RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 FAM46CQ5VWP2 391 aa13.79□□□□□ -0.2
TMEM254-213ENST00000613758 KIAA1211LQ6NV74 962 aa13.79□□□□□ -0.2
TMEM254-213ENST00000613758 ADGRD1Q6QNK2 874 aa13.79□□□□□ -0.2
TMEM254-213ENST00000613758 PARS2Q7L3T8 475 aaKnown RBP13.79□□□□□ -0.2
TMEM254-213ENST00000613758 LYSMD3Q7Z3D4 306 aa13.79□□□□□ -0.2
TMEM254-213ENST00000613758 OR13J1Q8NGT2 312 aa13.79□□□□□ -0.2
TMEM254-213ENST00000613758 RPLP0P6Q8NHW5 317 aa13.79□□□□□ -0.2
TMEM254-213ENST00000613758 PEX13Q92968 403 aa13.79□□□□□ -0.2
TMEM254-213ENST00000613758 ARRDC3Q96B67 414 aa13.79□□□□□ -0.2
TMEM254-213ENST00000613758 PPP1R16AQ96I34 528 aa13.79□□□□□ -0.2
TMEM254-213ENST00000613758 DNAJC1Q96KC8 554 aaKnown RBP13.79□□□□□ -0.2
TMEM254-213ENST00000613758 LYSMD1Q96S90 227 aa13.79□□□□□ -0.2
TMEM254-213ENST00000613758 SMYD2Q9NRG4 433 aa13.79□□□□□ -0.2
TMEM254-213ENST00000613758 C1orf232A0A0U1RR37 186 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 KRBA1A5PL33 1030 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 NPIPB15A6NHN6 443 aaPredicted RBP13.78□□□□□ -0.2
TMEM254-213ENST00000613758 FAM159BA6NKW6 160 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 CXorf49A8MYA2 514 aaPredicted RBP13.78□□□□□ -0.2
TMEM254-213ENST00000613758 HOXB2P14652 356 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 ZNF140P52738 457 aaPredicted RBP13.78□□□□□ -0.2
TMEM254-213ENST00000613758 GNGT1P63211 74 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 TMPRSS15P98073 1019 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 SMAD1Q15797 465 aaKnown RBP13.78□□□□□ -0.2
TMEM254-213ENST00000613758 KIAA0930Q6ICG6 404 aaPredicted RBP13.78□□□□□ -0.2
TMEM254-213ENST00000613758 CRTC1Q6UUV9 634 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 OR4K2Q8NGD2 314 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 OR13C4Q8NGS5 318 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 OR2T3Q8NH03 318 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 MDM1Q8TC05 714 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 DCAKDQ8WVC6 231 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 HDAC10Q969S8 669 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 MRRFQ96E11 262 aaKnown RBP13.78□□□□□ -0.2
TMEM254-213ENST00000613758 SHDQ96IW2 340 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 PAFAH2Q99487 392 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 ZFYVE1Q9HBF4 777 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 PCDH12Q9NPG4 1184 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 DYRK4Q9NR20 520 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 NLE1Q9NVX2 485 aaPredicted RBP13.78□□□□□ -0.2
TMEM254-213ENST00000613758 MRPS17Q9Y2R5 130 aaKnown RBP13.78□□□□□ -0.2
TMEM254-213ENST00000613758 ATG2BQ96BY7 2078 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 A0A1W2PQF6 199 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 CCL22O00626 93 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 STX7O15400 261 aaKnown RBP13.78□□□□□ -0.2
TMEM254-213ENST00000613758 CLDN7O95471 211 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 CHRNB1P11230 501 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 KCNA4P22459 653 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 NFKBIAP25963 317 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 ARNTP27540 789 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 ATP5DP30049 168 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 ARCN1P48444 511 aaKnown RBP13.78□□□□□ -0.2
TMEM254-213ENST00000613758 ARSDP51689 593 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 SATB1Q01826 763 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 ACVR1Q04771 509 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 HSF5Q4G112 596 aaPredicted RBP13.78□□□□□ -0.2
TMEM254-213ENST00000613758 EOGTQ5NDL2 527 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 PDPK2PQ6A1A2 396 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 ZNF449Q6P9G9 518 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 FBXL19Q6PCT2 694 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 TSPAN33Q86UF1 283 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 TRABD2AQ86V40 505 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 KCNMB4Q86W47 210 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 CTAGE3PQ8IX95 158 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 UBALD2Q8IYN6 164 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 PPM1NQ8N819 430 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 MZB1Q8WU39 189 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 CDKL2Q92772 493 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 EID2BQ96D98 161 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 TBATAQ96M53 351 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 PSMC3IPQ9P2W1 217 aaPredicted RBP13.78□□□□□ -0.2
TMEM254-213ENST00000613758 B4GALT6Q9UBX8 382 aa13.78□□□□□ -0.2
TMEM254-213ENST00000613758 PLK4O00444 970 aa13.77□□□□□ -0.21
TMEM254-213ENST00000613758 RPP40O75818 363 aaKnown RBP13.77□□□□□ -0.21
TMEM254-213ENST00000613758 CYP2A6P11509 494 aaPredicted RBP13.77□□□□□ -0.21
TMEM254-213ENST00000613758 COL9A1P20849 921 aa13.77□□□□□ -0.21
TMEM254-213ENST00000613758 PSMA3P25788 255 aa13.77□□□□□ -0.21
TMEM254-213ENST00000613758 HMGCLP35914 325 aa13.77□□□□□ -0.21
TMEM254-213ENST00000613758 STARD6P59095 220 aa13.77□□□□□ -0.21
TMEM254-213ENST00000613758 CST6Q15828 149 aa13.77□□□□□ -0.21
TMEM254-213ENST00000613758 HSP90AA5PQ58FG0 334 aa13.77□□□□□ -0.21
TMEM254-213ENST00000613758 TAOK1Q7L7X3 1001 aa13.77□□□□□ -0.21
TMEM254-213ENST00000613758 RASSF3Q86WH2 238 aa13.77□□□□□ -0.21
TMEM254-213ENST00000613758 LRRC6Q86X45 466 aa13.77□□□□□ -0.21
TMEM254-213ENST00000613758 ZNF687Q8N1G0 1237 aa13.77□□□□□ -0.21
TMEM254-213ENST00000613758 SLC44A1Q8WWI5 657 aa13.77□□□□□ -0.21
TMEM254-213ENST00000613758 CNOT10Q9H9A5 744 aaKnown RBP13.77□□□□□ -0.21
TMEM254-213ENST00000613758 FBRSQ9HAH7 460 aa13.77□□□□□ -0.21
TMEM254-213ENST00000613758 LMAN1LQ9HAT1 526 aa13.77□□□□□ -0.21
TMEM254-213ENST00000613758 BPIFA1Q9NP55 256 aa13.77□□□□□ -0.21
TMEM254-213ENST00000613758 POLR3BQ9NW08 1133 aaPredicted RBP13.77□□□□□ -0.21
TMEM254-213ENST00000613758 IL17CQ9P0M4 197 aa13.77□□□□□ -0.21
TMEM254-213ENST00000613758 PKP3Q9Y446 797 aa13.77□□□□□ -0.21
TMEM254-213ENST00000613758 GOLGA8TH3BQL2 631 aa13.76□□□□□ -0.21
TMEM254-213ENST00000613758 SLC7A4O43246 635 aa13.76□□□□□ -0.21
TMEM254-213ENST00000613758 ADH1BP00325 375 aa13.76□□□□□ -0.21
TMEM254-213ENST00000613758 TARSP26639 723 aaKnown RBP13.76□□□□□ -0.21
TMEM254-213ENST00000613758 VIPR1P32241 457 aa13.76□□□□□ -0.21
TMEM254-213ENST00000613758 MSH2P43246 934 aa13.76□□□□□ -0.21
TMEM254-213ENST00000613758 COPAP53621 1224 aa13.76□□□□□ -0.21
TMEM254-213ENST00000613758 RPS14P62263 151 aaKnown RBP13.76□□□□□ -0.21
TMEM254-213ENST00000613758 PRAMEP78395 509 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms