RNA–Protein interactions for RNA: ENST00000614293.4

ABCA2-223, Transcript of ATP binding cassette subfamily A member 2, human

TSL 5 BASIC

Gene ABCA2, Length 8,146 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-223	ENST00000614293	POMK	Q9H5K3	350 aa		12.21	□□□□□ -0.45
ABCA2-223	ENST00000614293	NCDN	Q9UBB6	729 aa		12.21	□□□□□ -0.45
ABCA2-223	ENST00000614293	GNE	Q9Y223	722 aa	Known RBP	12.21	□□□□□ -0.45
ABCA2-223	ENST00000614293	ZDHHC9	Q9Y397	364 aa		12.21	□□□□□ -0.45
ABCA2-223	ENST00000614293	GSS	P48637	474 aa		12.21	□□□□□ -0.45
ABCA2-223	ENST00000614293	AP3S2	P59780	193 aa		12.21	□□□□□ -0.45
ABCA2-223	ENST00000614293	C11orf63	Q6NUN7	778 aa		12.21	□□□□□ -0.45
ABCA2-223	ENST00000614293	THAP5	Q7Z6K1	395 aa		12.21	□□□□□ -0.45
ABCA2-223	ENST00000614293	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	12.21	□□□□□ -0.45
ABCA2-223	ENST00000614293	DPEP2	Q9H4A9	486 aa		12.21	□□□□□ -0.45
ABCA2-223	ENST00000614293	FBXO28	Q9NVF7	368 aa		12.21	□□□□□ -0.45
ABCA2-223	ENST00000614293	THAP1	Q9NVV9	213 aa		12.21	□□□□□ -0.45
ABCA2-223	ENST00000614293	UPB1	Q9UBR1	384 aa		12.21	□□□□□ -0.45
ABCA2-223	ENST00000614293	SPATA31A5	Q5VU36	1347 aa		12.21	□□□□□ -0.45
ABCA2-223	ENST00000614293	SPATA31A7	Q8IWB4	1347 aa		12.21	□□□□□ -0.45
ABCA2-223	ENST00000614293	DDN	O94850	711 aa	Predicted RBP	12.21	□□□□□ -0.46
ABCA2-223	ENST00000614293	SAG	P10523	405 aa	Predicted RBP	12.21	□□□□□ -0.46
ABCA2-223	ENST00000614293	FDPS	P14324	419 aa	Known RBP	12.21	□□□□□ -0.46
ABCA2-223	ENST00000614293	CACNA2D1	P54289	1103 aa		12.21	□□□□□ -0.46
ABCA2-223	ENST00000614293	MRPL49	Q13405	166 aa	Known RBP	12.21	□□□□□ -0.46
ABCA2-223	ENST00000614293	RASA2	Q15283	850 aa		12.21	□□□□□ -0.46
ABCA2-223	ENST00000614293	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	12.21	□□□□□ -0.46
ABCA2-223	ENST00000614293	SLC9B1	Q4ZJI4	515 aa		12.21	□□□□□ -0.46
ABCA2-223	ENST00000614293	OTUD3	Q5T2D3	398 aa	Predicted RBP	12.21	□□□□□ -0.46
ABCA2-223	ENST00000614293	NIPA1	Q7RTP0	329 aa		12.21	□□□□□ -0.46
ABCA2-223	ENST00000614293	PNLDC1	Q8NA58	520 aa	Known RBP	12.21	□□□□□ -0.46
ABCA2-223	ENST00000614293	OVCA2	Q8WZ82	227 aa		12.21	□□□□□ -0.46
ABCA2-223	ENST00000614293	LMLN	Q96KR4	655 aa		12.21	□□□□□ -0.46
ABCA2-223	ENST00000614293	IKZF3	Q9UKT9	509 aa		12.21	□□□□□ -0.46
ABCA2-223	ENST00000614293	MYH7B	A7E2Y1	1941 aa		12.21	□□□□□ -0.46
ABCA2-223	ENST00000614293	OTC	P00480	354 aa		12.21	□□□□□ -0.46
ABCA2-223	ENST00000614293	PRMT2	P55345	433 aa		12.21	□□□□□ -0.46
ABCA2-223	ENST00000614293	VPS26B	Q4G0F5	336 aa		12.21	□□□□□ -0.46
ABCA2-223	ENST00000614293	ZPBP2	Q6X784	338 aa		12.21	□□□□□ -0.46
ABCA2-223	ENST00000614293	MSL3	Q8N5Y2	521 aa	Known RBP	12.21	□□□□□ -0.46
ABCA2-223	ENST00000614293	TCEAL3	Q969E4	200 aa		12.21	□□□□□ -0.46
ABCA2-223	ENST00000614293	LRRC1	Q9BTT6	524 aa		12.21	□□□□□ -0.46
ABCA2-223	ENST00000614293	PCDH9	Q9HC56	1237 aa		12.21	□□□□□ -0.46
ABCA2-223	ENST00000614293	CIDEB	Q9UHD4	219 aa		12.21	□□□□□ -0.46
ABCA2-223	ENST00000614293	ZNF726	A6NNF4	738 aa		12.21	□□□□□ -0.46
ABCA2-223	ENST00000614293	TRDMT1	O14717	391 aa	Known RBP	12.21	□□□□□ -0.46
ABCA2-223	ENST00000614293	SMNDC1	O75940	238 aa	Known RBP eCLIP	12.21	□□□□□ -0.46
ABCA2-223	ENST00000614293	C22orf31	O95567	290 aa		12.21	□□□□□ -0.46
ABCA2-223	ENST00000614293	MAPK7	Q13164	816 aa		12.21	□□□□□ -0.46
ABCA2-223	ENST00000614293	SEZ6	Q53EL9	994 aa		12.21	□□□□□ -0.46
ABCA2-223	ENST00000614293	ZNF730	Q6ZMV8	503 aa		12.21	□□□□□ -0.46
ABCA2-223	ENST00000614293	STRADA	Q7RTN6	431 aa		12.21	□□□□□ -0.46
ABCA2-223	ENST00000614293	ZNF184	Q99676	751 aa	Predicted RBP	12.21	□□□□□ -0.46
ABCA2-223	ENST00000614293	ZSWIM1	Q9BR11	485 aa		12.21	□□□□□ -0.46
ABCA2-223	ENST00000614293	SSR3	Q9UNL2	185 aa		12.21	□□□□□ -0.46
ABCA2-223	ENST00000614293	WASF3	Q9UPY6	502 aa		12.21	□□□□□ -0.46
ABCA2-223	ENST00000614293	CARD8	Q9Y2G2	431 aa		12.21	□□□□□ -0.46
ABCA2-223	ENST00000614293	SH3BGRL	O75368	114 aa		12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	PRKAR1A	P10644	381 aa		12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	MKRN4P	Q13434	485 aa	Predicted RBP	12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	RRP1B	Q14684	758 aa	Known RBP	12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	PGM5	Q15124	567 aa		12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	FAM189A2	Q15884	450 aa		12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	BROX	Q5VW32	411 aa		12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	CAPN13	Q6MZZ7	669 aa	Predicted RBP	12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	ZNF276	Q8N554	614 aa		12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	ALLC	Q8N6M5	410 aa		12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	SLC2A14	Q8TDB8	520 aa		12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	FEM1C	Q96JP0	617 aa		12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	TNKS2	Q9H2K2	1166 aa		12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	ARMCX1	Q9P291	453 aa		12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	GHRL	Q9UBU3	117 aa		12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	PHTF1	Q9UMS5	762 aa		12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	TEX13C	A0A0J9YWL9	993 aa		12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	LPO	P22079	712 aa	Predicted RBP	12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	CSTF2	P33240	577 aa	Known RBP eCLIP	12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	CD86	P42081	329 aa		12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	GDI2	P50395	445 aa	Known RBP	12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	RAB30	Q15771	203 aa		12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	TOR4A	Q9NXH8	423 aa		12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	ING4	Q9UNL4	249 aa		12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	COG5	Q9UP83	839 aa		12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	FAM205A	Q6ZU69	1335 aa		12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	RGSL1	A5PLK6	1076 aa		12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	ZNF823	P16415	610 aa		12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	TARS	P26639	723 aa	Known RBP	12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	SLC7A1	P30825	629 aa		12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	SLC6A3	Q01959	620 aa		12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	NYAP1	Q6ZVC0	841 aa		12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	OFCC1	Q8IZS5	231 aa		12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	GLIS2	Q9BZE0	524 aa	Predicted RBP	12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	OR6C75	A6NL08	312 aa		12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	ATP6V1G2	O95670	118 aa		12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	ARF3	P61204	181 aa	Predicted RBP	12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	ARF1	P84077	181 aa	Known RBP	12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	CDK16	Q00536	496 aa		12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	TMEM63B	Q5T3F8	832 aa		12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	C1orf216	Q8TAB5	229 aa		12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	AIFM2	Q9BRQ8	373 aa		12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	SMURF1	Q9HCE7	757 aa		12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	HHATL	Q9HCP6	504 aa		12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	C19orf25	Q9UFG5	118 aa	Predicted RBP	12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	FAM172BP	A6NC97	362 aa		12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	HAT1	O14929	419 aa		12.2	□□□□□ -0.46
ABCA2-223	ENST00000614293	PON1	P27169	355 aa		12.2	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms