RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 WDR87Q6ZQQ6 2873 aa12.12□□□□□ -0.47
SRRT-216ENST00000618262 AQP9O43315 295 aa12.12□□□□□ -0.47
SRRT-216ENST00000618262 HOXC12P31275 282 aa12.12□□□□□ -0.47
SRRT-216ENST00000618262 DNAJA1P31689 397 aaKnown RBP12.12□□□□□ -0.47
SRRT-216ENST00000618262 HSPA13P48723 471 aa12.12□□□□□ -0.47
SRRT-216ENST00000618262 SMAD3P84022 425 aaKnown RBP12.12□□□□□ -0.47
SRRT-216ENST00000618262 PPA1Q15181 289 aa12.12□□□□□ -0.47
SRRT-216ENST00000618262 LILRA6Q6PI73 481 aa12.12□□□□□ -0.47
SRRT-216ENST00000618262 SATL1Q86VE3 508 aa12.12□□□□□ -0.47
SRRT-216ENST00000618262 CDH26Q8IXH8 852 aa12.12□□□□□ -0.47
SRRT-216ENST00000618262 PYROXD2Q8N2H3 581 aa12.12□□□□□ -0.47
SRRT-216ENST00000618262 DEFB123Q8N688 67 aa12.12□□□□□ -0.47
SRRT-216ENST00000618262 ARL14EPQ8N8R7 260 aaPredicted RBP12.12□□□□□ -0.47
SRRT-216ENST00000618262 TPCN2Q8NHX9 752 aa12.12□□□□□ -0.47
SRRT-216ENST00000618262 UTP15Q8TED0 518 aaKnown RBP12.12□□□□□ -0.47
SRRT-216ENST00000618262 FAM172AQ8WUF8 416 aa12.12□□□□□ -0.47
SRRT-216ENST00000618262 PBKQ96KB5 322 aa12.12□□□□□ -0.47
SRRT-216ENST00000618262 CCDC138Q96M89 665 aa12.12□□□□□ -0.47
SRRT-216ENST00000618262 ARMC7Q9H6L4 198 aa12.12□□□□□ -0.47
SRRT-216ENST00000618262 TBC1D23Q9NUY8 699 aa12.12□□□□□ -0.47
SRRT-216ENST00000618262 INTS7Q9NVH2 962 aaKnown RBP12.12□□□□□ -0.47
SRRT-216ENST00000618262 FAM221BA6H8Z2 402 aa12.12□□□□□ -0.47
SRRT-216ENST00000618262 PLOD2O00469 737 aa12.12□□□□□ -0.47
SRRT-216ENST00000618262 GLP2RO95838 553 aa12.12□□□□□ -0.47
SRRT-216ENST00000618262 LTFP02788 710 aa12.12□□□□□ -0.47
SRRT-216ENST00000618262 HMGA1P17096 107 aaKnown RBP12.12□□□□□ -0.47
SRRT-216ENST00000618262 ACSL1P33121 698 aa12.12□□□□□ -0.47
SRRT-216ENST00000618262 CDH5P33151 784 aaPredicted RBP12.12□□□□□ -0.47
SRRT-216ENST00000618262 TAS2R40P59535 323 aa12.12□□□□□ -0.47
SRRT-216ENST00000618262 VEPH1Q14D04 833 aa12.12□□□□□ -0.47
SRRT-216ENST00000618262 VSTM1Q6UX27 236 aa12.12□□□□□ -0.47
SRRT-216ENST00000618262 GAREM2Q75VX8 874 aa12.12□□□□□ -0.47
SRRT-216ENST00000618262 GPR141Q7Z602 305 aa12.12□□□□□ -0.47
SRRT-216ENST00000618262 FAR2Q96K12 515 aa12.12□□□□□ -0.47
SRRT-216ENST00000618262 RXFP1Q9HBX9 757 aa12.12□□□□□ -0.47
SRRT-216ENST00000618262 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.12□□□□□ -0.477e-8■■□□□ 12.9
SRRT-216ENST00000618262 TBC1D14Q9P2M4 693 aa12.12□□□□□ -0.47
SRRT-216ENST00000618262 GMEB2Q9UKD1 530 aa12.12□□□□□ -0.47
SRRT-216ENST00000618262 SAR1BQ9Y6B6 198 aa12.12□□□□□ -0.47
SRRT-216ENST00000618262 C15orf38-AP3S2A0A0A6YYH1 394 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 STX16-NPEPL1H3BU86 382 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 HOXC11O43248 304 aaPredicted RBP12.11□□□□□ -0.47
SRRT-216ENST00000618262 OPHN1O60890 802 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 NIPSNAP2O75323 286 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 BMP10O95393 424 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 SOX6P35712 828 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 SLC9A3P48764 834 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 HNRNPFP52597 415 aaKnown RBP12.11□□□□□ -0.47
SRRT-216ENST00000618262 RPL10AP62906 217 aaKnown RBP12.11□□□□□ -0.47
SRRT-216ENST00000618262 CCINQ13939 588 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 C6orf118Q5T5N4 469 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 BHLHA9Q7RTU4 235 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 RALGPS2Q86X27 583 aaPredicted RBP12.11□□□□□ -0.47
SRRT-216ENST00000618262 PALM2Q8IXS6 379 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 TAB3Q8N5C8 712 aaPredicted RBP12.11□□□□□ -0.47
SRRT-216ENST00000618262 ARFGAP1Q8N6T3 406 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 ITFG1Q8TB96 612 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 MRPL38Q96DV4 380 aaKnown RBP12.11□□□□□ -0.47
SRRT-216ENST00000618262 FUBP3Q96I24 572 aaKnown RBP eCLIP12.11□□□□□ -0.47
SRRT-216ENST00000618262 REXO5Q96IC2 774 aaKnown RBP12.11□□□□□ -0.47
SRRT-216ENST00000618262 MS4A14Q96JA4 679 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 ZNF184Q99676 751 aaPredicted RBP12.11□□□□□ -0.47
SRRT-216ENST00000618262 ANLNQ9NQW6 1124 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 DNMT3BQ9UBC3 853 aaKnown RBP12.11□□□□□ -0.47
SRRT-216ENST00000618262 ENOPH1Q9UHY7 261 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 DMDP11532 3685 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 GOLGA8QA0A0J9YX86 632 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 GOLGA8OA6NCC3 632 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 CCDC160A6NGH7 325 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 SLC9B1P1A6NJY1 282 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 A8MVJ9 347 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 GOLGA8NF8WBI6 632 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 PSMD11O00231 422 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 PEX1O43933 1283 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 TLR5O60602 858 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 OR6B1O95007 311 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 GAS8O95995 478 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 FUCA1P04066 466 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 RARGP13631 454 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 ITGAXP20702 1163 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 SDC4P31431 198 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 ARHGDIAP52565 204 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 PLEKHA7Q6IQ23 1121 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 IDO2Q6ZQW0 420 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 RNF139Q8WU17 664 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 SMG7Q92540 1137 aaKnown RBP12.11□□□□□ -0.47
SRRT-216ENST00000618262 MCRS1Q96EZ8 462 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 HSFY1Q96LI6 401 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 SLITRK1Q96PX8 696 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 EPS8L2Q9H6S3 715 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 PIGVQ9NUD9 493 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 FBXW11Q9UKB1 542 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 DUSP12Q9UNI6 340 aa12.11□□□□□ -0.47
SRRT-216ENST00000618262 TMEM191CA6NGB0 347 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 ZSCAN5CA6NGD5 496 aaPredicted RBP12.1□□□□□ -0.47
SRRT-216ENST00000618262 VILLO15195 856 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 CKMP06732 381 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 KCNA5P22460 613 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 IL1R2P27930 398 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 KCNQ1P51787 676 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms