RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-223	ENST00000618944	FES	P07332	822 aa		11.21	□□□□□ -0.61
TP53-223	ENST00000618944	SNRPB2	P08579	225 aa	Known RBP	11.21	□□□□□ -0.61
TP53-223	ENST00000618944	SLC10A3	P09131	477 aa		11.21	□□□□□ -0.61
TP53-223	ENST00000618944	HSPA1A	P0DMV8	641 aa	Known RBP	11.21	□□□□□ -0.61
TP53-223	ENST00000618944	HSPA1B	P0DMV9	641 aa	Known RBP	11.21	□□□□□ -0.61
TP53-223	ENST00000618944	CD1D	P15813	335 aa		11.21	□□□□□ -0.61
TP53-223	ENST00000618944	CHN2	P52757	468 aa		11.21	□□□□□ -0.61
TP53-223	ENST00000618944	FOXA1	P55317	472 aa		11.21	□□□□□ -0.61
TP53-223	ENST00000618944	IRX1	P78414	480 aa	Predicted RBP	11.21	□□□□□ -0.61
TP53-223	ENST00000618944	SQLE	Q14534	574 aa		11.21	□□□□□ -0.61
TP53-223	ENST00000618944	RFTN1	Q14699	578 aa	Predicted RBP	11.21	□□□□□ -0.61
TP53-223	ENST00000618944	RARS2	Q5T160	578 aa	Known RBP	11.21	□□□□□ -0.61
TP53-223	ENST00000618944	C6orf52	Q5T4I8	152 aa		11.21	□□□□□ -0.61
TP53-223	ENST00000618944	FAM45BP	Q6NSW5	357 aa		11.21	□□□□□ -0.61
TP53-223	ENST00000618944	SLC30A9	Q6PML9	568 aa		11.21	□□□□□ -0.61
TP53-223	ENST00000618944	UGT2A3	Q6UWM9	527 aa		11.21	□□□□□ -0.61
TP53-223	ENST00000618944	FAM45A	Q8TCE6	357 aa		11.21	□□□□□ -0.61
TP53-223	ENST00000618944	TADA1	Q96BN2	335 aa		11.21	□□□□□ -0.61
TP53-223	ENST00000618944	TRAPPC9	Q96Q05	1148 aa		11.21	□□□□□ -0.61
TP53-223	ENST00000618944	MID1IP1	Q9NPA3	183 aa		11.21	□□□□□ -0.61
TP53-223	ENST00000618944	SPATS2L	Q9NUQ6	558 aa	Known RBP	11.21	□□□□□ -0.61
TP53-223	ENST00000618944	UBAP1	Q9NZ09	502 aa		11.21	□□□□□ -0.61
TP53-223	ENST00000618944	BCAP29	Q9UHQ4	241 aa		11.21	□□□□□ -0.61
TP53-223	ENST00000618944	FAM50B	Q9Y247	325 aa		11.21	□□□□□ -0.61
TP53-223	ENST00000618944	PRORSD1P	A6NEY8	169 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944		H3BMM5	538 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	CA12	O43570	354 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	TLR5	O60602	858 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	CSPG5	O95196	566 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	PGM3	O95394	542 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	CRTAM	O95727	393 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	TACR2	P21452	398 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	FMO4	P31512	558 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	SCNN1B	P51168	640 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	TRIM25	Q14258	630 aa	Known RBP	11.2	□□□□□ -0.62
TP53-223	ENST00000618944	KIF19	Q2TAC6	998 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	PARP15	Q460N3	678 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	LIN52	Q52LA3	116 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	ZFP1	Q6P2D0	407 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	TAS1R1	Q7RTX1	841 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	PCSK9	Q8NBP7	692 aa	Known RBP	11.2	□□□□□ -0.62
TP53-223	ENST00000618944	OR4L1	Q8NH43	312 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	TRPC4AP	Q8TEL6	797 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	C19orf60	Q96EN9	201 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	LRCH3	Q96II8	777 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	SLC45A3	Q96JT2	553 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	NSMCE3	Q96MG7	304 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	KCNA7	Q96RP8	456 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	AKTIP	Q9H8T0	292 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	CATSPERZ	Q9NTU4	200 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	POLR3B	Q9NW08	1133 aa	Predicted RBP	11.2	□□□□□ -0.62
TP53-223	ENST00000618944	TDRD15	B5MCY1	1934 aa	Known RBP	11.2	□□□□□ -0.62
TP53-223	ENST00000618944		A0A0U1RQS6	177 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	MRAS	O14807	208 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	INPPL1	O15357	1258 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	PRAMEF11	O60813	436 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	SNUPN	O95149	360 aa	Known RBP	11.2	□□□□□ -0.62
TP53-223	ENST00000618944	WISP3	O95389	354 aa	Predicted RBP	11.2	□□□□□ -0.62
TP53-223	ENST00000618944	ETS2	P15036	469 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	HERVK_113	P63132	956 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	PTPRR	Q15256	657 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	MRNIP	Q6NTE8	343 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	TRAF7	Q6Q0C0	670 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	LARP4	Q71RC2	724 aa	Known RBP eCLIP	11.2	□□□□□ -0.62	3e-11	■□□□□ 10.4
TP53-223	ENST00000618944	DDIAS	Q8IXT1	998 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	ABI1	Q8IZP0	508 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	BRSK1	Q8TDC3	778 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	STON2	Q8WXE9	905 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	LPGAT1	Q92604	370 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	FATE1	Q969F0	183 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	RMDN1	Q96DB5	314 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	BTBD9	Q96Q07	612 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	ERVK-6	Q9BXR3	956 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	FAM192A	Q9GZU8	254 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	RNF186	Q9NXI6	227 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	UTP6	Q9NYH9	597 aa	Known RBP	11.2	□□□□□ -0.62
TP53-223	ENST00000618944	IL37	Q9NZH6	218 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	SPO11	Q9Y5K1	396 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	DNAJC15	Q9Y5T4	150 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	NLRC5	Q86WI3	1866 aa		11.2	□□□□□ -0.62
TP53-223	ENST00000618944	C15orf38-AP3S2	A0A0A6YYH1	394 aa		11.19	□□□□□ -0.62
TP53-223	ENST00000618944		A0A1B0GTL3	188 aa		11.19	□□□□□ -0.62
TP53-223	ENST00000618944	MYOCOS	A0A1B0GUC4	107 aa		11.19	□□□□□ -0.62
TP53-223	ENST00000618944	PRSS51	A0A1B0GVH4	220 aa		11.19	□□□□□ -0.62
TP53-223	ENST00000618944	MTMR11	A4FU01	709 aa		11.19	□□□□□ -0.62
TP53-223	ENST00000618944	NCF1B	A6NI72	391 aa	Predicted RBP	11.19	□□□□□ -0.62
TP53-223	ENST00000618944	NCF1C	A8MVU1	366 aa	Predicted RBP	11.19	□□□□□ -0.62
TP53-223	ENST00000618944	FAM155A	B1AL88	458 aa	Predicted RBP	11.19	□□□□□ -0.62
TP53-223	ENST00000618944	AHCYL1	O43865	530 aa		11.19	□□□□□ -0.62
TP53-223	ENST00000618944	NRP2	O60462	931 aa		11.19	□□□□□ -0.62
TP53-223	ENST00000618944	RPP40	O75818	363 aa	Known RBP	11.19	□□□□□ -0.62
TP53-223	ENST00000618944	CDK14	O94921	469 aa		11.19	□□□□□ -0.62
TP53-223	ENST00000618944	VNN2	O95498	520 aa		11.19	□□□□□ -0.62
TP53-223	ENST00000618944	SERPINF2	P08697	491 aa		11.19	□□□□□ -0.62
TP53-223	ENST00000618944	ALDOC	P09972	364 aa	Known RBP	11.19	□□□□□ -0.62
TP53-223	ENST00000618944	LINC00032	P0C843	101 aa		11.19	□□□□□ -0.62
TP53-223	ENST00000618944	GFAP	P14136	432 aa		11.19	□□□□□ -0.62
TP53-223	ENST00000618944	NCF1	P14598	390 aa	Predicted RBP	11.19	□□□□□ -0.62
TP53-223	ENST00000618944	FDXR	P22570	491 aa		11.19	□□□□□ -0.62
TP53-223	ENST00000618944	FGFR3	P22607	806 aa		11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms