RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 CRTC3Q6UUV7 619 aa13.19□□□□□ -0.3
MSH6-214ENST00000616033 AGBL3Q8NEM8 1001 aa13.19□□□□□ -0.3
MSH6-214ENST00000616033 GLMNQ92990 594 aa13.19□□□□□ -0.3
MSH6-214ENST00000616033 C1QTNF1Q9BXJ1 281 aa13.19□□□□□ -0.3
MSH6-214ENST00000616033 FSD1LQ9BXM9 530 aa13.19□□□□□ -0.3
MSH6-214ENST00000616033 IL22Q9GZX6 179 aa13.19□□□□□ -0.3
MSH6-214ENST00000616033 CCDC68Q9H2F9 335 aa13.19□□□□□ -0.3
MSH6-214ENST00000616033 SMPD3Q9NY59 655 aaPredicted RBP13.19□□□□□ -0.3
MSH6-214ENST00000616033 MAP3K20Q9NYL2 800 aaKnown RBP13.19□□□□□ -0.3
MSH6-214ENST00000616033 NUDT5Q9UKK9 219 aa13.19□□□□□ -0.3
MSH6-214ENST00000616033 FZD10Q9ULW2 581 aa13.19□□□□□ -0.3
MSH6-214ENST00000616033 OR51F1A6NGY5 319 aa13.19□□□□□ -0.3
MSH6-214ENST00000616033 GNGT2O14610 69 aa13.19□□□□□ -0.3
MSH6-214ENST00000616033 ENO2P09104 434 aaPredicted RBP13.19□□□□□ -0.3
MSH6-214ENST00000616033 MAP3K7CLP57077 242 aa13.19□□□□□ -0.3
MSH6-214ENST00000616033 GPR158Q5T848 1215 aa13.19□□□□□ -0.3
MSH6-214ENST00000616033 XRRA1Q6P2D8 792 aa13.19□□□□□ -0.3
MSH6-214ENST00000616033 ABI1Q8IZP0 508 aa13.19□□□□□ -0.3
MSH6-214ENST00000616033 SCAIQ8N9R8 606 aa13.19□□□□□ -0.3
MSH6-214ENST00000616033 RSPH1Q8WYR4 309 aa13.19□□□□□ -0.3
MSH6-214ENST00000616033 SEPT8Q92599 483 aa13.19□□□□□ -0.3
MSH6-214ENST00000616033 GPR22Q99680 433 aa13.19□□□□□ -0.3
MSH6-214ENST00000616033 AKTIPQ9H8T0 292 aa13.19□□□□□ -0.3
MSH6-214ENST00000616033 MRPL40Q9NQ50 206 aaKnown RBP13.19□□□□□ -0.3
MSH6-214ENST00000616033 VPS28Q9UK41 221 aa13.19□□□□□ -0.3
MSH6-214ENST00000616033 NUP214P35658 2090 aaPredicted RBP13.18□□□□□ -0.3
MSH6-214ENST00000616033 A8MT66 165 aa13.18□□□□□ -0.3
MSH6-214ENST00000616033 ALDOCP09972 364 aaKnown RBP13.18□□□□□ -0.3
MSH6-214ENST00000616033 CAPN3P20807 821 aa13.18□□□□□ -0.3
MSH6-214ENST00000616033 DIO3P55073 304 aa13.18□□□□□ -0.3
MSH6-214ENST00000616033 FOXA1P55317 472 aa13.18□□□□□ -0.3
MSH6-214ENST00000616033 SPCS2Q15005 226 aa13.18□□□□□ -0.3
MSH6-214ENST00000616033 MOGQ16653 247 aa13.18□□□□□ -0.3
MSH6-214ENST00000616033 FAM214AQ32MH5 1076 aa13.18□□□□□ -0.3
MSH6-214ENST00000616033 FAAH2Q6GMR7 532 aa13.18□□□□□ -0.3
MSH6-214ENST00000616033 ITIH5Q86UX2 942 aa13.18□□□□□ -0.3
MSH6-214ENST00000616033 GBA3Q9H227 469 aa13.18□□□□□ -0.3
MSH6-214ENST00000616033 COQ3Q9NZJ6 369 aa13.18□□□□□ -0.3
MSH6-214ENST00000616033 NDUFAF1Q9Y375 327 aa13.18□□□□□ -0.3
MSH6-214ENST00000616033 HGFP14210 728 aa13.18□□□□□ -0.3
MSH6-214ENST00000616033 ATP5F1P24539 256 aaPredicted RBP13.18□□□□□ -0.3
MSH6-214ENST00000616033 NAB1Q13506 487 aa13.18□□□□□ -0.3
MSH6-214ENST00000616033 KCNJ8Q15842 424 aa13.18□□□□□ -0.3
MSH6-214ENST00000616033 MEP1AQ16819 746 aa13.18□□□□□ -0.3
MSH6-214ENST00000616033 TMEM236Q5W0B7 351 aa13.18□□□□□ -0.3
MSH6-214ENST00000616033 SLC26A9Q7LBE3 791 aa13.18□□□□□ -0.3
MSH6-214ENST00000616033 ERO1BQ86YB8 467 aa13.18□□□□□ -0.3
MSH6-214ENST00000616033 FUNDC1Q8IVP5 155 aa13.18□□□□□ -0.3
MSH6-214ENST00000616033 DTX3Q8N9I9 347 aa13.18□□□□□ -0.3
MSH6-214ENST00000616033 NSUN5Q96P11 429 aaKnown RBP13.18□□□□□ -0.3
MSH6-214ENST00000616033 KCTD14Q9BQ13 255 aaPredicted RBP13.18□□□□□ -0.3
MSH6-214ENST00000616033 ZNF385DQ9H6B1 395 aa13.18□□□□□ -0.3
MSH6-214ENST00000616033 SMURF2Q9HAU4 748 aa13.18□□□□□ -0.3
MSH6-214ENST00000616033 PDGFCQ9NRA1 345 aa13.18□□□□□ -0.3
MSH6-214ENST00000616033 ERI2A8K979 691 aaKnown RBP13.17□□□□□ -0.3
MSH6-214ENST00000616033 MYO1DO94832 1006 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 CHEK2O96017 543 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 HSPA1AP0DMV8 641 aaKnown RBP13.17□□□□□ -0.3
MSH6-214ENST00000616033 HSPA1BP0DMV9 641 aaKnown RBP13.17□□□□□ -0.3
MSH6-214ENST00000616033 PRKACGP22612 351 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 MYF6P23409 242 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 CAPGP40121 348 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 CDH17Q12864 832 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 SLC13A2Q13183 592 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 PFKFB4Q16877 469 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 TMC5Q6UXY8 1006 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 CYS1Q717R9 158 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 PIWIL4Q7Z3Z4 852 aaKnown RBP13.17□□□□□ -0.3
MSH6-214ENST00000616033 SLCO6A1Q86UG4 719 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 TRPC4APQ8TEL6 797 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 STARD8Q92502 1023 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 NRBF2Q96F24 287 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 CENPNQ96H22 339 aaPredicted RBP13.17□□□□□ -0.3
MSH6-214ENST00000616033 PDZD7Q9H5P4 517 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 SEMA4BQ9NPR2 832 aaPredicted RBP13.17□□□□□ -0.3
MSH6-214ENST00000616033 ABCB10Q9NRK6 738 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 IPO11Q9UI26 975 aaKnown RBP13.17□□□□□ -0.3
MSH6-214ENST00000616033 CNOT11Q9UKZ1 510 aaKnown RBP13.17□□□□□ -0.3
MSH6-214ENST00000616033 ATP11BQ9Y2G3 1177 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 PCDHGA8Q9Y5G5 932 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 HACD1B0YJ81 288 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 GUCY1B2O75343 617 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 MOCS2O96007 188 aaPredicted RBP13.17□□□□□ -0.3
MSH6-214ENST00000616033 LDLRP01130 860 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 INSRRP14616 1297 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 FSHRP23945 695 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 SHMT2P34897 504 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 PRKAA2P54646 552 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 BST2Q10589 180 aaKnown RBP13.17□□□□□ -0.3
MSH6-214ENST00000616033 FRG1Q14331 258 aaKnown RBP13.17□□□□□ -0.3
MSH6-214ENST00000616033 TIGD2Q4W5G0 525 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 PYCR3Q53H96 274 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 R3HCC1LQ7Z5L2 792 aaKnown RBP13.17□□□□□ -0.3
MSH6-214ENST00000616033 IQCF2Q8IXL9 164 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 PSMA8Q8TAA3 256 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 RDH11Q8TC12 318 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 SH3RF2Q8TEC5 729 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 ANKRD49Q8WVL7 239 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 FZD8Q9H461 694 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 CNGB3Q9NQW8 809 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms