RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 Q6ZVL8 140 aa13.65□□□□□ -0.22
NEK3-210ENST00000620675 MAATS1Q7Z4T9 603 aa13.65□□□□□ -0.22
NEK3-210ENST00000620675 CBARPQ8N350 705 aaPredicted RBP13.65□□□□□ -0.22
NEK3-210ENST00000620675 MPP5Q8N3R9 675 aa13.65□□□□□ -0.22
NEK3-210ENST00000620675 TTC30BQ8N4P2 665 aa13.65□□□□□ -0.22
NEK3-210ENST00000620675 RUNDC3BQ96NL0 473 aa13.65□□□□□ -0.22
NEK3-210ENST00000620675 LYSMD1Q96S90 227 aa13.65□□□□□ -0.22
NEK3-210ENST00000620675 EPC1Q9H2F5 836 aa13.65□□□□□ -0.22
NEK3-210ENST00000620675 BPIFA1Q9NP55 256 aa13.65□□□□□ -0.22
NEK3-210ENST00000620675 EIF2B3Q9NR50 452 aaKnown RBP13.65□□□□□ -0.22
NEK3-210ENST00000620675 TPX2Q9ULW0 747 aaKnown RBP13.65□□□□□ -0.22
NEK3-210ENST00000620675 A0A1W2PQ67 120 aa13.65□□□□□ -0.22
NEK3-210ENST00000620675 FAM187AA6NFU0 413 aa13.65□□□□□ -0.22
NEK3-210ENST00000620675 METTL12A8MUP2 240 aa13.65□□□□□ -0.22
NEK3-210ENST00000620675 CCL22O00626 93 aa13.65□□□□□ -0.22
NEK3-210ENST00000620675 TSPAN6O43657 245 aa13.65□□□□□ -0.22
NEK3-210ENST00000620675 ITPKAP23677 461 aa13.65□□□□□ -0.22
NEK3-210ENST00000620675 NAPEPLDQ6IQ20 393 aa13.65□□□□□ -0.22
NEK3-210ENST00000620675 LAYNQ6UX15 382 aa13.65□□□□□ -0.22
NEK3-210ENST00000620675 PPP1R21Q6ZMI0 780 aa13.65□□□□□ -0.22
NEK3-210ENST00000620675 SYDE1Q6ZW31 735 aaPredicted RBP13.65□□□□□ -0.22
NEK3-210ENST00000620675 CEP68Q76N32 757 aa13.65□□□□□ -0.22
NEK3-210ENST00000620675 DNAAF3Q8N9W5 541 aa13.65□□□□□ -0.22
NEK3-210ENST00000620675 CXorf40AQ8TE69 158 aa13.65□□□□□ -0.22
NEK3-210ENST00000620675 ZNF778Q96MU6 729 aa13.65□□□□□ -0.22
NEK3-210ENST00000620675 CAAP1Q9H8G2 361 aa13.65□□□□□ -0.22
NEK3-210ENST00000620675 TMEM74BQ9NUR3 256 aa13.65□□□□□ -0.22
NEK3-210ENST00000620675 EIF2B4Q9UI10 523 aaKnown RBP13.65□□□□□ -0.22
NEK3-210ENST00000620675 GVINP1Q7Z2Y8 2422 aa13.64□□□□□ -0.23
NEK3-210ENST00000620675 GOLGA6CA6NDK9 693 aa13.64□□□□□ -0.23
NEK3-210ENST00000620675 GOLGA6BA6NDN3 693 aa13.64□□□□□ -0.23
NEK3-210ENST00000620675 ERI2A8K979 691 aaKnown RBP13.64□□□□□ -0.23
NEK3-210ENST00000620675 H0Y8X5 98 aa13.64□□□□□ -0.23
NEK3-210ENST00000620675 LATO43561 262 aa13.64□□□□□ -0.23
NEK3-210ENST00000620675 RECQL5O94762 991 aaPredicted RBP13.64□□□□□ -0.23
NEK3-210ENST00000620675 GOLGA6DP0CG33 693 aa13.64□□□□□ -0.23
NEK3-210ENST00000620675 DHPSP49366 369 aaPredicted RBP13.64□□□□□ -0.23
NEK3-210ENST00000620675 SFSWAPQ12872 951 aaKnown RBP13.64□□□□□ -0.23
NEK3-210ENST00000620675 MSS51Q4VC12 460 aa13.64□□□□□ -0.23
NEK3-210ENST00000620675 CCDC70Q6NSX1 233 aa13.64□□□□□ -0.23
NEK3-210ENST00000620675 TRIM69Q86WT6 500 aa13.64□□□□□ -0.23
NEK3-210ENST00000620675 PPIL6Q8IXY8 311 aa13.64□□□□□ -0.23
NEK3-210ENST00000620675 SCAMP4Q969E2 229 aa13.64□□□□□ -0.23
NEK3-210ENST00000620675 LRRC45Q96CN5 670 aa13.64□□□□□ -0.23
NEK3-210ENST00000620675 COQ10AQ96MF6 247 aa13.64□□□□□ -0.23
NEK3-210ENST00000620675 SERPINB12Q96P63 405 aa13.64□□□□□ -0.23
NEK3-210ENST00000620675 PHOX2BQ99453 314 aa13.64□□□□□ -0.23
NEK3-210ENST00000620675 KLF6Q99612 283 aaPredicted RBP13.64□□□□□ -0.23
NEK3-210ENST00000620675 C1QTNF2Q9BXJ5 285 aa13.64□□□□□ -0.23
NEK3-210ENST00000620675 SLC17A9Q9BYT1 436 aa13.64□□□□□ -0.23
NEK3-210ENST00000620675 KDM4CQ9H3R0 1056 aa13.64□□□□□ -0.23
NEK3-210ENST00000620675 MAGEE1Q9HCI5 957 aa13.64□□□□□ -0.23
NEK3-210ENST00000620675 MBNL1Q9NR56 388 aaKnown RBP13.64□□□□□ -0.23
NEK3-210ENST00000620675 GOLGA6AQ9NYA3 693 aa13.64□□□□□ -0.23
NEK3-210ENST00000620675 BHMG1C9JSJ3 638 aaPredicted RBP13.63□□□□□ -0.23
NEK3-210ENST00000620675 K7ESM1 405 aa13.63□□□□□ -0.23
NEK3-210ENST00000620675 GPR39O43194 453 aa13.63□□□□□ -0.23
NEK3-210ENST00000620675 PSMD3O43242 534 aa13.63□□□□□ -0.23
NEK3-210ENST00000620675 CYP2A6P11509 494 aaPredicted RBP13.63□□□□□ -0.23
NEK3-210ENST00000620675 MGAT1P26572 445 aa13.63□□□□□ -0.23
NEK3-210ENST00000620675 STC1P52823 247 aa13.63□□□□□ -0.23
NEK3-210ENST00000620675 CLDN2P57739 230 aa13.63□□□□□ -0.23
NEK3-210ENST00000620675 RPS21P63220 83 aaKnown RBP13.63□□□□□ -0.23
NEK3-210ENST00000620675 GUCY2DQ02846 1103 aa13.63□□□□□ -0.23
NEK3-210ENST00000620675 CCDC15Q0P6D6 951 aa13.63□□□□□ -0.23
NEK3-210ENST00000620675 ARHGEF7Q14155 803 aa13.63□□□□□ -0.23
NEK3-210ENST00000620675 ACOX1Q15067 660 aa13.63□□□□□ -0.23
NEK3-210ENST00000620675 FNBP1LQ5T0N5 605 aa13.63□□□□□ -0.23
NEK3-210ENST00000620675 HIBCHQ6NVY1 386 aaPredicted RBP13.63□□□□□ -0.23
NEK3-210ENST00000620675 SLC36A4Q6YBV0 504 aa13.63□□□□□ -0.23
NEK3-210ENST00000620675 OR13C4Q8NGS5 318 aa13.63□□□□□ -0.23
NEK3-210ENST00000620675 SNF8Q96H20 258 aa13.63□□□□□ -0.23
NEK3-210ENST00000620675 PPP1R2P1Q96PQ5 205 aa13.63□□□□□ -0.23
NEK3-210ENST00000620675 GPR63Q9BZJ6 419 aa13.63□□□□□ -0.23
NEK3-210ENST00000620675 ZFYVE1Q9HBF4 777 aa13.63□□□□□ -0.23
NEK3-210ENST00000620675 FNDC3AQ9Y2H6 1198 aaKnown RBP13.63□□□□□ -0.23
NEK3-210ENST00000620675 PTPRZ1P23471 2315 aaPredicted RBP13.63□□□□□ -0.23
NEK3-210ENST00000620675 LDB2O43679 373 aa13.63□□□□□ -0.23
NEK3-210ENST00000620675 TM7SF2O76062 418 aa13.63□□□□□ -0.23
NEK3-210ENST00000620675 RHOXF2BP0C7M4 288 aa13.63□□□□□ -0.23
NEK3-210ENST00000620675 CA5AP35218 305 aa13.63□□□□□ -0.23
NEK3-210ENST00000620675 TNNT3P45378 269 aaPredicted RBP13.63□□□□□ -0.23
NEK3-210ENST00000620675 SUOXP51687 545 aa13.63□□□□□ -0.23
NEK3-210ENST00000620675 CDH17Q12864 832 aa13.63□□□□□ -0.23
NEK3-210ENST00000620675 CCDC6Q16204 474 aa13.63□□□□□ -0.23
NEK3-210ENST00000620675 WSCD2Q2TBF2 565 aa13.63□□□□□ -0.23
NEK3-210ENST00000620675 HP1BP3Q5SSJ5 553 aaPredicted RBP13.63□□□□□ -0.23
NEK3-210ENST00000620675 KIAA1161Q6NSJ0 714 aa13.63□□□□□ -0.23
NEK3-210ENST00000620675 ZDHHC24Q6UX98 284 aa13.63□□□□□ -0.23
NEK3-210ENST00000620675 LPCAT2Q7L5N7 544 aa13.63□□□□□ -0.23
NEK3-210ENST00000620675 GLT6D1Q7Z4J2 308 aa13.63□□□□□ -0.23
NEK3-210ENST00000620675 TMC3Q7Z5M5 1100 aa13.63□□□□□ -0.23
NEK3-210ENST00000620675 TECPR1Q7Z6L1 1165 aa13.63□□□□□ -0.23
NEK3-210ENST00000620675 PLA2G15Q8NCC3 412 aa13.63□□□□□ -0.23
NEK3-210ENST00000620675 C1orf216Q8TAB5 229 aa13.63□□□□□ -0.23
NEK3-210ENST00000620675 ATOH1Q92858 354 aaPredicted RBP13.63□□□□□ -0.23
NEK3-210ENST00000620675 ZC3H10Q96K80 434 aaKnown RBP13.63□□□□□ -0.23
NEK3-210ENST00000620675 AGAP2Q99490 1192 aa13.63□□□□□ -0.23
NEK3-210ENST00000620675 RHOXF2Q9BQY4 288 aa13.63□□□□□ -0.23
NEK3-210ENST00000620675 MIR1-1HGQ9H1L0 117 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms