W0 954 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 LMO3Q8TAP4 145 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 LRTOMTQ8WZ04 291 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 CIDEBQ9UHD4 219 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 TCEA3O75764 348 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 VAV1P15498 845 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 CCNCP24863 283 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 INAQ16352 499 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 ALFQ53S48 1182 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 REP15Q6BDI9 236 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 FBXL19Q6PCT2 694 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 MTSS1LQ765P7 747 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 ZNF540Q8NDQ6 660 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 NLGN2Q8NFZ4 835 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 MAML3Q96JK9 1138 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 BTN2A3PQ96KV6 586 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 TSSK3Q96PN8 268 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 PANX1Q96RD7 426 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 GTF2A1LQ9UNN4 478 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 PCDHGC4Q9Y5F7 938 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms