RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 TMEM26Q6ZUK4 368 aa16.02■□□□□ 0.15
RTN1-209ENST00000611068 TOP1MTQ969P6 601 aa16.02■□□□□ 0.15
RTN1-209ENST00000611068 RMND5BQ96G75 393 aaPredicted RBP16.02■□□□□ 0.15
RTN1-209ENST00000611068 IGSF21Q96ID5 467 aa16.02■□□□□ 0.15
RTN1-209ENST00000611068 ALPK1Q96QP1 1244 aa16.02■□□□□ 0.15
RTN1-209ENST00000611068 WDR83Q9BRX9 315 aaKnown RBP16.02■□□□□ 0.15
RTN1-209ENST00000611068 SEZ6LQ9BYH1 1024 aa16.02■□□□□ 0.15
RTN1-209ENST00000611068 CCSER2Q9H7U1 834 aa16.02■□□□□ 0.15
RTN1-209ENST00000611068 NDFIP2Q9NV92 336 aa16.02■□□□□ 0.15
RTN1-209ENST00000611068 FNDC1Q4ZHG4 1894 aaPredicted RBP16.02■□□□□ 0.15
RTN1-209ENST00000611068 PTPRDP23468 1912 aa16.01■□□□□ 0.15
RTN1-209ENST00000611068 MT-ND3P03897 115 aa16.01■□□□□ 0.15
RTN1-209ENST00000611068 YWHAQP27348 245 aa16.01■□□□□ 0.15
RTN1-209ENST00000611068 TUBA4AP68366 448 aa16.01■□□□□ 0.15
RTN1-209ENST00000611068 GPR17Q13304 367 aa16.01■□□□□ 0.15
RTN1-209ENST00000611068 ARHGAP36Q6ZRI8 547 aa16.01■□□□□ 0.15
RTN1-209ENST00000611068 FRMD7Q6ZUT3 714 aa16.01■□□□□ 0.15
RTN1-209ENST00000611068 FIBCD1Q8N539 461 aa16.01■□□□□ 0.15
RTN1-209ENST00000611068 TRUB1Q8WWH5 349 aaKnown RBP16.01■□□□□ 0.15
RTN1-209ENST00000611068 P2RY11Q96G91 374 aa16.01■□□□□ 0.15
RTN1-209ENST00000611068 FCRL2Q96LA5 508 aaPredicted RBP16.01■□□□□ 0.15
RTN1-209ENST00000611068 PSD2Q9BQI7 771 aa16.01■□□□□ 0.15
RTN1-209ENST00000611068 MARCH7Q9H992 704 aa16.01■□□□□ 0.15
RTN1-209ENST00000611068 TBC1D14Q9P2M4 693 aa16.01■□□□□ 0.15
RTN1-209ENST00000611068 UNC80Q8N2C7 3258 aa16.01■□□□□ 0.15
RTN1-209ENST00000611068 DFFAO00273 331 aa16.01■□□□□ 0.15
RTN1-209ENST00000611068 IRAK2O43187 625 aa16.01■□□□□ 0.15
RTN1-209ENST00000611068 GMNNO75496 209 aa16.01■□□□□ 0.15
RTN1-209ENST00000611068 ABCB1P08183 1280 aaPredicted RBP16.01■□□□□ 0.15
RTN1-209ENST00000611068 ATF6P18850 670 aa16.01■□□□□ 0.15
RTN1-209ENST00000611068 EN2P19622 333 aaPredicted RBP16.01■□□□□ 0.15
RTN1-209ENST00000611068 BMPR1AP36894 532 aa16.01■□□□□ 0.15
RTN1-209ENST00000611068 MLLT10P55197 1068 aa16.01■□□□□ 0.15
RTN1-209ENST00000611068 C1QTNF8P60827 252 aa16.01■□□□□ 0.15
RTN1-209ENST00000611068 PGS1Q32NB8 556 aa16.01■□□□□ 0.15
RTN1-209ENST00000611068 C10orf120Q5SQS8 335 aa16.01■□□□□ 0.15
RTN1-209ENST00000611068 TTC23LQ6PF05 361 aa16.01■□□□□ 0.15
RTN1-209ENST00000611068 C4orf22Q6V702 233 aa16.01■□□□□ 0.15
RTN1-209ENST00000611068 FBXO36Q8NEA4 188 aa16.01■□□□□ 0.15
RTN1-209ENST00000611068 HCAR2Q8TDS4 363 aa16.01■□□□□ 0.15
RTN1-209ENST00000611068 HTR3CQ8WXA8 447 aa16.01■□□□□ 0.15
RTN1-209ENST00000611068 APOPT1Q96IL0 206 aa16.01■□□□□ 0.15
RTN1-209ENST00000611068 C7orf26Q96N11 449 aa16.01■□□□□ 0.15
RTN1-209ENST00000611068 CXorf21Q9HAI6 301 aa16.01■□□□□ 0.15
RTN1-209ENST00000611068 RIC8BQ9NVN3 520 aa16.01■□□□□ 0.15
RTN1-209ENST00000611068 HACD3Q9P035 362 aa16.01■□□□□ 0.15
RTN1-209ENST00000611068 OR6C75A6NL08 312 aa16■□□□□ 0.15
RTN1-209ENST00000611068 KPNA4O00629 521 aaPredicted RBP16■□□□□ 0.15
RTN1-209ENST00000611068 DCLK1O15075 740 aa16■□□□□ 0.15
RTN1-209ENST00000611068 BMP10O95393 424 aa16■□□□□ 0.15
RTN1-209ENST00000611068 SEC24AO95486 1093 aa16■□□□□ 0.15
RTN1-209ENST00000611068 F9P00740 461 aa16■□□□□ 0.15
RTN1-209ENST00000611068 TIMP1P01033 207 aa16■□□□□ 0.15
RTN1-209ENST00000611068 WDR5P61964 334 aaKnown RBP16■□□□□ 0.15
RTN1-209ENST00000611068 CRADDP78560 199 aa16■□□□□ 0.15
RTN1-209ENST00000611068 TUBB3Q13509 450 aa16■□□□□ 0.15
RTN1-209ENST00000611068 CHI3L2Q15782 390 aa16■□□□□ 0.15
RTN1-209ENST00000611068 ANKS3Q6ZW76 656 aa16■□□□□ 0.15
RTN1-209ENST00000611068 UTS2BQ765I0 119 aa16■□□□□ 0.15
RTN1-209ENST00000611068 CYP2U1Q7Z449 544 aa16■□□□□ 0.15
RTN1-209ENST00000611068 TFAP2DQ7Z6R9 452 aa16■□□□□ 0.15
RTN1-209ENST00000611068 DSG4Q86SJ6 1040 aa16■□□□□ 0.15
RTN1-209ENST00000611068 ALKBH8Q96BT7 664 aaKnown RBP16■□□□□ 0.15
RTN1-209ENST00000611068 YME1L1Q96TA2 773 aa16■□□□□ 0.15
RTN1-209ENST00000611068 FRMD8P1Q9BZ68 369 aaPredicted RBP16■□□□□ 0.15
RTN1-209ENST00000611068 PNPLA8Q9NP80 782 aa16■□□□□ 0.15
RTN1-209ENST00000611068 MYO7AQ13402 2215 aa16■□□□□ 0.15
RTN1-209ENST00000611068 MICAL3Q7RTP6 2002 aa16■□□□□ 0.15
RTN1-209ENST00000611068 BCLAF3A2AJT9 711 aaKnown RBP16■□□□□ 0.15
RTN1-209ENST00000611068 RNF103O00237 685 aa16■□□□□ 0.15
RTN1-209ENST00000611068 CDK2AP1O14519 115 aa16■□□□□ 0.15
RTN1-209ENST00000611068 ICMTO60725 284 aa16■□□□□ 0.15
RTN1-209ENST00000611068 CXCR2P25025 360 aa16■□□□□ 0.15
RTN1-209ENST00000611068 TRAF2Q12933 501 aa16■□□□□ 0.15
RTN1-209ENST00000611068 LDLRAP1Q5SW96 308 aa16■□□□□ 0.15
RTN1-209ENST00000611068 MON1AQ86VX9 555 aa16■□□□□ 0.15
RTN1-209ENST00000611068 CARM1Q86X55 608 aa16■□□□□ 0.15
RTN1-209ENST00000611068 CDKL3Q8IVW4 592 aaPredicted RBP16■□□□□ 0.15
RTN1-209ENST00000611068 CLSTN3Q9BQT9 956 aa16■□□□□ 0.15
RTN1-209ENST00000611068 DHRS4Q9BTZ2 278 aa16■□□□□ 0.15
RTN1-209ENST00000611068 UBP1Q9NZI7 540 aa16■□□□□ 0.15
RTN1-209ENST00000611068 DNMT3BQ9UBC3 853 aaKnown RBP16■□□□□ 0.15
RTN1-209ENST00000611068 BCAP29Q9UHQ4 241 aa16■□□□□ 0.15
RTN1-209ENST00000611068 VANGL2Q9ULK5 521 aa16■□□□□ 0.15
RTN1-209ENST00000611068 KLF11O14901 512 aa15.99■□□□□ 0.15
RTN1-209ENST00000611068 C8BP07358 591 aa15.99■□□□□ 0.15
RTN1-209ENST00000611068 ZNF26P17031 533 aaPredicted RBP15.99■□□□□ 0.15
RTN1-209ENST00000611068 SYN1P17600 705 aa15.99■□□□□ 0.15
RTN1-209ENST00000611068 CCR1P32246 355 aa15.99■□□□□ 0.15
RTN1-209ENST00000611068 HSPA13P48723 471 aa15.99■□□□□ 0.15
RTN1-209ENST00000611068 ESRRGP62508 458 aa15.99■□□□□ 0.15
RTN1-209ENST00000611068 TXNL4AP83876 142 aaKnown RBP15.99■□□□□ 0.15
RTN1-209ENST00000611068 GALNT2Q10471 571 aa15.99■□□□□ 0.15
RTN1-209ENST00000611068 CARTPTQ16568 116 aa15.99■□□□□ 0.15
RTN1-209ENST00000611068 ZCCHC23Q6ZST2 131 aa15.99■□□□□ 0.15
RTN1-209ENST00000611068 CIR1Q86X95 450 aaPredicted RBP15.99■□□□□ 0.15
RTN1-209ENST00000611068 LRRC49Q8IUZ0 686 aa15.99■□□□□ 0.15
RTN1-209ENST00000611068 ZC3H7AQ8IWR0 971 aaKnown RBP15.99■□□□□ 0.15
RTN1-209ENST00000611068 CFAP36Q96G28 342 aa15.99■□□□□ 0.15
RTN1-209ENST00000611068 FUBP3Q96I24 572 aaKnown RBP eCLIP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms