RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 SEMA4BQ9NPR2 832 aaPredicted RBP15.79■□□□□ 0.12
NPHP4-211ENST00000622020 CMTM6Q9NX76 183 aa15.79■□□□□ 0.12
NPHP4-211ENST00000622020 J3QRK9 145 aa15.78■□□□□ 0.12
NPHP4-211ENST00000622020 HGFP14210 728 aa15.78■□□□□ 0.12
NPHP4-211ENST00000622020 IL10P22301 178 aa15.78■□□□□ 0.12
NPHP4-211ENST00000622020 DCLRE1AQ6PJP8 1040 aa15.78■□□□□ 0.12
NPHP4-211ENST00000622020 C14orf80Q86SX3 495 aa15.78■□□□□ 0.12
NPHP4-211ENST00000622020 TOP6BLQ8N6T0 577 aa15.78■□□□□ 0.12
NPHP4-211ENST00000622020 DPF3Q92784 378 aa15.78■□□□□ 0.12
NPHP4-211ENST00000622020 FBXL8Q96CD0 374 aa15.78■□□□□ 0.12
NPHP4-211ENST00000622020 FCRL5Q96RD9 977 aa15.78■□□□□ 0.12
NPHP4-211ENST00000622020 OSBPL6Q9BZF3 934 aa15.78■□□□□ 0.12
NPHP4-211ENST00000622020 MRPL40Q9NQ50 206 aaKnown RBP15.78■□□□□ 0.12
NPHP4-211ENST00000622020 TREX1Q9NSU2 369 aa15.78■□□□□ 0.12
NPHP4-211ENST00000622020 MIOSQ9NXC5 875 aa15.78■□□□□ 0.12
NPHP4-211ENST00000622020 IPO11Q9UI26 975 aaKnown RBP15.78■□□□□ 0.12
NPHP4-211ENST00000622020 PADI4Q9UM07 663 aa15.78■□□□□ 0.12
NPHP4-211ENST00000622020 LTBP3Q9NS15 1303 aa15.78■□□□□ 0.12
NPHP4-211ENST00000622020 SBF1O95248 1867 aa15.78■□□□□ 0.12
NPHP4-211ENST00000622020 SNAP29O95721 258 aa15.78■□□□□ 0.12
NPHP4-211ENST00000622020 PCNAP12004 261 aa15.78■□□□□ 0.12
NPHP4-211ENST00000622020 GPX3P22352 226 aa15.78■□□□□ 0.12
NPHP4-211ENST00000622020 PSMA4P25789 261 aaKnown RBP15.78■□□□□ 0.12
NPHP4-211ENST00000622020 HCAR3P49019 387 aa15.78■□□□□ 0.12
NPHP4-211ENST00000622020 KPNA2P52292 529 aaKnown RBP15.78■□□□□ 0.12
NPHP4-211ENST00000622020 TRAP1Q12931 704 aaKnown RBP15.78■□□□□ 0.12
NPHP4-211ENST00000622020 UNC50Q53HI1 259 aa15.78■□□□□ 0.12
NPHP4-211ENST00000622020 ISCA2Q86U28 154 aa15.78■□□□□ 0.12
NPHP4-211ENST00000622020 GPR180Q86V85 440 aa15.78■□□□□ 0.12
NPHP4-211ENST00000622020 CAMK1DQ8IU85 385 aa15.78■□□□□ 0.12
NPHP4-211ENST00000622020 PCYOX1LQ8NBM8 494 aa15.78■□□□□ 0.12
NPHP4-211ENST00000622020 MYLPFQ96A32 169 aa15.78■□□□□ 0.12
NPHP4-211ENST00000622020 C1orf50Q9BV19 199 aa15.78■□□□□ 0.12
NPHP4-211ENST00000622020 A0A087WXM4 84 aa15.78■□□□□ 0.12
NPHP4-211ENST00000622020 J3KR12 359 aa15.78■□□□□ 0.12
NPHP4-211ENST00000622020 FASP25445 335 aa15.78■□□□□ 0.12
NPHP4-211ENST00000622020 CCR1P32246 355 aa15.78■□□□□ 0.12
NPHP4-211ENST00000622020 ARL1P40616 181 aaPredicted RBP15.78■□□□□ 0.12
NPHP4-211ENST00000622020 DNAJB13P59910 316 aa15.78■□□□□ 0.12
NPHP4-211ENST00000622020 DSC2Q02487 901 aa15.78■□□□□ 0.12
NPHP4-211ENST00000622020 ATP1A4Q13733 1029 aa15.78■□□□□ 0.12
NPHP4-211ENST00000622020 UGT3A2Q3SY77 523 aa15.78■□□□□ 0.12
NPHP4-211ENST00000622020 ZNF678Q5SXM1 525 aa15.78■□□□□ 0.12
NPHP4-211ENST00000622020 BHLHA9Q7RTU4 235 aa15.78■□□□□ 0.12
NPHP4-211ENST00000622020 TEX37Q96LM6 180 aa15.78■□□□□ 0.12
NPHP4-211ENST00000622020 HBEGFQ99075 208 aa15.78■□□□□ 0.12
NPHP4-211ENST00000622020 ARMC7Q9H6L4 198 aa15.78■□□□□ 0.12
NPHP4-211ENST00000622020 MAGED1Q9Y5V3 778 aaPredicted RBP15.78■□□□□ 0.12
NPHP4-211ENST00000622020 F9P00740 461 aa15.77■□□□□ 0.12
NPHP4-211ENST00000622020 GFAPP14136 432 aa15.77■□□□□ 0.12
NPHP4-211ENST00000622020 FUT4P22083 530 aa15.77■□□□□ 0.12
NPHP4-211ENST00000622020 CCNCP24863 283 aa15.77■□□□□ 0.12
NPHP4-211ENST00000622020 MAGEA8P43361 318 aa15.77■□□□□ 0.12
NPHP4-211ENST00000622020 GEMP55040 296 aa15.77■□□□□ 0.12
NPHP4-211ENST00000622020 BEX3Q00994 111 aa15.77■□□□□ 0.12
NPHP4-211ENST00000622020 SDHAF4Q5VUM1 108 aa15.77■□□□□ 0.12
NPHP4-211ENST00000622020 RANBP10Q6VN20 620 aa15.77■□□□□ 0.12
NPHP4-211ENST00000622020 TWIST2Q8WVJ9 160 aa15.77■□□□□ 0.12
NPHP4-211ENST00000622020 TBATAQ96M53 351 aa15.77■□□□□ 0.12
NPHP4-211ENST00000622020 ZNF408Q9H9D4 720 aa15.77■□□□□ 0.12
NPHP4-211ENST00000622020 NDUFAF1Q9Y375 327 aa15.77■□□□□ 0.12
NPHP4-211ENST00000622020 PCDHGA4Q9Y5G9 962 aa15.77■□□□□ 0.12
NPHP4-211ENST00000622020 FADS3Q9Y5Q0 445 aa15.77■□□□□ 0.12
NPHP4-211ENST00000622020 COL1A2P08123 1366 aa15.77■□□□□ 0.12
NPHP4-211ENST00000622020 ARPC2O15144 300 aa15.77■□□□□ 0.11
NPHP4-211ENST00000622020 RBP1P09455 135 aa15.77■□□□□ 0.11
NPHP4-211ENST00000622020 IMPDH1P20839 514 aa15.77■□□□□ 0.11
NPHP4-211ENST00000622020 BRCC3P46736 316 aa15.77■□□□□ 0.11
NPHP4-211ENST00000622020 RAB39AQ14964 217 aa15.77■□□□□ 0.11
NPHP4-211ENST00000622020 ZNF792Q3KQV3 632 aa15.77■□□□□ 0.11
NPHP4-211ENST00000622020 AARS2Q5JTZ9 985 aaKnown RBP15.77■□□□□ 0.11
NPHP4-211ENST00000622020 SMYD5Q6GMV2 418 aa15.77■□□□□ 0.11
NPHP4-211ENST00000622020 ZNF554Q86TJ5 538 aa15.77■□□□□ 0.11
NPHP4-211ENST00000622020 ANKRD13AQ8IZ07 590 aa15.77■□□□□ 0.11
NPHP4-211ENST00000622020 LTB4R2Q9NPC1 389 aa15.77■□□□□ 0.11
NPHP4-211ENST00000622020 ENTPD7Q9NQZ7 604 aa15.77■□□□□ 0.11
NPHP4-211ENST00000622020 RGS18Q9NS28 235 aa15.77■□□□□ 0.11
NPHP4-211ENST00000622020 CCM2LQ9NUG4 571 aaPredicted RBP15.77■□□□□ 0.11
NPHP4-211ENST00000622020 TMLHEQ9NVH6 421 aa15.77■□□□□ 0.11
NPHP4-211ENST00000622020 FAM50BQ9Y247 325 aa15.77■□□□□ 0.11
NPHP4-211ENST00000622020 WDR90Q96KV7 1748 aa15.77■□□□□ 0.11
NPHP4-211ENST00000622020 GABRDO14764 452 aa15.76■□□□□ 0.11
NPHP4-211ENST00000622020 MATN3O15232 486 aa15.76■□□□□ 0.11
NPHP4-211ENST00000622020 CRCPO75575 148 aa15.76■□□□□ 0.11
NPHP4-211ENST00000622020 CDK14O94921 469 aa15.76■□□□□ 0.11
NPHP4-211ENST00000622020 CTSHP09668 335 aa15.76■□□□□ 0.11
NPHP4-211ENST00000622020 BMP2P12643 396 aa15.76■□□□□ 0.11
NPHP4-211ENST00000622020 ZNF182P17025 639 aaPredicted RBP15.76■□□□□ 0.11
NPHP4-211ENST00000622020 ELK4P28324 431 aa15.76■□□□□ 0.11
NPHP4-211ENST00000622020 SLC10A7Q0GE19 358 aa15.76■□□□□ 0.11
NPHP4-211ENST00000622020 IHHQ14623 411 aa15.76■□□□□ 0.11
NPHP4-211ENST00000622020 LDLRAP1Q5SW96 308 aa15.76■□□□□ 0.11
NPHP4-211ENST00000622020 PM20D1Q6GTS8 502 aa15.76■□□□□ 0.11
NPHP4-211ENST00000622020 KCTD8Q6ZWB6 473 aa15.76■□□□□ 0.11
NPHP4-211ENST00000622020 LYSMD3Q7Z3D4 306 aa15.76■□□□□ 0.11
NPHP4-211ENST00000622020 ANKFN1Q8N957 763 aa15.76■□□□□ 0.11
NPHP4-211ENST00000622020 GPRC5AQ8NFJ5 357 aa15.76■□□□□ 0.11
NPHP4-211ENST00000622020 OR13J1Q8NGT2 312 aa15.76■□□□□ 0.11
NPHP4-211ENST00000622020 BLOC1S5Q8TDH9 187 aa15.76■□□□□ 0.11
NPHP4-211ENST00000622020 MTG1Q9BT17 334 aaPredicted RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms