RNA–Protein interactions for RNA: ENST00000612195.4

TVP23A-210, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TVP23A, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-210ENST00000612195 SYT11Q9BT88 431 aa16.76■□□□□ 0.27
TVP23A-210ENST00000612195 CARS2Q9HA77 564 aaKnown RBP16.76■□□□□ 0.27
TVP23A-210ENST00000612195 LMBRD1Q9NUN5 540 aa16.76■□□□□ 0.27
TVP23A-210ENST00000612195 PCDHB11Q9Y5F2 797 aa16.76■□□□□ 0.27
TVP23A-210ENST00000612195 PCDHGA4Q9Y5G9 962 aa16.76■□□□□ 0.27
TVP23A-210ENST00000612195 LRRC10BA6NIK2 292 aa16.75■□□□□ 0.27
TVP23A-210ENST00000612195 CPNE6O95741 557 aa16.75■□□□□ 0.27
TVP23A-210ENST00000612195 FUCA1P04066 466 aa16.75■□□□□ 0.27
TVP23A-210ENST00000612195 FGF1P05230 155 aa16.75■□□□□ 0.27
TVP23A-210ENST00000612195 CEACAM5P06731 702 aa16.75■□□□□ 0.27
TVP23A-210ENST00000612195 CCDC172P0C7W6 258 aa16.75■□□□□ 0.27
TVP23A-210ENST00000612195 MYCLP1P12525 358 aaPredicted RBP16.75■□□□□ 0.27
TVP23A-210ENST00000612195 CCNB1P14635 433 aa16.75■□□□□ 0.27
TVP23A-210ENST00000612195 WT1P19544 449 aaPredicted RBP16.75■□□□□ 0.27
TVP23A-210ENST00000612195 CDK11BP21127 795 aaKnown RBP16.75■□□□□ 0.27
TVP23A-210ENST00000612195 ALDH4A1P30038 563 aa16.75■□□□□ 0.27
TVP23A-210ENST00000612195 MIPP30301 263 aa16.75■□□□□ 0.27
TVP23A-210ENST00000612195 MAZP56270 477 aaKnown RBP16.75■□□□□ 0.27
TVP23A-210ENST00000612195 LBRQ14739 615 aaKnown RBP16.75■□□□□ 0.27
TVP23A-210ENST00000612195 CNGA3Q16281 694 aa16.75■□□□□ 0.27
TVP23A-210ENST00000612195 TSR1Q2NL82 804 aaKnown RBP16.75■□□□□ 0.27
TVP23A-210ENST00000612195 PLEKHA7Q6IQ23 1121 aa16.75■□□□□ 0.27
TVP23A-210ENST00000612195 XKR5Q6UX68 686 aa16.75■□□□□ 0.27
TVP23A-210ENST00000612195 RBM43Q6ZSC3 357 aaKnown RBP16.75■□□□□ 0.27
TVP23A-210ENST00000612195 CYP4V2Q6ZWL3 525 aaPredicted RBP16.75■□□□□ 0.27
TVP23A-210ENST00000612195 APTXQ7Z2E3 356 aaKnown RBP16.75■□□□□ 0.27
TVP23A-210ENST00000612195 PIM3Q86V86 326 aa16.75■□□□□ 0.27
TVP23A-210ENST00000612195 C17orf82Q86X59 251 aaPredicted RBP16.75■□□□□ 0.27
TVP23A-210ENST00000612195 DTX1Q86Y01 620 aa16.75■□□□□ 0.27
TVP23A-210ENST00000612195 NRROSQ86YC3 692 aa16.75■□□□□ 0.27
TVP23A-210ENST00000612195 KIAA1524Q8TCG1 905 aa16.75■□□□□ 0.27
TVP23A-210ENST00000612195 GPBAR1Q8TDU6 330 aa16.75■□□□□ 0.27
TVP23A-210ENST00000612195 ZDHHC1Q8WTX9 485 aa16.75■□□□□ 0.27
TVP23A-210ENST00000612195 NUS1Q96E22 293 aa16.75■□□□□ 0.27
TVP23A-210ENST00000612195 TRIM7Q9C029 511 aa16.75■□□□□ 0.27
TVP23A-210ENST00000612195 CWC15Q9P013 229 aaKnown RBP16.75■□□□□ 0.27
TVP23A-210ENST00000612195 SEPT3Q9UH03 358 aa16.75■□□□□ 0.27
TVP23A-210ENST00000612195 PCDHGC4Q9Y5F7 938 aa16.75■□□□□ 0.27
TVP23A-210ENST00000612195 HEMK1Q9Y5R4 338 aaPredicted RBP16.75■□□□□ 0.27
TVP23A-210ENST00000612195 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.74■□□□□ 0.27
TVP23A-210ENST00000612195 A0A1W2PQC6 194 aa16.74■□□□□ 0.27
TVP23A-210ENST00000612195 TMEM191CA6NGB0 347 aa16.74■□□□□ 0.27
TVP23A-210ENST00000612195 CYSRT1A8MQ03 144 aa16.74■□□□□ 0.27
TVP23A-210ENST00000612195 PRPSAP2O60256 369 aa16.74■□□□□ 0.27
TVP23A-210ENST00000612195 FAM87AP0C7U9 286 aa16.74■□□□□ 0.27
TVP23A-210ENST00000612195 ITGB6P18564 788 aa16.74■□□□□ 0.27
TVP23A-210ENST00000612195 RENBPP51606 427 aa16.74■□□□□ 0.27
TVP23A-210ENST00000612195 CYP4F2P78329 520 aa16.74■□□□□ 0.27
TVP23A-210ENST00000612195 NFKB2Q00653 900 aa16.74■□□□□ 0.27
TVP23A-210ENST00000612195 MYL5Q02045 173 aa16.74■□□□□ 0.27
TVP23A-210ENST00000612195 DPYSQ14117 519 aa16.74■□□□□ 0.27
TVP23A-210ENST00000612195 DENND2CQ68D51 928 aa16.74■□□□□ 0.27
TVP23A-210ENST00000612195 ZNF574Q6ZN55 896 aaPredicted RBP16.74■□□□□ 0.27
TVP23A-210ENST00000612195 HEATR4Q86WZ0 1026 aa16.74■□□□□ 0.27
TVP23A-210ENST00000612195 PDCD6IPQ8WUM4 868 aaKnown RBP16.74■□□□□ 0.27
TVP23A-210ENST00000612195 PTCD2Q8WV60 388 aaKnown RBP16.74■□□□□ 0.27
TVP23A-210ENST00000612195 SPOCK2Q92563 424 aa16.74■□□□□ 0.27
TVP23A-210ENST00000612195 TEX101Q9BY14 249 aa16.74■□□□□ 0.27
TVP23A-210ENST00000612195 PHPT1Q9NRX4 125 aaPredicted RBP16.74■□□□□ 0.27
TVP23A-210ENST00000612195 STARD5Q9NSY2 213 aa16.74■□□□□ 0.27
TVP23A-210ENST00000612195 TAAR2Q9P1P5 351 aa16.74■□□□□ 0.27
TVP23A-210ENST00000612195 SDK2Q58EX2 2172 aa16.73■□□□□ 0.27
TVP23A-210ENST00000612195 RHPN2P1A8MT19 583 aa16.73■□□□□ 0.27
TVP23A-210ENST00000612195 HTRA2O43464 458 aaPredicted RBP16.73■□□□□ 0.27
TVP23A-210ENST00000612195 RNF8O76064 485 aa16.73■□□□□ 0.27
TVP23A-210ENST00000612195 HEXIM1O94992 359 aaKnown RBP16.73■□□□□ 0.27
TVP23A-210ENST00000612195 ECEL1O95672 775 aa16.73■□□□□ 0.27
TVP23A-210ENST00000612195 CCL4P13236 92 aa16.73■□□□□ 0.27
TVP23A-210ENST00000612195 AK4P27144 223 aaPredicted RBP16.73■□□□□ 0.27
TVP23A-210ENST00000612195 ETV3P41162 512 aa16.73■□□□□ 0.27
TVP23A-210ENST00000612195 GNPDA1P46926 289 aa16.73■□□□□ 0.27
TVP23A-210ENST00000612195 POLD2P49005 469 aa16.73■□□□□ 0.27
TVP23A-210ENST00000612195 HCAR3P49019 387 aa16.73■□□□□ 0.27
TVP23A-210ENST00000612195 ILF3Q12906 894 aaKnown RBP eCLIP16.73■□□□□ 0.27
TVP23A-210ENST00000612195 TBR1Q16650 682 aa16.73■□□□□ 0.27
TVP23A-210ENST00000612195 TMCO4Q5TGY1 634 aa16.73■□□□□ 0.27
TVP23A-210ENST00000612195 TMEM164Q5U3C3 297 aa16.73■□□□□ 0.27
TVP23A-210ENST00000612195 PPP1R2P3Q6NXS1 205 aa16.73■□□□□ 0.27
TVP23A-210ENST00000612195 SLC30A9Q6PML9 568 aa16.73■□□□□ 0.27
TVP23A-210ENST00000612195 ZNF438Q7Z4V0 828 aa16.73■□□□□ 0.27
TVP23A-210ENST00000612195 HSD11B1LQ7Z5J1 315 aa16.73■□□□□ 0.27
TVP23A-210ENST00000612195 CBARPQ8N350 705 aaPredicted RBP16.73■□□□□ 0.27
TVP23A-210ENST00000612195 ZSCAN1Q8NBB4 408 aa16.73■□□□□ 0.27
TVP23A-210ENST00000612195 RCBTB1Q8NDN9 531 aa16.73■□□□□ 0.27
TVP23A-210ENST00000612195 JPH3Q8WXH2 748 aaPredicted RBP16.73■□□□□ 0.27
TVP23A-210ENST00000612195 ZNF599Q96NL3 588 aa16.73■□□□□ 0.27
TVP23A-210ENST00000612195 NUDT22Q9BRQ3 303 aa16.73■□□□□ 0.27
TVP23A-210ENST00000612195 GSDMCQ9BYG8 508 aa16.73■□□□□ 0.27
TVP23A-210ENST00000612195 FRMD8Q9BZ67 464 aaPredicted RBP16.73■□□□□ 0.27
TVP23A-210ENST00000612195 TRIM4Q9C037 500 aa16.73■□□□□ 0.27
TVP23A-210ENST00000612195 HSD3B7Q9H2F3 369 aa16.73■□□□□ 0.27
TVP23A-210ENST00000612195 TRNAU1APQ9NX07 287 aaKnown RBP16.73■□□□□ 0.27
TVP23A-210ENST00000612195 AKAP7Q9P0M2 348 aaPredicted RBP16.73■□□□□ 0.27
TVP23A-210ENST00000612195 ST14Q9Y5Y6 855 aa16.73■□□□□ 0.27
TVP23A-210ENST00000612195 PTPN13Q12923 2485 aa16.72■□□□□ 0.27
TVP23A-210ENST00000612195 IGHV5-10-1A0A0J9YXX1 117 aa16.72■□□□□ 0.27
TVP23A-210ENST00000612195 SOCS5O75159 536 aa16.72■□□□□ 0.27
TVP23A-210ENST00000612195 LRCH4O75427 683 aa16.72■□□□□ 0.27
TVP23A-210ENST00000612195 PEX11BO96011 259 aa16.72■□□□□ 0.27
TVP23A-210ENST00000612195 CR2P20023 1033 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms