RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 MCCC1Q96RQ3 725 aaPredicted RBP17.18■□□□□ 0.34
HMGN3-203ENST00000620514 RBM15Q96T37 977 aaKnown RBP eCLIP17.18■□□□□ 0.34
HMGN3-203ENST00000620514 WDR26Q9H7D7 661 aa17.18■□□□□ 0.34
HMGN3-203ENST00000620514 LCMT1Q9UIC8 334 aa17.18■□□□□ 0.34
HMGN3-203ENST00000620514 GPR34Q9UPC5 381 aa17.18■□□□□ 0.34
HMGN3-203ENST00000620514 TTLL3Q9Y4R7 772 aa17.18■□□□□ 0.34
HMGN3-203ENST00000620514 DGKBQ9Y6T7 804 aa17.18■□□□□ 0.34
HMGN3-203ENST00000620514 FZD6O60353 706 aa17.17■□□□□ 0.34
HMGN3-203ENST00000620514 USP12O75317 370 aa17.17■□□□□ 0.34
HMGN3-203ENST00000620514 HOXC4P09017 264 aaPredicted RBP17.17■□□□□ 0.34
HMGN3-203ENST00000620514 CCNCP24863 283 aa17.17■□□□□ 0.34
HMGN3-203ENST00000620514 EIF2S3P41091 472 aaKnown RBP17.17■□□□□ 0.34
HMGN3-203ENST00000620514 NIPAL4Q0D2K0 466 aa17.17■□□□□ 0.34
HMGN3-203ENST00000620514 ISXQ2M1V0 245 aa17.17■□□□□ 0.34
HMGN3-203ENST00000620514 TIGD7Q6NT04 549 aaPredicted RBP17.17■□□□□ 0.34
HMGN3-203ENST00000620514 LVRNQ6Q4G3 990 aa17.17■□□□□ 0.34
HMGN3-203ENST00000620514 Q6ZVL8 140 aa17.17■□□□□ 0.34
HMGN3-203ENST00000620514 PDZD3Q86UT5 571 aa17.17■□□□□ 0.34
HMGN3-203ENST00000620514 SFTPA2Q8IWL1 248 aa17.17■□□□□ 0.34
HMGN3-203ENST00000620514 ARL10Q8N8L6 244 aa17.17■□□□□ 0.34
HMGN3-203ENST00000620514 SCG3Q8WXD2 468 aaKnown RBP17.17■□□□□ 0.34
HMGN3-203ENST00000620514 NAT6Q93015 286 aa17.17■□□□□ 0.34
HMGN3-203ENST00000620514 DTD2Q96FN9 168 aa17.17■□□□□ 0.34
HMGN3-203ENST00000620514 RNF157Q96PX1 679 aa17.17■□□□□ 0.34
HMGN3-203ENST00000620514 CCDC3Q9BQI4 270 aa17.17■□□□□ 0.34
HMGN3-203ENST00000620514 POLR1EQ9GZS1 481 aaKnown RBP17.17■□□□□ 0.34
HMGN3-203ENST00000620514 CYP4F12Q9HCS2 524 aa17.17■□□□□ 0.34
HMGN3-203ENST00000620514 DTLQ9NZJ0 730 aa17.17■□□□□ 0.34
HMGN3-203ENST00000620514 RABGEF1Q9UJ41 708 aa17.17■□□□□ 0.34
HMGN3-203ENST00000620514 MOSPD1Q9UJG1 213 aa17.17■□□□□ 0.34
HMGN3-203ENST00000620514 PPIL1Q9Y3C6 166 aa17.17■□□□□ 0.34
HMGN3-203ENST00000620514 A0A1W2PNU3 283 aaPredicted RBP17.16■□□□□ 0.34
HMGN3-203ENST00000620514 LRRD1A4D1F6 860 aa17.16■□□□□ 0.34
HMGN3-203ENST00000620514 HLA-DQB2P05538 268 aa17.16■□□□□ 0.34
HMGN3-203ENST00000620514 CCNB1P14635 433 aa17.16■□□□□ 0.34
HMGN3-203ENST00000620514 HOXB3P14651 431 aaPredicted RBP17.16■□□□□ 0.34
HMGN3-203ENST00000620514 ITPKBP27987 946 aa17.16■□□□□ 0.34
HMGN3-203ENST00000620514 TBX2Q13207 712 aaPredicted RBP17.16■□□□□ 0.34
HMGN3-203ENST00000620514 ARHGEF7Q14155 803 aa17.16■□□□□ 0.34
HMGN3-203ENST00000620514 ALG1LQ6GMV1 187 aa17.16■□□□□ 0.34
HMGN3-203ENST00000620514 USP45Q70EL2 814 aa17.16■□□□□ 0.34
HMGN3-203ENST00000620514 HEATR4Q86WZ0 1026 aa17.16■□□□□ 0.34
HMGN3-203ENST00000620514 CCL4L1Q8NHW4 92 aa17.16■□□□□ 0.34
HMGN3-203ENST00000620514 ARRDC2Q8TBH0 407 aa17.16■□□□□ 0.34
HMGN3-203ENST00000620514 PTCD2Q8WV60 388 aaKnown RBP17.16■□□□□ 0.34
HMGN3-203ENST00000620514 TMEM168Q9H0V1 697 aa17.16■□□□□ 0.34
HMGN3-203ENST00000620514 SUDS3Q9H7L9 328 aaPredicted RBP17.16■□□□□ 0.34
HMGN3-203ENST00000620514 SYNDIG1Q9H7V2 258 aa17.16■□□□□ 0.34
HMGN3-203ENST00000620514 CHKBQ9Y259 395 aa17.16■□□□□ 0.34
HMGN3-203ENST00000620514 HYOU1Q9Y4L1 999 aa17.16■□□□□ 0.34
HMGN3-203ENST00000620514 ITPR1Q14643 2758 aa17.16■□□□□ 0.34
HMGN3-203ENST00000620514 GOLGA6CA6NDK9 693 aa17.15■□□□□ 0.34
HMGN3-203ENST00000620514 GOLGA6BA6NDN3 693 aa17.15■□□□□ 0.34
HMGN3-203ENST00000620514 C3orf70A6NLC5 250 aaPredicted RBP17.15■□□□□ 0.34
HMGN3-203ENST00000620514 AKR1B15C9JRZ8 316 aaPredicted RBP17.15■□□□□ 0.34
HMGN3-203ENST00000620514 TNFRSF10CO14798 259 aa17.15■□□□□ 0.34
HMGN3-203ENST00000620514 MTA2O94776 668 aa17.15■□□□□ 0.34
HMGN3-203ENST00000620514 FUCA1P04066 466 aa17.15■□□□□ 0.34
HMGN3-203ENST00000620514 GOLGA6DP0CG33 693 aa17.15■□□□□ 0.34
HMGN3-203ENST00000620514 MYCLP1P12525 358 aaPredicted RBP17.15■□□□□ 0.34
HMGN3-203ENST00000620514 MX2P20592 715 aa17.15■□□□□ 0.34
HMGN3-203ENST00000620514 KELP23276 732 aa17.15■□□□□ 0.34
HMGN3-203ENST00000620514 NFKBIAP25963 317 aa17.15■□□□□ 0.34
HMGN3-203ENST00000620514 GABREP78334 506 aa17.15■□□□□ 0.34
HMGN3-203ENST00000620514 TBC1D25Q3MII6 688 aa17.15■□□□□ 0.34
HMGN3-203ENST00000620514 LRRC66Q68CR7 880 aa17.15■□□□□ 0.34
HMGN3-203ENST00000620514 RBM44Q6ZP01 1051 aaKnown RBP17.15■□□□□ 0.34
HMGN3-203ENST00000620514 TECPR1Q7Z6L1 1165 aa17.15■□□□□ 0.34
HMGN3-203ENST00000620514 TAF8Q7Z7C8 310 aa17.15■□□□□ 0.34
HMGN3-203ENST00000620514 CCDC13Q8IYE1 715 aa17.15■□□□□ 0.34
HMGN3-203ENST00000620514 SDR16C5Q8N3Y7 309 aa17.15■□□□□ 0.34
HMGN3-203ENST00000620514 PLD5Q8N7P1 536 aa17.15■□□□□ 0.34
HMGN3-203ENST00000620514 CCNYQ8ND76 341 aa17.15■□□□□ 0.34
HMGN3-203ENST00000620514 TPCN2Q8NHX9 752 aa17.15■□□□□ 0.34
HMGN3-203ENST00000620514 SNIP1Q8TAD8 396 aaKnown RBP17.15■□□□□ 0.34
HMGN3-203ENST00000620514 FGF11Q92914 225 aa17.15■□□□□ 0.34
HMGN3-203ENST00000620514 FATE1Q969F0 183 aa17.15■□□□□ 0.34
HMGN3-203ENST00000620514 CCDC74AQ96AQ1 378 aa17.15■□□□□ 0.34
HMGN3-203ENST00000620514 HDAC11Q96DB2 347 aa17.15■□□□□ 0.34
HMGN3-203ENST00000620514 ATXN7L3BQ96GX2 97 aa17.15■□□□□ 0.34
HMGN3-203ENST00000620514 LGMNQ99538 433 aa17.15■□□□□ 0.34
HMGN3-203ENST00000620514 TDRD1Q9BXT4 1180 aaKnown RBP17.15■□□□□ 0.34
HMGN3-203ENST00000620514 TEX101Q9BY14 249 aa17.15■□□□□ 0.34
HMGN3-203ENST00000620514 PHPT1Q9NRX4 125 aaPredicted RBP17.15■□□□□ 0.34
HMGN3-203ENST00000620514 GOLGA6AQ9NYA3 693 aa17.15■□□□□ 0.34
HMGN3-203ENST00000620514 CD84Q9UIB8 345 aa17.15■□□□□ 0.34
HMGN3-203ENST00000620514 ENTPD2Q9Y5L3 495 aa17.15■□□□□ 0.34
HMGN3-203ENST00000620514 A0A0J9YYE9 177 aa17.14■□□□□ 0.33
HMGN3-203ENST00000620514 PRSS38A1L453 326 aa17.14■□□□□ 0.33
HMGN3-203ENST00000620514 PMS2P1A4D2B8 440 aa17.14■□□□□ 0.33
HMGN3-203ENST00000620514 KCNK1O00180 336 aa17.14■□□□□ 0.33
HMGN3-203ENST00000620514 PSMD11O00231 422 aa17.14■□□□□ 0.33
HMGN3-203ENST00000620514 PRLP01236 227 aa17.14■□□□□ 0.33
HMGN3-203ENST00000620514 JCHAINP01591 159 aa17.14■□□□□ 0.33
HMGN3-203ENST00000620514 TRBC1P01850 177 aa17.14■□□□□ 0.33
HMGN3-203ENST00000620514 KRT1P04264 644 aa17.14■□□□□ 0.33
HMGN3-203ENST00000620514 CEACAM5P06731 702 aa17.14■□□□□ 0.33
HMGN3-203ENST00000620514 ACTN2P35609 894 aa17.14■□□□□ 0.33
HMGN3-203ENST00000620514 ARHGAP25P42331 645 aa17.14■□□□□ 0.33
HMGN3-203ENST00000620514 PDX1P52945 283 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms