RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 CFHR1Q03591 330 aa11.93□□□□□ -0.5
UPF3B-204ENST00000619445 SLC10A7Q0GE19 358 aa11.93□□□□□ -0.5
UPF3B-204ENST00000619445 HADHQ16836 314 aaKnown RBP11.93□□□□□ -0.5
UPF3B-204ENST00000619445 C14orf28Q4W4Y0 310 aa11.93□□□□□ -0.5
UPF3B-204ENST00000619445 TDRD12Q587J7 1177 aaKnown RBP11.93□□□□□ -0.5
UPF3B-204ENST00000619445 ARHGAP40Q5TG30 622 aa11.93□□□□□ -0.5
UPF3B-204ENST00000619445 INO80CQ6PI98 192 aaPredicted RBP11.93□□□□□ -0.5
UPF3B-204ENST00000619445 FOXR1Q6PIV2 292 aa11.93□□□□□ -0.5
UPF3B-204ENST00000619445 CCDC81Q6ZN84 652 aa11.93□□□□□ -0.5
UPF3B-204ENST00000619445 OR1E3Q8WZA6 343 aa11.93□□□□□ -0.5
UPF3B-204ENST00000619445 SCRN2Q96FV2 425 aa11.93□□□□□ -0.5
UPF3B-204ENST00000619445 COQ10AQ96MF6 247 aa11.93□□□□□ -0.5
UPF3B-204ENST00000619445 CSPG4P5Q96PW8 444 aa11.93□□□□□ -0.5
UPF3B-204ENST00000619445 CMKLR1Q99788 373 aa11.93□□□□□ -0.5
UPF3B-204ENST00000619445 DPEP2Q9H4A9 486 aa11.93□□□□□ -0.5
UPF3B-204ENST00000619445 EPB41L5Q9HCM4 733 aa11.93□□□□□ -0.5
UPF3B-204ENST00000619445 CYP4F12Q9HCS2 524 aa11.93□□□□□ -0.5
UPF3B-204ENST00000619445 FGF22Q9HCT0 170 aa11.93□□□□□ -0.5
UPF3B-204ENST00000619445 MYO1AQ9UBC5 1043 aa11.93□□□□□ -0.5
UPF3B-204ENST00000619445 B4GALT6Q9UBX8 382 aa11.93□□□□□ -0.5
UPF3B-204ENST00000619445 AMACRQ9UHK6 382 aa11.93□□□□□ -0.5
UPF3B-204ENST00000619445 TMEM202A6NGA9 273 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 MYO1FO00160 1098 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 NVLO15381 856 aaKnown RBP11.92□□□□□ -0.5
UPF3B-204ENST00000619445 MAFKO60675 156 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 HEXIM1O94992 359 aaKnown RBP11.92□□□□□ -0.5
UPF3B-204ENST00000619445 PRKCGP05129 697 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 CCNB1P14635 433 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 CR2P20023 1033 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 CD82P27701 267 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 UGT1A5P35504 534 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 MMP13P45452 471 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 PDX1P52945 283 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 CCL7P80098 99 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 DPTQ07507 201 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 NR1I3Q14994 352 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 ARMC12Q5T9G4 340 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 TMEM164Q5U3C3 297 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 SPECC1LQ69YQ0 1117 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 TIGD7Q6NT04 549 aaPredicted RBP11.92□□□□□ -0.5
UPF3B-204ENST00000619445 ZNF605Q86T29 641 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 PLA2G15Q8NCC3 412 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 GPBAR1Q8TDU6 330 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 PDCD6IPQ8WUM4 868 aaKnown RBP11.92□□□□□ -0.5
UPF3B-204ENST00000619445 HSPH1Q92598 858 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 FATE1Q969F0 183 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 DTD2Q96FN9 168 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 MCCC1Q96RQ3 725 aaPredicted RBP11.92□□□□□ -0.5
UPF3B-204ENST00000619445 CCNL2Q96S94 520 aaPredicted RBP11.92□□□□□ -0.5
UPF3B-204ENST00000619445 DPYSL5Q9BPU6 564 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.92□□□□□ -0.5
UPF3B-204ENST00000619445 TEX101Q9BY14 249 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 TRIM7Q9C029 511 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 SEPT10Q9P0V9 454 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 TMEM63CQ9P1W3 806 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 LRIT1Q9P2V4 623 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 ATXN7L1Q9ULK2 861 aaPredicted RBP11.92□□□□□ -0.5
UPF3B-204ENST00000619445 PPIL1Q9Y3C6 166 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 A0A1W2PNU3 283 aaPredicted RBP11.92□□□□□ -0.5
UPF3B-204ENST00000619445 A0A1W2PQM1 296 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 NOBOXO60393 691 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 PGLSO95336 258 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 CPNE6O95741 557 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 SERPING1P05155 500 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 RARAP10276 462 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 ZNF30P17039 623 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 AMPD1P23109 780 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 GPR3P46089 330 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 ZBED6P86452 979 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 BIRC2Q13490 618 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 HLTFQ14527 1009 aaKnown RBP eCLIP11.92□□□□□ -0.5
UPF3B-204ENST00000619445 KRT81Q14533 505 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 CNGA3Q16281 694 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 SMTNL2Q2TAL5 461 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 CCDC122Q5T0U0 273 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 ARHGAP36Q6ZRI8 547 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 SPRED1Q7Z699 444 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 PIM3Q86V86 326 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 NLRP8Q86W28 1048 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 MAP7D3Q8IWC1 876 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 POLR1EQ9GZS1 481 aaKnown RBP11.92□□□□□ -0.5
UPF3B-204ENST00000619445 TMEM168Q9H0V1 697 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 CDH19Q9H159 772 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 CARS2Q9HA77 564 aaKnown RBP11.92□□□□□ -0.5
UPF3B-204ENST00000619445 NOD2Q9HC29 1040 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 CPNE5Q9HCH3 593 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 MOSPD1Q9UJG1 213 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 ANAPC7Q9UJX3 599 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 PCDHGC4Q9Y5F7 938 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 ATMQ13315 3056 aa11.92□□□□□ -0.5
UPF3B-204ENST00000619445 SCN8AQ9UQD0 1980 aa11.91□□□□□ -0.5
UPF3B-204ENST00000619445 RHPN2P1A8MT19 583 aa11.91□□□□□ -0.5
UPF3B-204ENST00000619445 B4DGG1 531 aa11.91□□□□□ -0.5
UPF3B-204ENST00000619445 HGSO14964 777 aaPredicted RBP11.91□□□□□ -0.5
UPF3B-204ENST00000619445 PEX11BO96011 259 aa11.91□□□□□ -0.5
UPF3B-204ENST00000619445 TPM3P06753 285 aa11.91□□□□□ -0.5
UPF3B-204ENST00000619445 IVLP07476 585 aa11.91□□□□□ -0.5
UPF3B-204ENST00000619445 MX2P20592 715 aa11.91□□□□□ -0.5
UPF3B-204ENST00000619445 IL1R2P27930 398 aa11.91□□□□□ -0.5
UPF3B-204ENST00000619445 SLC5A2P31639 672 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms