RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 IDNKQ5T6J7 187 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 SHKBP1Q8TBC3 707 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 RNF139Q8WU17 664 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 TBC1D17Q9HA65 648 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 RIMKLBQ9ULI2 386 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 PIP5K1CO60331 668 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 TSPAN1O60635 241 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 APOL3O95236 402 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 SPNP16150 400 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 MYL12AP19105 171 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 BDNFP23560 247 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 SSTR2P30874 369 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 E2F2Q14209 437 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 TSTQ16762 297 aaKnown RBP5.04□□□□□ -1.6
VPS13D-214ENST00000620676 FAM160B1Q5W0V3 765 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 GPR153Q6NV75 609 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 FAM20CQ8IXL6 584 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 FAM126BQ8IXS8 530 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 CPB2Q96IY4 423 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 CCDC106Q9BWC9 280 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 IL17RBQ9NRM6 502 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 TRMT6Q9UJA5 497 aaKnown RBP5.04□□□□□ -1.6
VPS13D-214ENST00000620676 NUAK1O60285 661 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 CRHR1P34998 444 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 ZNF81P51508 661 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 TNFAIP8L3Q5GJ75 292 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 ZNF720Q7Z2F6 126 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 DAGLBQ8NCG7 672 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 DLG3Q92796 817 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 ITCHQ96J02 903 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 FAM47E-STBD1D6RA91 191 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 E5RJQ4 531 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 RBAK-RBAKDNI3L0D1 243 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 MYL12BO14950 172 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 IFNA7P01567 189 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 DLDP09622 509 aaKnown RBP5.04□□□□□ -1.6
VPS13D-214ENST00000620676 CDKL4Q5MAI5 379 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 SHQ1Q6PI26 577 aaKnown RBP5.04□□□□□ -1.6
VPS13D-214ENST00000620676 TXNDC11Q6PKC3 985 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 ACTRT2Q8TDY3 377 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 GATA6Q92908 595 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 BIRC7Q96CA5 298 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 SLC22A4Q9H015 551 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 REEP1Q9H902 201 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 FAM118AQ9NWS6 357 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 NCKIPSDQ9NZQ3 722 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 GIMAP2Q9UG22 337 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 NUFIP1Q9UHK0 495 aaKnown RBP5.04□□□□□ -1.6
VPS13D-214ENST00000620676 RPH3AQ9Y2J0 694 aaPredicted RBP5.04□□□□□ -1.6
VPS13D-214ENST00000620676 LOC102724428A0A0B4J2F2 783 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 NTRK1P04629 796 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 SIK1P57059 783 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 UGT3A1Q6NUS8 523 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 ZNF662Q6ZS27 426 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 OTUB1Q96FW1 271 aaPredicted RBP5.04□□□□□ -1.6
VPS13D-214ENST00000620676 BIRC8Q96P09 236 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 NT5MQ9NPB1 228 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 TMCC3Q9ULS5 477 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 MINPP1Q9UNW1 487 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 LYVE1Q9Y5Y7 322 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 PNPLA7Q6ZV29 1317 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 H3BNH8 94 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 PRICKLE3O43900 615 aaPredicted RBP5.04□□□□□ -1.6
VPS13D-214ENST00000620676 BMXP51813 675 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 BATFQ16520 125 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 CASP12Q6UXS9 341 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 ACE2Q9BYF1 805 aaPredicted RBP5.04□□□□□ -1.6
VPS13D-214ENST00000620676 TIMM22Q9Y584 194 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 TMEM221A6NGB7 291 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 POM121CA8CG34 1229 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 ADRB2P07550 413 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 CRKLP46109 303 aaKnown RBP5.04□□□□□ -1.6
VPS13D-214ENST00000620676 CAPZA1P52907 286 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 GALK2Q01415 458 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 SETMARQ53H47 684 aaPredicted RBP5.04□□□□□ -1.6
VPS13D-214ENST00000620676 SLFN12LQ6IEE8 588 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 CGB2Q6NT52 195 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 PLEKHG7Q6ZR37 379 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 OTOP3Q7RTS5 596 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 KRT78Q8N1N4 520 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 RNF149Q8NC42 400 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 GGA3Q9NZ52 723 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 KLK14Q9P0G3 267 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 IRS2Q9Y4H2 1338 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 FABP12A6NFH5 140 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 H3BSH0 61 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 GRIA2P42262 883 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 ANKS6Q68DC2 871 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 PARK7Q99497 189 aaKnown RBP5.04□□□□□ -1.6
VPS13D-214ENST00000620676 DCSTAMPQ9H295 470 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 MAPRE3Q9UPY8 281 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 PADI2Q9Y2J8 665 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 COL6A1P12109 1028 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 SLC15A1P46059 708 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 POLD2P49005 469 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 TDGQ13569 410 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 CFAP77Q6ZQR2 320 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 DET1Q7L5Y6 550 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 TICAM1Q8IUC6 712 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 SHC3Q92529 594 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms