RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 TCAF2A6NFQ2 919 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 UBFD1O14562 309 aaKnown RBP13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 NPHS1O60500 1241 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 MYCP01106 439 aaPredicted RBP13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 PMLP29590 882 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 HTR7P34969 479 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 CLCN5P51795 746 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 ACLYP53396 1101 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 ZNF423Q2M1K9 1284 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 TRIM71Q2Q1W2 868 aaKnown RBP13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 FOXB2Q5VYV0 432 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 MFN1Q8IWA4 741 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 ZNF683Q8IZ20 524 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 ICA1LQ8NDH6 482 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 ARRDC2Q8TBH0 407 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 PDCD6IPQ8WUM4 868 aaKnown RBP13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 MRPL1Q9BYD6 325 aaKnown RBP13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 TSR3Q9UJK0 312 aaKnown RBP13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 FAM50BQ9Y247 325 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 SPO11Q9Y5K1 396 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 TMEM88BA6NKF7 163 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 UBDO15205 165 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 GLP2RO95838 553 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 SLC10A3P09131 477 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 PTK2BQ14289 1009 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 FASTKQ14296 549 aaKnown RBP13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 SEMA3AQ14563 771 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 PIGGQ5H8A4 983 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 ANKK1Q8NFD2 765 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 PTERQ96BW5 349 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 RMDN1Q96DB5 314 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 CCDC28BQ9BUN5 200 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 SEMA6AQ9H2E6 1030 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 TLR8Q9NR97 1041 aaKnown RBP13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 DTNAQ9Y4J8 743 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 NCF1BA6NI72 391 aaPredicted RBP13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 NCF1CA8MVU1 366 aaPredicted RBP13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 CA12O43570 354 aa13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 LDB2O43679 373 aa13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 TLR5O60602 858 aa13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 NCF1P14598 390 aaPredicted RBP13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 VCLP18206 1134 aa13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 ME2P23368 584 aa13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 PFKPQ01813 784 aa13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 DSC1Q08554 894 aa13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 CLPPQ16740 277 aaPredicted RBP13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 PFKFB4Q16877 469 aa13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 PITRM1Q5JRX3 1037 aa13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 CYP2R1Q6VVX0 501 aa13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 PQLC1Q8N2U9 271 aa13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 CPSF7Q8N684 471 aaKnown RBP13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 PCSK9Q8NBP7 692 aaKnown RBP13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 TSPAN17Q96FV3 270 aa13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 SLC45A3Q96JT2 553 aa13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 PPP1R2P1Q96PQ5 205 aa13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 CORO1BQ9BR76 489 aa13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 VCX3BQ9H321 246 aa13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 EML4Q9HC35 981 aaKnown RBP13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 TRAF6Q9Y4K3 522 aa13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 FNDC1Q4ZHG4 1894 aaPredicted RBP13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 CCDC162PA2VCL2 907 aa13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 CD3EAPO15446 510 aaKnown RBP13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 RBP1P09455 135 aa13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 ATXN1LP0C7T5 689 aaKnown RBP13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 UQCRBP14927 111 aa13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 RPL17P18621 184 aaKnown RBP13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 CLCN2P51788 898 aa13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 FOLH1Q04609 750 aa13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 PTPRRQ15256 657 aa13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 C4orf46Q504U0 113 aa13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 LRRC23Q53EV4 343 aaPredicted RBP13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 NADSYN1Q6IA69 706 aa13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 CCSAPQ6IQ19 270 aaPredicted RBP13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 PAOXQ6QHF9 649 aa13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 PRSS55Q6UWB4 352 aaPredicted RBP13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 KIAA0408Q6ZU52 694 aa13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 ISCA2Q86U28 154 aa13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 LCA5Q86VQ0 697 aa13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 LRRC49Q8IUZ0 686 aa13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 PEX5LQ8IYB4 626 aa13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 PGAM4Q8N0Y7 254 aa13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 C8orf48Q96LL4 319 aa13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 GLT1D1Q96MS3 346 aa13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 ZNF385DQ9H6B1 395 aa13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 ARNT2Q9HBZ2 717 aa13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 VPS45Q9NRW7 570 aa13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 PRPF19Q9UMS4 504 aaKnown RBP13.9□□□□□ -0.18
CACNA1C-231ENST00000616390 UBXN8O00124 270 aa13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 PSMD12O00232 456 aaPredicted RBP13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 DNAJA2O60884 412 aa13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 SOX11P35716 441 aa13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 POLD2P49005 469 aa13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 SERINC3Q13530 473 aa13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 ACAP2Q15057 778 aa13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 TRIP4Q15650 581 aaPredicted RBP13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 MSANTD2Q6P1R3 559 aa13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 FBXL19Q6PCT2 694 aa13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 RNF180Q86T96 592 aa13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 CCDC117Q8IWD4 279 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms