RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 MUCL1Q96DR8 90 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 PLEKHG4BQ96PX9 1271 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 ZNF559Q9BR84 538 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 CARS2Q9HA77 564 aaKnown RBP3.36□□□□□ -1.87
LPP-220ENST00000617246 KCNK13Q9HB14 408 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 EXD2Q9NVH0 621 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 SLC39A1Q9NY26 324 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 HSPBP1Q9NZL4 362 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 CXXC1Q9P0U4 656 aaPredicted RBP3.36□□□□□ -1.87
LPP-220ENST00000617246 TUBGCP4Q9UGJ1 667 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 TBX20Q9UMR3 447 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 KCNJ13O60928 360 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 LYNP07948 512 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 SYT1P21579 422 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 ADCY8P40145 1251 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 MEF2AQ02078 507 aaPredicted RBP3.36□□□□□ -1.87
LPP-220ENST00000617246 ENPP7Q6UWV6 458 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 XKR5Q6UX68 686 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 OR5L2Q8NGL0 311 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 CSPG4P5Q96PW8 444 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 EMC9Q9Y3B6 208 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 ANKRD36A6QL64 1941 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 CHADO15335 359 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 IFNA14P01570 189 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 GLULP15104 373 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 PLCG1P19174 1290 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 SLC1A1P43005 524 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 GCNT1Q02742 428 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 FGFBP1Q14512 234 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 TMEM198Q66K66 360 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 GRASPQ7Z6J2 395 aaPredicted RBP3.36□□□□□ -1.87
LPP-220ENST00000617246 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.36□□□□□ -1.87
LPP-220ENST00000617246 RAD54LQ92698 747 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 AP3D1O14617 1153 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 ZNF208O43345 1280 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 SOX6P35712 828 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 SLC29A2Q14542 456 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 KCNJ8Q15842 424 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 ACSM2BQ68CK6 577 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 ZCWPW1Q9H0M4 648 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 CPNE7Q9UBL6 633 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 SGTAO43765 313 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 PAHP00439 452 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 CTSAP10619 480 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 H2AFXP16104 143 aaPredicted RBP3.36□□□□□ -1.87
LPP-220ENST00000617246 OGNP20774 298 aaKnown RBP3.36□□□□□ -1.87
LPP-220ENST00000617246 PPP4CP60510 307 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 Q4G0T1 1027 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 RTP2Q5QGT7 225 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 MARC1Q5VT66 337 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 KRT80Q6KB66 452 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 ANKRD26P1Q6NSI1 321 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 CAMKVQ8NCB2 501 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 TSPAN14Q8NG11 270 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 BCAS4Q8TDM0 211 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 NEK7Q8TDX7 302 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 CENPTQ96BT3 561 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 RSRC1Q96IZ7 334 aaKnown RBP3.36□□□□□ -1.87
LPP-220ENST00000617246 ZNF668Q96K58 619 aaPredicted RBP3.36□□□□□ -1.87
LPP-220ENST00000617246 SENP8Q96LD8 212 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 GPR34Q9UPC5 381 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 C2orf72A6NCS6 295 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 SOBPA7XYQ1 873 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 ENDOD1O94919 500 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 MC3RP41968 323 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 PMS1P54277 932 aaKnown RBP3.36□□□□□ -1.87
LPP-220ENST00000617246 POM121L1PQ3SYA9 428 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 ZPBP2Q6X784 338 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 LPCAT1Q8NF37 534 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 IRGQQ8WZA9 623 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 PDCD10Q9BUL8 212 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 GPR61Q9BZJ8 451 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 TMEM9Q9P0T7 183 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 GUCA1BQ9UMX6 200 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 A0A1B0GW55 424 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 TRAPPC6AO75865 159 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 PDE5AO76074 875 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 HLA-DQA2P01906 255 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 DUX4L2P0CJ85 424 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 DUX4L3P0CJ86 424 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 DUX4L4P0CJ87 422 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 DUX4L5P0CJ88 424 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 DUX4L6P0CJ89 424 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 DUX4L7P0CJ90 424 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 EEF1DP29692 281 aaKnown RBP3.36□□□□□ -1.87
LPP-220ENST00000617246 CAPZA1P52907 286 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 RPS6KA1Q15418 735 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 TMEM201Q5SNT2 666 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 LBX2Q6XYB7 198 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 SYT12Q8IV01 421 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 ZC3H7AQ8IWR0 971 aaKnown RBP3.36□□□□□ -1.87
LPP-220ENST00000617246 SLC5A8Q8N695 610 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 CCDC197Q8NCU1 140 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 BLOC1S5Q8TDH9 187 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 LRIG1Q96JA1 1093 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 ADAD1Q96M93 576 aaKnown RBP3.36□□□□□ -1.87
LPP-220ENST00000617246 LY9Q9HBG7 655 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.36□□□□□ -1.87
LPP-220ENST00000617246 DUX4Q9UBX2 424 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 AURKCQ9UQB9 309 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms