RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 V9GYQ6 96 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 TCRBV7S2A1N4TA0A589 114 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 CCDC154A6NI56 674 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 ULK1O75385 1050 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 RASSF9O75901 435 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 HOXA11P31270 313 aaPredicted RBP9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 RPL3P39023 403 aaKnown RBP9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 PPIDQ08752 370 aaKnown RBP9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 TSTD2Q5T7W7 516 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 SNX30Q5VWJ9 437 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 ZCCHC8Q6NZY4 707 aaKnown RBP9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 GPRIN3Q6ZVF9 776 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 HFE2Q6ZVN8 426 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 UBE2R2Q712K3 238 aaPredicted RBP9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 OR52K2Q8NGK3 314 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 INPP5DQ92835 1189 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 TCF12Q99081 682 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 OSBPL1AQ9BXW6 950 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 GPR62Q9BZJ7 368 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 XYLT2Q9H1B5 865 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 CCDC134Q9H6E4 229 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 PDLIM7Q9NR12 457 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 SALL4Q9UJQ4 1053 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 GGA2Q9UJY4 613 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 TELO2Q9Y4R8 837 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 NRAPQ86VF7 1730 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 C15orf38-AP3S2A0A0A6YYH1 394 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 C9IYK1 514 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 SHBGP04278 402 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 COL6A2P12110 1019 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 BMPR1AP36894 532 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 TRIP10Q15642 601 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 XKR6Q5GH73 641 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 PPP4R4Q6NUP7 873 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 ARPINQ7Z6K5 226 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 KYQ8NBH2 561 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 VPS33AQ96AX1 596 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 TOX2Q96NM4 488 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 FCRL5Q96RD9 977 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 XPR1Q9UBH6 696 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 BLOC1S6Q9UL45 172 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 AP3M1Q9Y2T2 418 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 HS3ST4Q9Y661 456 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 TIAM2Q8IVF5 1701 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 C16orf96A6NNT2 1141 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 H3BQF6 201 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 SLC28A1O00337 649 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 FPGTO14772 594 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 HCRTO43612 131 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 FSBPO95073 299 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 VIPP01282 170 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 KCNQ1P51787 676 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 HK2P52789 917 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 DAB2P98082 770 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 SOX4Q06945 474 aaPredicted RBP9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 TAF1AQ15573 450 aaPredicted RBP9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 FNBP1LQ5T0N5 605 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 ATXN7L2Q5T6C5 722 aaPredicted RBP9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 HECTD2Q5U5R9 776 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 TMEM132CQ8N3T6 1108 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 HDDC3Q8N4P3 179 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 ZBTB2Q8N680 514 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 C10orf53Q8N6V4 93 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 PCDH20Q8N6Y1 951 aaKnown RBP9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 ZFP28Q8NHY6 868 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 RIN3Q8TB24 985 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 ZSCAN18Q8TBC5 510 aaPredicted RBP9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 MAGED4Q96JG8 741 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 CEP19Q96LK0 163 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 TBATAQ96M53 351 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 SLC25A23Q9BV35 468 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 ABCG4Q9H172 646 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 CHRAC1Q9NRG0 131 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 TOGARAM1Q9Y4F4 1720 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 BIRC5O15392 142 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 EIF2S1P05198 315 aaKnown RBP9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 COX7A2P14406 83 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 RRM2P31350 389 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 FRG1Q14331 258 aaKnown RBP9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 LIPMQ5VYY2 423 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 CAPN13Q6MZZ7 669 aaPredicted RBP9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 B3GNT9Q6UX72 402 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 PRR23CQ6ZRP0 262 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 OR10G6Q8NH81 332 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 FANCEQ9HB96 536 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 CROTQ9UKG9 612 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 COLEC10Q9Y6Z7 277 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 LEFTY2O00292 366 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 WDR47O94967 919 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 ABCB1P08183 1280 aaPredicted RBP9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 CDH5P33151 784 aaPredicted RBP9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 GABRB2P47870 512 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 GRIA4P48058 902 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 LRRC32Q14392 662 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 EOGTQ5NDL2 527 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 RNASEH2BQ5TBB1 312 aaKnown RBP9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 PIWIL2Q8TC59 973 aaKnown RBP9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 TMEM40Q8WWA1 233 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 BORCS6Q96GS4 357 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 OXNAD1Q96HP4 312 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms