RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 ZNF605Q86T29 641 aa17.8■□□□□ 0.44
SSBP1-215ENST00000612337 Q8N9G6 341 aaPredicted RBP17.8■□□□□ 0.44
SSBP1-215ENST00000612337 NUS1Q96E22 293 aa17.8■□□□□ 0.44
SSBP1-215ENST00000612337 NAP1L5Q96NT1 182 aaPredicted RBP17.8■□□□□ 0.44
SSBP1-215ENST00000612337 NUDCD1Q96RS6 583 aa17.8■□□□□ 0.44
SSBP1-215ENST00000612337 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.8■□□□□ 0.44
SSBP1-215ENST00000612337 PCDHGC4Q9Y5F7 938 aa17.8■□□□□ 0.44
SSBP1-215ENST00000612337 TENM4Q6N022 2769 aa17.8■□□□□ 0.44
SSBP1-215ENST00000612337 SCN8AQ9UQD0 1980 aa17.79■□□□□ 0.44
SSBP1-215ENST00000612337 PRSS38A1L453 326 aa17.79■□□□□ 0.44
SSBP1-215ENST00000612337 NUDT21O43809 227 aaKnown RBP17.79■□□□□ 0.44
SSBP1-215ENST00000612337 HEXIM1O94992 359 aaKnown RBP17.79■□□□□ 0.44
SSBP1-215ENST00000612337 MYCLP1P12525 358 aaPredicted RBP17.79■□□□□ 0.44
SSBP1-215ENST00000612337 SKILP12757 684 aa17.79■□□□□ 0.44
SSBP1-215ENST00000612337 PLA2G2AP14555 144 aa17.79■□□□□ 0.44
SSBP1-215ENST00000612337 TCF4P15884 667 aa17.79■□□□□ 0.44
SSBP1-215ENST00000612337 NFKBIAP25963 317 aa17.79■□□□□ 0.44
SSBP1-215ENST00000612337 SLC5A2P31639 672 aa17.79■□□□□ 0.44
SSBP1-215ENST00000612337 VIPR1P32241 457 aa17.79■□□□□ 0.44
SSBP1-215ENST00000612337 RALGPS1Q5JS13 557 aa17.79■□□□□ 0.44
SSBP1-215ENST00000612337 SPECC1LQ69YQ0 1117 aa17.79■□□□□ 0.44
SSBP1-215ENST00000612337 CCDC81Q6ZN84 652 aa17.79■□□□□ 0.44
SSBP1-215ENST00000612337 SPRED1Q7Z699 444 aa17.79■□□□□ 0.44
SSBP1-215ENST00000612337 SFTPA2Q8IWL1 248 aa17.79■□□□□ 0.44
SSBP1-215ENST00000612337 CBARPQ8N350 705 aaPredicted RBP17.79■□□□□ 0.44
SSBP1-215ENST00000612337 BBS5Q8N3I7 341 aa17.79■□□□□ 0.44
SSBP1-215ENST00000612337 PGBD5Q8N414 524 aa17.79■□□□□ 0.44
SSBP1-215ENST00000612337 CCL4L1Q8NHW4 92 aa17.79■□□□□ 0.44
SSBP1-215ENST00000612337 PDCD6IPQ8WUM4 868 aaKnown RBP17.79■□□□□ 0.44
SSBP1-215ENST00000612337 HSPH1Q92598 858 aa17.79■□□□□ 0.44
SSBP1-215ENST00000612337 CSPG4P5Q96PW8 444 aa17.79■□□□□ 0.44
SSBP1-215ENST00000612337 MGME1Q9BQP7 344 aa17.79■□□□□ 0.44
SSBP1-215ENST00000612337 DPEP2Q9H4A9 486 aa17.79■□□□□ 0.44
SSBP1-215ENST00000612337 NOD2Q9HC29 1040 aa17.79■□□□□ 0.44
SSBP1-215ENST00000612337 PHPT1Q9NRX4 125 aaPredicted RBP17.79■□□□□ 0.44
SSBP1-215ENST00000612337 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.79■□□□□ 0.44
SSBP1-215ENST00000612337 LRIT1Q9P2V4 623 aa17.79■□□□□ 0.44
SSBP1-215ENST00000612337 MOSPD1Q9UJG1 213 aa17.79■□□□□ 0.44
SSBP1-215ENST00000612337 ACSL6Q9UKU0 697 aa17.79■□□□□ 0.44
SSBP1-215ENST00000612337 PHTF1Q9UMS5 762 aa17.79■□□□□ 0.44
SSBP1-215ENST00000612337 RNF215Q9Y6U7 377 aa17.79■□□□□ 0.44
SSBP1-215ENST00000612337 BOD1L1Q8NFC6 3051 aa17.79■□□□□ 0.44
SSBP1-215ENST00000612337 BSNQ9UPA5 3926 aa17.79■□□□□ 0.44
SSBP1-215ENST00000612337 B4DGG1 531 aa17.78■□□□□ 0.44
SSBP1-215ENST00000612337 MAFKO60675 156 aa17.78■□□□□ 0.44
SSBP1-215ENST00000612337 CPP00450 1065 aa17.78■□□□□ 0.44
SSBP1-215ENST00000612337 CYP2A6P11509 494 aaPredicted RBP17.78■□□□□ 0.44
SSBP1-215ENST00000612337 HGFP14210 728 aa17.78■□□□□ 0.44
SSBP1-215ENST00000612337 ZFP36L1Q07352 338 aaKnown RBP17.78■□□□□ 0.44
SSBP1-215ENST00000612337 ARHGEF7Q14155 803 aa17.78■□□□□ 0.44
SSBP1-215ENST00000612337 PIGHQ14442 188 aaPredicted RBP17.78■□□□□ 0.44
SSBP1-215ENST00000612337 ZSCAN23Q3MJ62 389 aa17.78■□□□□ 0.44
SSBP1-215ENST00000612337 FIGNQ5HY92 759 aa17.78■□□□□ 0.44
SSBP1-215ENST00000612337 JAMLQ86YT9 394 aa17.78■□□□□ 0.44
SSBP1-215ENST00000612337 ATPAF2Q8N5M1 289 aa17.78■□□□□ 0.44
SSBP1-215ENST00000612337 KIAA1524Q8TCG1 905 aa17.78■□□□□ 0.44
SSBP1-215ENST00000612337 GPBAR1Q8TDU6 330 aa17.78■□□□□ 0.44
SSBP1-215ENST00000612337 TMEM159Q96B96 161 aa17.78■□□□□ 0.44
SSBP1-215ENST00000612337 DTD2Q96FN9 168 aa17.78■□□□□ 0.44
SSBP1-215ENST00000612337 CCNL2Q96S94 520 aaPredicted RBP17.78■□□□□ 0.44
SSBP1-215ENST00000612337 TEX101Q9BY14 249 aa17.78■□□□□ 0.44
SSBP1-215ENST00000612337 ATXN7L1Q9ULK2 861 aaPredicted RBP17.78■□□□□ 0.44
SSBP1-215ENST00000612337 LOXL2Q9Y4K0 774 aa17.78■□□□□ 0.44
SSBP1-215ENST00000612337 PSMD11O00231 422 aa17.77■□□□□ 0.44
SSBP1-215ENST00000612337 NVLO15381 856 aaKnown RBP17.77■□□□□ 0.44
SSBP1-215ENST00000612337 JMJD7P0C870 316 aa17.77■□□□□ 0.44
SSBP1-215ENST00000612337 RARAP10276 462 aa17.77■□□□□ 0.44
SSBP1-215ENST00000612337 CCNB1P14635 433 aa17.77■□□□□ 0.44
SSBP1-215ENST00000612337 SERPINB6P35237 376 aa17.77■□□□□ 0.44
SSBP1-215ENST00000612337 ETV3P41162 512 aa17.77■□□□□ 0.44
SSBP1-215ENST00000612337 CDH6P55285 790 aa17.77■□□□□ 0.44
SSBP1-215ENST00000612337 TRAF2Q12933 501 aa17.77■□□□□ 0.44
SSBP1-215ENST00000612337 NR1I3Q14994 352 aa17.77■□□□□ 0.44
SSBP1-215ENST00000612337 KIAA1614Q5VZ46 1190 aa17.77■□□□□ 0.44
SSBP1-215ENST00000612337 HEATR4Q86WZ0 1026 aa17.77■□□□□ 0.44
SSBP1-215ENST00000612337 C17orf82Q86X59 251 aaPredicted RBP17.77■□□□□ 0.44
SSBP1-215ENST00000612337 NIPA2Q8N8Q9 360 aa17.77■□□□□ 0.44
SSBP1-215ENST00000612337 NSMCE1Q8WV22 266 aa17.77■□□□□ 0.44
SSBP1-215ENST00000612337 TEKT4Q8WW24 435 aa17.77■□□□□ 0.44
SSBP1-215ENST00000612337 FRMD8Q9BZ67 464 aaPredicted RBP17.77■□□□□ 0.44
SSBP1-215ENST00000612337 SEMA4CQ9C0C4 833 aa17.77■□□□□ 0.44
SSBP1-215ENST00000612337 CARS2Q9HA77 564 aaKnown RBP17.77■□□□□ 0.44
SSBP1-215ENST00000612337 PISDQ9UG56 409 aa17.77■□□□□ 0.44
SSBP1-215ENST00000612337 PGLSO95336 258 aa17.76■□□□□ 0.43
SSBP1-215ENST00000612337 CEACAM5P06731 702 aa17.76■□□□□ 0.43
SSBP1-215ENST00000612337 LHCGRP22888 699 aa17.76■□□□□ 0.43
SSBP1-215ENST00000612337 TEAD1P28347 426 aa17.76■□□□□ 0.43
SSBP1-215ENST00000612337 MMP13P45452 471 aa17.76■□□□□ 0.43
SSBP1-215ENST00000612337 ZNF165P49910 485 aa17.76■□□□□ 0.43
SSBP1-215ENST00000612337 MAXP61244 160 aa17.76■□□□□ 0.43
SSBP1-215ENST00000612337 CDK3Q00526 305 aa17.76■□□□□ 0.43
SSBP1-215ENST00000612337 B4GALNT1Q00973 533 aa17.76■□□□□ 0.43
SSBP1-215ENST00000612337 ILF3Q12906 894 aaKnown RBP eCLIP17.76■□□□□ 0.43
SSBP1-215ENST00000612337 LY6DQ14210 128 aa17.76■□□□□ 0.43
SSBP1-215ENST00000612337 MARC1Q5VT66 337 aa17.76■□□□□ 0.43
SSBP1-215ENST00000612337 HGSNATQ68CP4 663 aa17.76■□□□□ 0.43
SSBP1-215ENST00000612337 DENND2CQ68D51 928 aa17.76■□□□□ 0.43
SSBP1-215ENST00000612337 TXNRD3NBQ6F5E7 133 aa17.76■□□□□ 0.43
SSBP1-215ENST00000612337 HSD11B1LQ7Z5J1 315 aa17.76■□□□□ 0.43
SSBP1-215ENST00000612337 NRROSQ86YC3 692 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms