RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 KIR2DL1P43626 348 aaPredicted RBP11.48□□□□□ -0.57
SLIRP-212ENST00000613856 EIF3BP55884 814 aaKnown RBP11.48□□□□□ -0.57
SLIRP-212ENST00000613856 GPX6P59796 221 aa11.48□□□□□ -0.57
SLIRP-212ENST00000613856 LAMB3Q13751 1172 aa11.48□□□□□ -0.57
SLIRP-212ENST00000613856 SLC29A2Q14542 456 aa11.48□□□□□ -0.57
SLIRP-212ENST00000613856 SPANXN3Q5MJ09 141 aa11.48□□□□□ -0.57
SLIRP-212ENST00000613856 CERCAMQ5T4B2 595 aa11.48□□□□□ -0.57
SLIRP-212ENST00000613856 UBAP2Q5T6F2 1119 aaKnown RBP11.48□□□□□ -0.57
SLIRP-212ENST00000613856 EGFLAMQ63HQ2 1017 aa11.48□□□□□ -0.57
SLIRP-212ENST00000613856 ZNF449Q6P9G9 518 aa11.48□□□□□ -0.57
SLIRP-212ENST00000613856 SERPINA13PQ6UXR4 307 aa11.48□□□□□ -0.57
SLIRP-212ENST00000613856 TMEM135Q86UB9 458 aa11.48□□□□□ -0.57
SLIRP-212ENST00000613856 PALM2Q8IXS6 379 aa11.48□□□□□ -0.57
SLIRP-212ENST00000613856 RYBPQ8N488 228 aaPredicted RBP11.48□□□□□ -0.57
SLIRP-212ENST00000613856 SLC25A41Q8N5S1 370 aa11.48□□□□□ -0.57
SLIRP-212ENST00000613856 PPHLN1Q8NEY8 458 aaKnown RBP11.48□□□□□ -0.57
SLIRP-212ENST00000613856 OR6K2Q8NGY2 324 aa11.48□□□□□ -0.57
SLIRP-212ENST00000613856 GSDMBQ8TAX9 411 aa11.48□□□□□ -0.57
SLIRP-212ENST00000613856 ZCCHC14Q8WYQ9 949 aaKnown RBP11.48□□□□□ -0.57
SLIRP-212ENST00000613856 PEX13Q92968 403 aa11.48□□□□□ -0.57
SLIRP-212ENST00000613856 ZC3H10Q96K80 434 aaKnown RBP11.48□□□□□ -0.57
SLIRP-212ENST00000613856 PKNOX2Q96KN3 472 aa11.48□□□□□ -0.57
SLIRP-212ENST00000613856 ACBD3Q9H3P7 528 aa11.48□□□□□ -0.57
SLIRP-212ENST00000613856 PLAC1Q9HBJ0 212 aa11.48□□□□□ -0.57
SLIRP-212ENST00000613856 PIH1D1Q9NWS0 290 aaKnown RBP11.48□□□□□ -0.57
SLIRP-212ENST00000613856 HACD3Q9P035 362 aa11.48□□□□□ -0.57
SLIRP-212ENST00000613856 KLK13Q9UKR3 277 aa11.48□□□□□ -0.57
SLIRP-212ENST00000613856 RIMKLBQ9ULI2 386 aa11.48□□□□□ -0.57
SLIRP-212ENST00000613856 CHKBQ9Y259 395 aa11.48□□□□□ -0.57
SLIRP-212ENST00000613856 TCAF1Q9Y4C2 921 aa11.48□□□□□ -0.57
SLIRP-212ENST00000613856 MAD1L1Q9Y6D9 718 aa11.48□□□□□ -0.57
SLIRP-212ENST00000613856 WASF2Q9Y6W5 498 aa11.48□□□□□ -0.57
SLIRP-212ENST00000613856 CACNA1EQ15878 2313 aa11.48□□□□□ -0.57
SLIRP-212ENST00000613856 BPTFQ12830 3046 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 HEATR9A2RTY3 570 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 ANKRD66B4E2M5 251 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 K7EQS6 105 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 TAF4O00268 1085 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 CDX4O14627 284 aaPredicted RBP11.47□□□□□ -0.57
SLIRP-212ENST00000613856 HYAL3O43820 417 aaPredicted RBP11.47□□□□□ -0.57
SLIRP-212ENST00000613856 TCEA3O75764 348 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 POLBP06746 335 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 PDHA1P08559 390 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 TPH1P17752 444 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 PRKCHP24723 683 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 STX2P32856 288 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 IL12RB1P42701 662 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 CRADDP78560 199 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 GALNT3Q14435 633 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 ELAVL3Q14576 367 aaKnown RBP11.47□□□□□ -0.57
SLIRP-212ENST00000613856 POU6F1Q14863 301 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 CRYMQ14894 314 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 QPCTQ16769 361 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 HP1BP3Q5SSJ5 553 aaPredicted RBP11.47□□□□□ -0.57
SLIRP-212ENST00000613856 C9orf64Q5T6V5 341 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 CASC4Q6P4E1 433 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 GDPD4Q6W3E5 623 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 UNC5AQ6ZN44 842 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 CYS1Q717R9 158 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 NLRP9Q7RTR0 991 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 KDELC2Q7Z4H8 507 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 CAMK1DQ8IU85 385 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 CHST14Q8NCH0 376 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 DEFB124Q8NES8 71 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 LPCAT1Q8NF37 534 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 HCAR2Q8TDS4 363 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 PIH1D2Q8WWB5 315 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 CFAP36Q96G28 342 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 ZIM3Q96PE6 472 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 SRPK1Q96SB4 655 aaKnown RBP11.47□□□□□ -0.57
SLIRP-212ENST00000613856 TMEM109Q9BVC6 243 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 SUV39H2Q9H5I1 410 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 ACSS3Q9H6R3 686 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 ZDHHC6Q9H6R6 413 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 VPS37BQ9H9H4 285 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 PPCSQ9HAB8 311 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 DKK3Q9UBP4 350 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 FETUBQ9UGM5 382 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 SUN2Q9UH99 717 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 IL36AQ9UHA7 158 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 PLAAQ9Y263 795 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 PPIL1Q9Y3C6 166 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 PCDHB9Q9Y5E1 797 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 PCDHGA5Q9Y5G8 931 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 NFS1Q9Y697 457 aa11.47□□□□□ -0.57
SLIRP-212ENST00000613856 ANKRD11Q6UB99 2663 aaPredicted RBP11.47□□□□□ -0.57
SLIRP-212ENST00000613856 SMG1Q96Q15 3661 aaKnown RBP11.46□□□□□ -0.57
SLIRP-212ENST00000613856 A0A0J9YYE9 177 aa11.46□□□□□ -0.57
SLIRP-212ENST00000613856 TCRBV9S1A1TA0A576 114 aa11.46□□□□□ -0.57
SLIRP-212ENST00000613856 MROH6A6NGR9 719 aa11.46□□□□□ -0.57
SLIRP-212ENST00000613856 CAPN8A6NHC0 703 aa11.46□□□□□ -0.57
SLIRP-212ENST00000613856 PCNX2A6NKB5 2137 aa11.46□□□□□ -0.57
SLIRP-212ENST00000613856 SIN3BO75182 1162 aa11.46□□□□□ -0.57
SLIRP-212ENST00000613856 ALDH1A2O94788 518 aa11.46□□□□□ -0.57
SLIRP-212ENST00000613856 TRBC1P01850 177 aa11.46□□□□□ -0.57
SLIRP-212ENST00000613856 PRNPP04156 253 aa11.46□□□□□ -0.57
SLIRP-212ENST00000613856 UGT2B4P06133 528 aa11.46□□□□□ -0.57
SLIRP-212ENST00000613856 IVLP07476 585 aa11.46□□□□□ -0.57
SLIRP-212ENST00000613856 BCKDHBP21953 392 aa11.46□□□□□ -0.57
SLIRP-212ENST00000613856 PSMA3P25788 255 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms