RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 C3orf38Q5JPI3 329 aa17.37■□□□□ 0.37
PRKN-209ENST00000612485 IGF2-ASQ6U949 168 aa17.37■□□□□ 0.37
PRKN-209ENST00000612485 NYAP1Q6ZVC0 841 aa17.37■□□□□ 0.37
PRKN-209ENST00000612485 TAF8Q7Z7C8 310 aa17.37■□□□□ 0.37
PRKN-209ENST00000612485 MAML1Q92585 1016 aa17.37■□□□□ 0.37
PRKN-209ENST00000612485 FATE1Q969F0 183 aa17.37■□□□□ 0.37
PRKN-209ENST00000612485 CCDC74AQ96AQ1 378 aa17.37■□□□□ 0.37
PRKN-209ENST00000612485 DTD2Q96FN9 168 aa17.37■□□□□ 0.37
PRKN-209ENST00000612485 ATXN7L3BQ96GX2 97 aa17.37■□□□□ 0.37
PRKN-209ENST00000612485 MCCC1Q96RQ3 725 aaPredicted RBP17.37■□□□□ 0.37
PRKN-209ENST00000612485 LGMNQ99538 433 aa17.37■□□□□ 0.37
PRKN-209ENST00000612485 DNAJC7Q99615 494 aa17.37■□□□□ 0.37
PRKN-209ENST00000612485 SEMA3CQ99985 751 aa17.37■□□□□ 0.37
PRKN-209ENST00000612485 CYP4F12Q9HCS2 524 aa17.37■□□□□ 0.37
PRKN-209ENST00000612485 MRPL40Q9NQ50 206 aaKnown RBP17.37■□□□□ 0.37
PRKN-209ENST00000612485 THSD1Q9NS62 852 aa17.37■□□□□ 0.37
PRKN-209ENST00000612485 AMACRQ9UHK6 382 aa17.37■□□□□ 0.37
PRKN-209ENST00000612485 MOSPD1Q9UJG1 213 aa17.37■□□□□ 0.37
PRKN-209ENST00000612485 SATB2Q9UPW6 733 aa17.37■□□□□ 0.37
PRKN-209ENST00000612485 PPIL1Q9Y3C6 166 aa17.37■□□□□ 0.37
PRKN-209ENST00000612485 RAI2Q9Y5P3 530 aa17.37■□□□□ 0.37
PRKN-209ENST00000612485 LRP4O75096 1905 aa17.37■□□□□ 0.37
PRKN-209ENST00000612485 NPIPB15A6NHN6 443 aaPredicted RBP17.36■□□□□ 0.37
PRKN-209ENST00000612485 NTN3O00634 580 aaPredicted RBP17.36■□□□□ 0.37
PRKN-209ENST00000612485 MATN3O15232 486 aa17.36■□□□□ 0.37
PRKN-209ENST00000612485 AKR1B10O60218 316 aa17.36■□□□□ 0.37
PRKN-209ENST00000612485 TMEM253P0C7T8 217 aa17.36■□□□□ 0.37
PRKN-209ENST00000612485 MX2P20592 715 aa17.36■□□□□ 0.37
PRKN-209ENST00000612485 LHCGRP22888 699 aa17.36■□□□□ 0.37
PRKN-209ENST00000612485 CCNCP24863 283 aa17.36■□□□□ 0.37
PRKN-209ENST00000612485 RBMS1P29558 406 aaKnown RBP17.36■□□□□ 0.37
PRKN-209ENST00000612485 ETV3P41162 512 aa17.36■□□□□ 0.37
PRKN-209ENST00000612485 TAS2R40P59535 323 aa17.36■□□□□ 0.37
PRKN-209ENST00000612485 CCDC173Q0VFZ6 552 aa17.36■□□□□ 0.37
PRKN-209ENST00000612485 ASTE1Q2TB18 679 aaPredicted RBP17.36■□□□□ 0.37
PRKN-209ENST00000612485 ZFYVE27Q5T4F4 411 aa17.36■□□□□ 0.37
PRKN-209ENST00000612485 KCTD16Q68DU8 428 aa17.36■□□□□ 0.37
PRKN-209ENST00000612485 CPNE8Q86YQ8 564 aa17.36■□□□□ 0.37
PRKN-209ENST00000612485 PELI3Q8N2H9 469 aa17.36■□□□□ 0.37
PRKN-209ENST00000612485 CBARPQ8N350 705 aaPredicted RBP17.36■□□□□ 0.37
PRKN-209ENST00000612485 FAM46DQ8NEK8 389 aa17.36■□□□□ 0.37
PRKN-209ENST00000612485 GPR156Q8NFN8 814 aa17.36■□□□□ 0.37
PRKN-209ENST00000612485 PIH1D2Q8WWB5 315 aa17.36■□□□□ 0.37
PRKN-209ENST00000612485 FAF2Q96CS3 445 aa17.36■□□□□ 0.37
PRKN-209ENST00000612485 CRELD1Q96HD1 420 aa17.36■□□□□ 0.37
PRKN-209ENST00000612485 TSGA13Q96PP4 275 aa17.36■□□□□ 0.37
PRKN-209ENST00000612485 LGR4Q9BXB1 951 aa17.36■□□□□ 0.37
PRKN-209ENST00000612485 PACSIN1Q9BY11 444 aa17.36■□□□□ 0.37
PRKN-209ENST00000612485 PCDHGA8Q9Y5G5 932 aa17.36■□□□□ 0.37
PRKN-209ENST00000612485 SHROOM3Q8TF72 1996 aa17.35■□□□□ 0.37
PRKN-209ENST00000612485 RP1P56715 2156 aa17.35■□□□□ 0.37
PRKN-209ENST00000612485 PRSS38A1L453 326 aa17.35■□□□□ 0.37
PRKN-209ENST00000612485 FZD6O60353 706 aa17.35■□□□□ 0.37
PRKN-209ENST00000612485 CTPS1P17812 591 aa17.35■□□□□ 0.37
PRKN-209ENST00000612485 CA4P22748 312 aa17.35■□□□□ 0.37
PRKN-209ENST00000612485 TEAD1P28347 426 aa17.35■□□□□ 0.37
PRKN-209ENST00000612485 SOWAHCQ53LP3 525 aaPredicted RBP17.35■□□□□ 0.37
PRKN-209ENST00000612485 ALG1LQ6GMV1 187 aa17.35■□□□□ 0.37
PRKN-209ENST00000612485 RAET1GQ6H3X3 334 aa17.35■□□□□ 0.37
PRKN-209ENST00000612485 OGFOD3Q6PK18 319 aa17.35■□□□□ 0.37
PRKN-209ENST00000612485 HSD11B1LQ7Z5J1 315 aa17.35■□□□□ 0.37
PRKN-209ENST00000612485 HEATR4Q86WZ0 1026 aa17.35■□□□□ 0.37
PRKN-209ENST00000612485 WDR36Q8NI36 951 aaKnown RBP17.35■□□□□ 0.37
PRKN-209ENST00000612485 HIC2Q96JB3 615 aa17.35■□□□□ 0.37
PRKN-209ENST00000612485 GFM1Q96RP9 751 aaKnown RBP17.35■□□□□ 0.37
PRKN-209ENST00000612485 TEX101Q9BY14 249 aa17.35■□□□□ 0.37
PRKN-209ENST00000612485 TMEM168Q9H0V1 697 aa17.35■□□□□ 0.37
PRKN-209ENST00000612485 PRORYQ9H606 182 aa17.35■□□□□ 0.37
PRKN-209ENST00000612485 ASCL3Q9NQ33 180 aa17.35■□□□□ 0.37
PRKN-209ENST00000612485 RBM22Q9NW64 420 aaKnown RBP eCLIP17.35■□□□□ 0.37
PRKN-209ENST00000612485 GOLGA6CA6NDK9 693 aa17.34■□□□□ 0.37
PRKN-209ENST00000612485 GOLGA6BA6NDN3 693 aa17.34■□□□□ 0.37
PRKN-209ENST00000612485 TMX2-CTNND1H3BSU7 103 aa17.34■□□□□ 0.37
PRKN-209ENST00000612485 MAP3K6O95382 1288 aa17.34■□□□□ 0.37
PRKN-209ENST00000612485 GOLGA6DP0CG33 693 aa17.34■□□□□ 0.37
PRKN-209ENST00000612485 GLB1P16278 677 aa17.34■□□□□ 0.37
PRKN-209ENST00000612485 EPHB1P54762 984 aa17.34■□□□□ 0.37
PRKN-209ENST00000612485 CDK3Q00526 305 aa17.34■□□□□ 0.37
PRKN-209ENST00000612485 DPTQ07507 201 aa17.34■□□□□ 0.37
PRKN-209ENST00000612485 Q6ZVL8 140 aa17.34■□□□□ 0.37
PRKN-209ENST00000612485 TSPAN33Q86UF1 283 aa17.34■□□□□ 0.37
PRKN-209ENST00000612485 VSTM4Q8IW00 320 aa17.34■□□□□ 0.37
PRKN-209ENST00000612485 SPACA3Q8IXA5 215 aa17.34■□□□□ 0.37
PRKN-209ENST00000612485 COL27A1Q8IZC6 1860 aaPredicted RBP17.34■□□□□ 0.37
PRKN-209ENST00000612485 ZNF830Q96NB3 372 aaPredicted RBP17.34■□□□□ 0.37
PRKN-209ENST00000612485 TSPY26PQ9H489 355 aa17.34■□□□□ 0.37
PRKN-209ENST00000612485 DPEP2Q9H4A9 486 aa17.34■□□□□ 0.37
PRKN-209ENST00000612485 CARS2Q9HA77 564 aaKnown RBP17.34■□□□□ 0.37
PRKN-209ENST00000612485 ABHD10Q9NUJ1 306 aa17.34■□□□□ 0.37
PRKN-209ENST00000612485 GOLGA6AQ9NYA3 693 aa17.34■□□□□ 0.37
PRKN-209ENST00000612485 RABGEF1Q9UJ41 708 aa17.34■□□□□ 0.37
PRKN-209ENST00000612485 APPL1Q9UKG1 709 aa17.34■□□□□ 0.37
PRKN-209ENST00000612485 DNPEPQ9ULA0 475 aa17.34■□□□□ 0.37
PRKN-209ENST00000612485 TTLL3Q9Y4R7 772 aa17.34■□□□□ 0.37
PRKN-209ENST00000612485 LOC400499M0QZD8 3231 aa17.34■□□□□ 0.37
PRKN-209ENST00000612485 CCDC187A0A096LP49 1063 aa17.33■□□□□ 0.36
PRKN-209ENST00000612485 A0A0J9YYE9 177 aa17.33■□□□□ 0.36
PRKN-209ENST00000612485 B4DGG1 531 aa17.33■□□□□ 0.36
PRKN-209ENST00000612485 TRBC1P01850 177 aa17.33■□□□□ 0.36
PRKN-209ENST00000612485 RPLP0P05388 317 aaKnown RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms