RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 ELMO2Q96JJ3 720 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 RTP3Q9BQQ7 232 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 COQ10BQ9H8M1 238 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 SPAG4Q9NPE6 437 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 ACSS2Q9NR19 701 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 UBAP1Q9NZ09 502 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 HACD3Q9P035 362 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 CCDC167Q9P0B6 97 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 CROTQ9UKG9 612 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 TBX21Q9UL17 535 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 SLC8A2Q9UPR5 921 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 HMX2A2RU54 273 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 GOLGA8TH3BQL2 631 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 STX16-NPEPL1H3BU86 382 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 MRASO14807 208 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 GMNNO75496 209 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 FBXO21O94952 628 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 ESRRBO95718 433 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 ALOX15P16050 662 aaPredicted RBP7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 STMN1P16949 149 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 CDK9P50750 372 aaKnown RBP7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 MYBPC1Q00872 1141 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 ELAVL2Q12926 359 aaKnown RBP7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 CBX3Q13185 183 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 DLG2Q15700 870 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 DPYSL2Q16555 572 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 ARL13BQ3SXY8 428 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 TMEM198Q66K66 360 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 IL31Q6EBC2 164 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 NAPEPLDQ6IQ20 393 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 TRNP1Q6NT89 227 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 HERC6Q8IVU3 1022 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 TMEM199Q8N511 208 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 TERB1Q8NA31 727 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 RNF139Q8WU17 664 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 HSPBAP1Q96EW2 488 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 SEPT5Q99719 369 aaPredicted RBP7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 ZBED2Q9BTP6 218 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 CENPOQ9BU64 300 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 OXCT2Q9BYC2 517 aaPredicted RBP7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 OSBPL6Q9BZF3 934 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 PRDM12Q9H4Q4 367 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 VPS45Q9NRW7 570 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 YJEFN3A6XGL0 299 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 TK2O00142 265 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 PSMD12O00232 456 aaPredicted RBP7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 MATN2O00339 956 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 SMAD7O15105 426 aaKnown RBP7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 ALDH1A2O94788 518 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 CDH2P19022 906 aaPredicted RBP7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 PSMA4P25789 261 aaKnown RBP7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 EEF1DP29692 281 aaKnown RBP7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 MATKP42679 507 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 C21orf59P57076 290 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 TRIM25Q14258 630 aaKnown RBP7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 DDR2Q16832 855 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 IL23RQ5VWK5 629 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 POTEHQ6S545 545 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 ZYG11AQ6WRX3 759 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 RNF111Q6ZNA4 994 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 HFE2Q6ZVN8 426 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 GPRIN1Q7Z2K8 1008 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 MAVSQ7Z434 540 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 PSTKQ8IV42 348 aaKnown RBP7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 NETO2Q8NC67 525 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 SCAMP5Q8TAC9 235 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 LRTOMTQ8WZ04 291 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 TMEM169Q96HH4 297 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 PLEKHG4BQ96PX9 1271 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 KCTD15Q96SI1 283 aaPredicted RBP7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 YME1L1Q96TA2 773 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 ING2Q9H160 280 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 CNGB3Q9NQW8 809 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 ARHGEF38Q9NXL2 777 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 TLR6Q9Y2C9 796 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 ZNF839A8K0R7 811 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 SYN3O14994 580 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 ANGPT2O15123 496 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 MFSD11O43934 449 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 OCM2P0CE71 109 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 OCMP0CE72 109 aaPredicted RBP7□□□□□ -1.29
SRGAP3-213ENST00000618999 TTKP33981 857 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 NOS2P35228 1153 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 INHBCP55103 352 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 IRF9Q00978 393 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 CEACAM7Q14002 265 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 ZNF423Q2M1K9 1284 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 TUSC1Q2TAM9 212 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 PIGGQ5H8A4 983 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 SYPL2Q5VXT5 272 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 BTBD8Q5XKL5 378 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 BORAQ6PGQ7 559 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 GK5Q6ZS86 529 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 CAMK1DQ8IU85 385 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 ZMIZ2Q8NF64 920 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 KCTD4Q8WVF5 259 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 GAB3Q8WWW8 586 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 KCTD13Q8WZ19 329 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 ASB9Q96DX5 294 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 SLC25A23Q9BV35 468 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms