RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 LINC01553A4QN01 128 aa17.35■□□□□ 0.37
PCDHGC3-205ENST00000617641 NEMP2A6NFY4 417 aa17.35■□□□□ 0.37
PCDHGC3-205ENST00000617641 ARHGEF15O94989 841 aa17.35■□□□□ 0.37
PCDHGC3-205ENST00000617641 WISP3O95389 354 aaPredicted RBP17.35■□□□□ 0.37
PCDHGC3-205ENST00000617641 BMP1P13497 986 aa17.35■□□□□ 0.37
PCDHGC3-205ENST00000617641 ALOX15P16050 662 aaPredicted RBP17.35■□□□□ 0.37
PCDHGC3-205ENST00000617641 MPSTP25325 297 aa17.35■□□□□ 0.37
PCDHGC3-205ENST00000617641 IDH3AP50213 366 aa17.35■□□□□ 0.37
PCDHGC3-205ENST00000617641 TIAL1Q01085 375 aaKnown RBP eCLIP17.35■□□□□ 0.37
PCDHGC3-205ENST00000617641 KRT72Q14CN4 511 aa17.35■□□□□ 0.37
PCDHGC3-205ENST00000617641 TYSND1Q2T9J0 566 aa17.35■□□□□ 0.37
PCDHGC3-205ENST00000617641 TREML1Q86YW5 311 aa17.35■□□□□ 0.37
PCDHGC3-205ENST00000617641 FIBINQ8TAL6 211 aa17.35■□□□□ 0.37
PCDHGC3-205ENST00000617641 SCG3Q8WXD2 468 aaKnown RBP17.35■□□□□ 0.37
PCDHGC3-205ENST00000617641 DRC3Q9H069 523 aa17.35■□□□□ 0.37
PCDHGC3-205ENST00000617641 DNAJC28Q9NX36 388 aa17.35■□□□□ 0.37
PCDHGC3-205ENST00000617641 KIAA1522Q9P206 1035 aaPredicted RBP17.35■□□□□ 0.37
PCDHGC3-205ENST00000617641 LNPEPQ9UIQ6 1025 aa17.35■□□□□ 0.37
PCDHGC3-205ENST00000617641 INTS6Q9UL03 887 aaKnown RBP17.35■□□□□ 0.37
PCDHGC3-205ENST00000617641 FNDC3AQ9Y2H6 1198 aaKnown RBP17.35■□□□□ 0.37
PCDHGC3-205ENST00000617641 MGRN1O60291 552 aa17.35■□□□□ 0.37
PCDHGC3-205ENST00000617641 MOSPD3O75425 235 aa17.35■□□□□ 0.37
PCDHGC3-205ENST00000617641 FDXRP22570 491 aa17.35■□□□□ 0.37
PCDHGC3-205ENST00000617641 CDKN1CP49918 316 aaPredicted RBP17.35■□□□□ 0.37
PCDHGC3-205ENST00000617641 RASSF2P50749 326 aa17.35■□□□□ 0.37
PCDHGC3-205ENST00000617641 PRKAA2P54646 552 aa17.35■□□□□ 0.37
PCDHGC3-205ENST00000617641 RCN2Q14257 317 aa17.35■□□□□ 0.37
PCDHGC3-205ENST00000617641 FAM91A1Q658Y4 838 aa17.35■□□□□ 0.37
PCDHGC3-205ENST00000617641 CAMK1DQ8IU85 385 aa17.35■□□□□ 0.37
PCDHGC3-205ENST00000617641 PARP9Q8IXQ6 854 aa17.35■□□□□ 0.37
PCDHGC3-205ENST00000617641 TTC30BQ8N4P2 665 aa17.35■□□□□ 0.37
PCDHGC3-205ENST00000617641 FAM136AQ96C01 138 aa17.35■□□□□ 0.37
PCDHGC3-205ENST00000617641 EVLQ9UI08 416 aaPredicted RBP17.35■□□□□ 0.37
PCDHGC3-205ENST00000617641 FKBPLQ9UIM3 349 aa17.35■□□□□ 0.37
PCDHGC3-205ENST00000617641 UBA6A0AVT1 1052 aaPredicted RBP17.34■□□□□ 0.37
PCDHGC3-205ENST00000617641 CAPN14A8MX76 684 aa17.34■□□□□ 0.37
PCDHGC3-205ENST00000617641 FZD6O60353 706 aa17.34■□□□□ 0.37
PCDHGC3-205ENST00000617641 CCDC22O60826 627 aa17.34■□□□□ 0.37
PCDHGC3-205ENST00000617641 RHOP08100 348 aa17.34■□□□□ 0.37
PCDHGC3-205ENST00000617641 MYOGP15173 224 aa17.34■□□□□ 0.37
PCDHGC3-205ENST00000617641 EPCAMP16422 314 aa17.34■□□□□ 0.37
PCDHGC3-205ENST00000617641 CTPS1P17812 591 aa17.34■□□□□ 0.37
PCDHGC3-205ENST00000617641 PSMA3P25788 255 aa17.34■□□□□ 0.37
PCDHGC3-205ENST00000617641 EPHB1P54762 984 aa17.34■□□□□ 0.37
PCDHGC3-205ENST00000617641 MYO7AQ13402 2215 aa17.34■□□□□ 0.37
PCDHGC3-205ENST00000617641 SLC5A9Q2M3M2 681 aa17.34■□□□□ 0.37
PCDHGC3-205ENST00000617641 PLEKHG6Q3KR16 790 aa17.34■□□□□ 0.37
PCDHGC3-205ENST00000617641 ARL13AQ5H913 290 aaPredicted RBP17.34■□□□□ 0.37
PCDHGC3-205ENST00000617641 KLC3Q6P597 504 aa17.34■□□□□ 0.37
PCDHGC3-205ENST00000617641 ACDQ96AP0 544 aa17.34■□□□□ 0.37
PCDHGC3-205ENST00000617641 SHCBP1LQ9BZQ2 653 aa17.34■□□□□ 0.37
PCDHGC3-205ENST00000617641 POMKQ9H5K3 350 aa17.34■□□□□ 0.37
PCDHGC3-205ENST00000617641 STN1Q9H668 368 aaKnown RBP17.34■□□□□ 0.37
PCDHGC3-205ENST00000617641 TLE6Q9H808 572 aa17.34■□□□□ 0.37
PCDHGC3-205ENST00000617641 A8MUI8 341 aa17.33■□□□□ 0.37
PCDHGC3-205ENST00000617641 TRAFD1O14545 582 aaPredicted RBP17.33■□□□□ 0.37
PCDHGC3-205ENST00000617641 DIAPH2O60879 1101 aa17.33■□□□□ 0.37
PCDHGC3-205ENST00000617641 PIGNO95427 931 aa17.33■□□□□ 0.37
PCDHGC3-205ENST00000617641 PRAMEF12O95522 483 aa17.33■□□□□ 0.37
PCDHGC3-205ENST00000617641 SERPINA6P08185 405 aa17.33■□□□□ 0.37
PCDHGC3-205ENST00000617641 PTPN2P17706 415 aa17.33■□□□□ 0.37
PCDHGC3-205ENST00000617641 PFKLP17858 780 aa17.33■□□□□ 0.37
PCDHGC3-205ENST00000617641 PTPN4P29074 926 aa17.33■□□□□ 0.37
PCDHGC3-205ENST00000617641 GKP32189 559 aa17.33■□□□□ 0.37
PCDHGC3-205ENST00000617641 EPHA5P54756 1037 aa17.33■□□□□ 0.37
PCDHGC3-205ENST00000617641 AP1S1P61966 158 aa17.33■□□□□ 0.37
PCDHGC3-205ENST00000617641 NTHL1P78549 312 aa17.33■□□□□ 0.37
PCDHGC3-205ENST00000617641 CAMK1Q14012 370 aa17.33■□□□□ 0.37
PCDHGC3-205ENST00000617641 UBAP2LQ14157 1087 aaKnown RBP17.33■□□□□ 0.37
PCDHGC3-205ENST00000617641 CCNYL1Q8N7R7 359 aa17.33■□□□□ 0.37
PCDHGC3-205ENST00000617641 MYO19Q96H55 970 aa17.33■□□□□ 0.37
PCDHGC3-205ENST00000617641 AARSD1Q9BTE6 412 aaKnown RBP17.33■□□□□ 0.37
PCDHGC3-205ENST00000617641 TUBB6Q9BUF5 446 aa17.33■□□□□ 0.37
PCDHGC3-205ENST00000617641 TBC1D10AQ9BXI6 508 aa17.33■□□□□ 0.37
PCDHGC3-205ENST00000617641 ILKAPQ9H0C8 392 aaPredicted RBP17.33■□□□□ 0.37
PCDHGC3-205ENST00000617641 TNKS2Q9H2K2 1166 aa17.33■□□□□ 0.37
PCDHGC3-205ENST00000617641 FAM96AQ9H5X1 160 aa17.33■□□□□ 0.37
PCDHGC3-205ENST00000617641 COG4Q9H9E3 785 aa17.33■□□□□ 0.37
PCDHGC3-205ENST00000617641 ABCB8Q9NUT2 735 aa17.33■□□□□ 0.37
PCDHGC3-205ENST00000617641 APOBEC2Q9Y235 224 aaKnown RBP17.33■□□□□ 0.37
PCDHGC3-205ENST00000617641 GRM6O15303 877 aa17.33■□□□□ 0.36
PCDHGC3-205ENST00000617641 STX7O15400 261 aaKnown RBP17.33■□□□□ 0.36
PCDHGC3-205ENST00000617641 CYBBP04839 570 aa17.33■□□□□ 0.36
PCDHGC3-205ENST00000617641 ENO1P06733 434 aaKnown RBP17.33■□□□□ 0.36
PCDHGC3-205ENST00000617641 KCNA5P22460 613 aa17.33■□□□□ 0.36
PCDHGC3-205ENST00000617641 ATP5F1P24539 256 aaPredicted RBP17.33■□□□□ 0.36
PCDHGC3-205ENST00000617641 CTSOP43234 321 aaPredicted RBP17.33■□□□□ 0.36
PCDHGC3-205ENST00000617641 PFKPQ01813 784 aa17.33■□□□□ 0.36
PCDHGC3-205ENST00000617641 RALGPS1Q5JS13 557 aa17.33■□□□□ 0.36
PCDHGC3-205ENST00000617641 LSMEM2Q8N112 164 aa17.33■□□□□ 0.36
PCDHGC3-205ENST00000617641 PHOSPHO2Q8TCD6 241 aa17.33■□□□□ 0.36
PCDHGC3-205ENST00000617641 USP13Q92995 863 aaPredicted RBP17.33■□□□□ 0.36
PCDHGC3-205ENST00000617641 RPL10LQ96L21 214 aaKnown RBP17.33■□□□□ 0.36
PCDHGC3-205ENST00000617641 CCDC106Q9BWC9 280 aa17.33■□□□□ 0.36
PCDHGC3-205ENST00000617641 CYP4F12Q9HCS2 524 aa17.33■□□□□ 0.36
PCDHGC3-205ENST00000617641 INTS10Q9NVR2 710 aaKnown RBP17.33■□□□□ 0.36
PCDHGC3-205ENST00000617641 CORO1CQ9ULV4 474 aaPredicted RBP17.33■□□□□ 0.36
PCDHGC3-205ENST00000617641 RAP2CQ9Y3L5 183 aa17.33■□□□□ 0.36
PCDHGC3-205ENST00000617641 HNRNPCL1O60812 293 aaKnown RBP17.32■□□□□ 0.36
PCDHGC3-205ENST00000617641 PGLSO95336 258 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms