RNA–Protein interactions for RNA: ENST00000614971.4

LTN1-207, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-207ENST00000614971 PRKAA1Q13131 559 aa3.81□□□□□ -1.8
LTN1-207ENST00000614971 OASLQ15646 514 aaKnown RBP3.81□□□□□ -1.8
LTN1-207ENST00000614971 XKR6Q5GH73 641 aa3.81□□□□□ -1.8
LTN1-207ENST00000614971 RNASEH2BQ5TBB1 312 aaKnown RBP3.81□□□□□ -1.8
LTN1-207ENST00000614971 ZDHHC24Q6UX98 284 aa3.81□□□□□ -1.8
LTN1-207ENST00000614971 SYT12Q8IV01 421 aa3.81□□□□□ -1.8
LTN1-207ENST00000614971 CCNJLQ8IV13 435 aa3.81□□□□□ -1.8
LTN1-207ENST00000614971 ZNF781Q8N8C0 355 aa3.81□□□□□ -1.8
LTN1-207ENST00000614971 SIDT2Q8NBJ9 832 aaKnown RBP3.81□□□□□ -1.8
LTN1-207ENST00000614971 SPPL2BQ8TCT7 592 aa3.81□□□□□ -1.8
LTN1-207ENST00000614971 NRBF2Q96F24 287 aa3.81□□□□□ -1.8
LTN1-207ENST00000614971 SMIM14Q96QK8 99 aa3.81□□□□□ -1.8
LTN1-207ENST00000614971 FIZ1Q96SL8 496 aa3.81□□□□□ -1.8
LTN1-207ENST00000614971 HNRNPABQ99729 332 aaKnown RBP3.81□□□□□ -1.8
LTN1-207ENST00000614971 EBF3Q9H4W6 596 aa3.81□□□□□ -1.8
LTN1-207ENST00000614971 THG1LQ9NWX6 298 aaKnown RBP3.81□□□□□ -1.8
LTN1-207ENST00000614971 IMPAD1Q9NX62 359 aa3.81□□□□□ -1.8
LTN1-207ENST00000614971 DGKBQ9Y6T7 804 aa3.81□□□□□ -1.8
LTN1-207ENST00000614971 SPTBP11277 2137 aa3.81□□□□□ -1.8
LTN1-207ENST00000614971 WDR87Q6ZQQ6 2873 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 CDK5RAP2Q96SN8 1893 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 PSMD12O00232 456 aaPredicted RBP3.8□□□□□ -1.8
LTN1-207ENST00000614971 ATP6V1G2O95670 118 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 CHRNA1P02708 482 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 HLA-DQB2P05538 268 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 OR56A5P0C7T3 313 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 GLDCP23378 1020 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 GRK2P25098 689 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 PTPN4P29074 926 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 TIE1P35590 1138 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 CSKP41240 450 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 SKIV2L2P42285 1042 aaKnown RBP3.8□□□□□ -1.8
LTN1-207ENST00000614971 IDH2P48735 452 aaKnown RBP3.8□□□□□ -1.8
LTN1-207ENST00000614971 RPL14P50914 215 aaKnown RBP3.8□□□□□ -1.8
LTN1-207ENST00000614971 CHRNB3Q05901 458 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 TP53BP2Q13625 1128 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 LRRC38Q5VT99 294 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 STRADAQ7RTN6 431 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 TMPRSS11BQ86T26 416 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 HPS6Q86YV9 775 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 P3H2Q8IVL5 708 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 CENPLQ8N0S6 344 aaPredicted RBP3.8□□□□□ -1.8
LTN1-207ENST00000614971 FITM2Q8N6M3 262 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 OR10T2Q8NGX3 314 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 MAGEE2Q8TD90 523 aaPredicted RBP3.8□□□□□ -1.8
LTN1-207ENST00000614971 SH3RF2Q8TEC5 729 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 DOK4Q8TEW6 326 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 THAP11Q96EK4 314 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 PLEKHA8Q96JA3 519 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 APOLD1Q96LR9 279 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 MTERF1Q99551 399 aaKnown RBP3.8□□□□□ -1.8
LTN1-207ENST00000614971 XYLT2Q9H1B5 865 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 CLDND1Q9NY35 253 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 DEC1Q9P2X7 70 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 RABGEF1Q9UJ41 708 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 MSRAQ9UJ68 235 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 SOX13Q9UN79 622 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 SLC9A8Q9Y2E8 581 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 A0A0U1RQF3 1178 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 GOT2P00505 430 aaKnown RBP3.8□□□□□ -1.8
LTN1-207ENST00000614971 CDK16Q00536 496 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 ECT2LQ008S8 904 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 C4orf22Q6V702 233 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 ARMCX6Q7L4S7 300 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 MMAAQ8IVH4 418 aaKnown RBP3.8□□□□□ -1.8
LTN1-207ENST00000614971 WDTC1Q8N5D0 677 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 KHSRPQ92945 711 aaKnown RBP eCLIP3.8□□□□□ -1.88e-7■□□□□ 10
LTN1-207ENST00000614971 ARMC5Q96C12 935 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 ACBD6Q9BR61 282 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 OSBPL2Q9H1P3 480 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 RRN3Q9NYV6 651 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 COQ4Q9Y3A0 265 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 CCDC88AQ3V6T2 1871 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 SLC38A8A6NNN8 435 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 SMAPO00193 183 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 FGF10O15520 208 aaPredicted RBP3.8□□□□□ -1.8
LTN1-207ENST00000614971 GPR39O43194 453 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 PRSS56P0CW18 603 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 MLNP12872 115 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 NR4A1P22736 598 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 HOXA11P31270 313 aaPredicted RBP3.8□□□□□ -1.8
LTN1-207ENST00000614971 FOXN2P32314 431 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 VEGFBP49765 207 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 IL5RAQ01344 420 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 HYAL2Q12891 473 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 ZBTB17Q13105 803 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 SH3D19Q5HYK7 790 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 ZNF648Q5T619 568 aaPredicted RBP3.8□□□□□ -1.8
LTN1-207ENST00000614971 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.8□□□□□ -1.8
LTN1-207ENST00000614971 CHST9Q7L1S5 443 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 ZC3H7AQ8IWR0 971 aaKnown RBP3.8□□□□□ -1.8
LTN1-207ENST00000614971 RASGEF1CQ8N431 466 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 LMO3Q8TAP4 145 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 CXorf40AQ8TE69 158 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 DNAJA3Q96EY1 480 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 COPS8Q99627 209 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 TMEM79Q9BSE2 394 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 DGCR6LQ9BY27 220 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 YY1AP1Q9H869 796 aa3.8□□□□□ -1.8
LTN1-207ENST00000614971 WDR41Q9HAD4 459 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms