RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 CHRNB2P17787 502 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 L1CAMP32004 1257 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 UGT1A5P35504 534 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 SERPINH1P50454 418 aaKnown RBP8.63□□□□□ -1.03
GPC6-202ENST00000617456 SUOXP51687 545 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 ZNF135P52742 658 aaPredicted RBP8.63□□□□□ -1.03
GPC6-202ENST00000617456 COPB1P53618 953 aaKnown RBP8.63□□□□□ -1.03
GPC6-202ENST00000617456 YBEYP58557 167 aaPredicted RBP8.63□□□□□ -1.03
GPC6-202ENST00000617456 CYP4F2P78329 520 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 CCL7P80098 99 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 GNA12Q03113 381 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 PTP4A2Q12974 167 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 SLMAPQ14BN4 828 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 CCDC14Q49A88 953 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 ALFQ53S48 1182 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 INO80DQ53TQ3 878 aaPredicted RBP8.63□□□□□ -1.03
GPC6-202ENST00000617456 CCDC183Q5T5S1 534 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 FAXCQ5TGI0 409 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 NAA35Q5VZE5 725 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 ESRP1Q6NXG1 681 aaKnown RBP8.63□□□□□ -1.03
GPC6-202ENST00000617456 ZNF574Q6ZN55 896 aaPredicted RBP8.63□□□□□ -1.03
GPC6-202ENST00000617456 PARS2Q7L3T8 475 aaKnown RBP8.63□□□□□ -1.03
GPC6-202ENST00000617456 RAB11FIP2Q7L804 512 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 TFAP2DQ7Z6R9 452 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 PHACTR4Q8IZ21 702 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 OR7D4Q8NG98 312 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 HCAR2Q8TDS4 363 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 BTN2A2Q8WVV5 523 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 NAT6Q93015 286 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 LRRC45Q96CN5 670 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 ARHGEF26Q96DR7 871 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 MS4A3Q96HJ5 214 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 RBM41Q96IZ5 413 aaKnown RBP8.63□□□□□ -1.03
GPC6-202ENST00000617456 CFAP57Q96MR6 1250 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 EPAS1Q99814 870 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 SLC39A3Q9BRY0 314 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 LRRC61Q9BV99 259 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 BOCQ9BWV1 1114 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 EDEM3Q9BZQ6 932 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 SLC13A1Q9BZW2 595 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 PHACTR1Q9C0D0 580 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 STRADBQ9C0K7 418 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 ZDHHC6Q9H6R6 413 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 ANLNQ9NQW6 1124 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 FAM207AQ9NSI2 230 aaPredicted RBP8.63□□□□□ -1.03
GPC6-202ENST00000617456 TMEM248Q9NWD8 314 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 MKS1Q9NXB0 559 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 TAB2Q9NYJ8 693 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 ADAM22Q9P0K1 906 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 PISDQ9UG56 409 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 GGT7Q9UJ14 662 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 CROTQ9UKG9 612 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 TMCC3Q9ULS5 477 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 HPCAL4Q9UM19 191 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 DOLKQ9UPQ8 538 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 WASF2Q9Y6W5 498 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 COL27A1Q8IZC6 1860 aaPredicted RBP8.62□□□□□ -1.03
GPC6-202ENST00000617456 WASH4PA8MWX3 477 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 BOLA2-SMG1P6H3BVE0 249 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 TOR1BO14657 336 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 YY2O15391 372 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 NOBOXO60393 691 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 SRGAP2O75044 1071 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 ZNF821O75541 412 aaPredicted RBP8.62□□□□□ -1.03
GPC6-202ENST00000617456 JMJD7P0C870 316 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 GZMAP12544 262 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 TSHRP16473 764 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 ITGB6P18564 788 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 TFE3P19532 575 aaPredicted RBP8.62□□□□□ -1.03
GPC6-202ENST00000617456 CCNCP24863 283 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 ITGB7P26010 798 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 GKP32189 559 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 ZNF143P52747 638 aaPredicted RBP8.62□□□□□ -1.03
GPC6-202ENST00000617456 THOP1P52888 689 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 INHBCP55103 352 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 PFN3P60673 137 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 FOXK1P85037 733 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 UBXN1Q04323 297 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 SNX1Q13596 522 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 TBR1Q16650 682 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 CLEC16AQ2KHT3 1053 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 CCDC38Q502W7 563 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 LRRC23Q53EV4 343 aaPredicted RBP8.62□□□□□ -1.03
GPC6-202ENST00000617456 HSP90AA4PQ58FG1 418 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 CARD16Q5EG05 197 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 MANEAQ5SRI9 462 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 XKR5Q6UX68 686 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 APTXQ7Z2E3 356 aaKnown RBP8.62□□□□□ -1.03
GPC6-202ENST00000617456 VPS36Q86VN1 386 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 NLRP14Q86W24 1093 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 FAM131BQ86XD5 332 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 ZFAND4Q86XD8 727 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 RYBPQ8N488 228 aaPredicted RBP8.62□□□□□ -1.03
GPC6-202ENST00000617456 PIP4P2Q8N4L2 257 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 OR6K2Q8NGY2 324 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 WDR48Q8TAF3 677 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 RXFP2Q8WXD0 754 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 CCDC74AQ96AQ1 378 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 LIN37Q96GY3 246 aaPredicted RBP8.62□□□□□ -1.03
GPC6-202ENST00000617456 CABS1Q96KC9 395 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms