RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	CHMP5	Q9NZZ3	219 aa		21.05	■□□□□ 0.96
NECAB3-222	ENST00000607805	B4GALT6	Q9UBX8	382 aa		21.05	■□□□□ 0.96
NECAB3-222	ENST00000607805	IL17B	Q9UHF5	180 aa		21.05	■□□□□ 0.96
NECAB3-222	ENST00000607805	LGALS16	A8MUM7	142 aa		21.04	■□□□□ 0.96
NECAB3-222	ENST00000607805	HTRA2	O43464	458 aa	Predicted RBP	21.04	■□□□□ 0.96
NECAB3-222	ENST00000607805	FGF1	P05230	155 aa		21.04	■□□□□ 0.96
NECAB3-222	ENST00000607805	CEACAM5	P06731	702 aa		21.04	■□□□□ 0.96
NECAB3-222	ENST00000607805	TPM2	P07951	284 aa		21.04	■□□□□ 0.96
NECAB3-222	ENST00000607805	MYCLP1	P12525	358 aa	Predicted RBP	21.04	■□□□□ 0.96
NECAB3-222	ENST00000607805	CR2	P20023	1033 aa		21.04	■□□□□ 0.96
NECAB3-222	ENST00000607805	AP1S1	P61966	158 aa		21.04	■□□□□ 0.96
NECAB3-222	ENST00000607805	TBR1	Q16650	682 aa		21.04	■□□□□ 0.96
NECAB3-222	ENST00000607805	CLPP	Q16740	277 aa	Predicted RBP	21.04	■□□□□ 0.96
NECAB3-222	ENST00000607805	ERMARD	Q5T6L9	678 aa		21.04	■□□□□ 0.96
NECAB3-222	ENST00000607805	PLEKHA7	Q6IQ23	1121 aa		21.04	■□□□□ 0.96
NECAB3-222	ENST00000607805	RBM43	Q6ZSC3	357 aa	Known RBP	21.04	■□□□□ 0.96
NECAB3-222	ENST00000607805	IRF2BP2	Q7Z5L9	587 aa		21.04	■□□□□ 0.96
NECAB3-222	ENST00000607805	TP53INP2	Q8IXH6	220 aa		21.04	■□□□□ 0.96
NECAB3-222	ENST00000607805	FRMD8	Q9BZ67	464 aa	Predicted RBP	21.04	■□□□□ 0.96
NECAB3-222	ENST00000607805	FAM117A	Q9C073	453 aa		21.04	■□□□□ 0.96
NECAB3-222	ENST00000607805	RDH14	Q9HBH5	336 aa		21.04	■□□□□ 0.96
NECAB3-222	ENST00000607805	USP9Y	O00507	2555 aa	Predicted RBP	21.03	■□□□□ 0.96
NECAB3-222	ENST00000607805	NBPF19	A0A087WUL8	3843 aa		21.03	■□□□□ 0.96
NECAB3-222	ENST00000607805		A8MX80	341 aa		21.03	■□□□□ 0.96
NECAB3-222	ENST00000607805	AGRP	O00253	132 aa		21.03	■□□□□ 0.96
NECAB3-222	ENST00000607805	PDE2A	O00408	941 aa	Predicted RBP	21.03	■□□□□ 0.96
NECAB3-222	ENST00000607805	ARHGAP6	O43182	974 aa		21.03	■□□□□ 0.96
NECAB3-222	ENST00000607805	SUV39H1	O43463	412 aa		21.03	■□□□□ 0.96
NECAB3-222	ENST00000607805	FAM87A	P0C7U9	286 aa		21.03	■□□□□ 0.96
NECAB3-222	ENST00000607805	HCAR3	P49019	387 aa		21.03	■□□□□ 0.96
NECAB3-222	ENST00000607805	SCNN1B	P51168	640 aa		21.03	■□□□□ 0.96
NECAB3-222	ENST00000607805	MAPK10	P53779	464 aa		21.03	■□□□□ 0.96
NECAB3-222	ENST00000607805	MAZ	P56270	477 aa	Known RBP	21.03	■□□□□ 0.96
NECAB3-222	ENST00000607805	OR1D5	P58170	312 aa		21.03	■□□□□ 0.96
NECAB3-222	ENST00000607805	CNGA3	Q16281	694 aa		21.03	■□□□□ 0.96
NECAB3-222	ENST00000607805	PHF19	Q5T6S3	580 aa		21.03	■□□□□ 0.96
NECAB3-222	ENST00000607805	PIM3	Q86V86	326 aa		21.03	■□□□□ 0.96
NECAB3-222	ENST00000607805	KIAA1524	Q8TCG1	905 aa		21.03	■□□□□ 0.96
NECAB3-222	ENST00000607805	FUCA2	Q9BTY2	467 aa		21.03	■□□□□ 0.96
NECAB3-222	ENST00000607805	WDR70	Q9NW82	654 aa		21.03	■□□□□ 0.96
NECAB3-222	ENST00000607805	TRNAU1AP	Q9NX07	287 aa	Known RBP	21.03	■□□□□ 0.96
NECAB3-222	ENST00000607805	USP9X	Q93008	2570 aa	Predicted RBP	21.03	■□□□□ 0.96
NECAB3-222	ENST00000607805	SPTAN1	Q13813	2472 aa	Known RBP	21.02	■□□□□ 0.96
NECAB3-222	ENST00000607805	HGS	O14964	777 aa	Predicted RBP	21.02	■□□□□ 0.96
NECAB3-222	ENST00000607805	PEX11B	O96011	259 aa		21.02	■□□□□ 0.96
NECAB3-222	ENST00000607805	CCL4	P13236	92 aa		21.02	■□□□□ 0.96
NECAB3-222	ENST00000607805	CD1C	P29017	333 aa		21.02	■□□□□ 0.96
NECAB3-222	ENST00000607805	NFKB2	Q00653	900 aa		21.02	■□□□□ 0.96
NECAB3-222	ENST00000607805	SLC10A7	Q0GE19	358 aa		21.02	■□□□□ 0.96
NECAB3-222	ENST00000607805	DPYS	Q14117	519 aa		21.02	■□□□□ 0.96
NECAB3-222	ENST00000607805	ACOX1	Q15067	660 aa		21.02	■□□□□ 0.96
NECAB3-222	ENST00000607805	ZDHHC1	Q8WTX9	485 aa		21.02	■□□□□ 0.96
NECAB3-222	ENST00000607805	PTCD2	Q8WV60	388 aa	Known RBP	21.02	■□□□□ 0.96
NECAB3-222	ENST00000607805	NUDT22	Q9BRQ3	303 aa		21.02	■□□□□ 0.96
NECAB3-222	ENST00000607805	HSD3B7	Q9H2F3	369 aa		21.02	■□□□□ 0.96
NECAB3-222	ENST00000607805	CARS2	Q9HA77	564 aa	Known RBP	21.02	■□□□□ 0.96
NECAB3-222	ENST00000607805	SP110	Q9HB58	689 aa		21.02	■□□□□ 0.96
NECAB3-222	ENST00000607805	KCTD5	Q9NXV2	234 aa		21.02	■□□□□ 0.96
NECAB3-222	ENST00000607805	TAAR2	Q9P1P5	351 aa		21.02	■□□□□ 0.96
NECAB3-222	ENST00000607805	SEPT3	Q9UH03	358 aa		21.02	■□□□□ 0.96
NECAB3-222	ENST00000607805	HEMK1	Q9Y5R4	338 aa	Predicted RBP	21.02	■□□□□ 0.96
NECAB3-222	ENST00000607805	RP1L1	Q8IWN7	2480 aa	Predicted RBP	21.02	■□□□□ 0.96
NECAB3-222	ENST00000607805	IGHV5-10-1	A0A0J9YXX1	117 aa		21.01	■□□□□ 0.95
NECAB3-222	ENST00000607805	TTC24	A2A3L6	582 aa	Predicted RBP	21.01	■□□□□ 0.95
NECAB3-222	ENST00000607805	TMEM191C	A6NGB0	347 aa		21.01	■□□□□ 0.95
NECAB3-222	ENST00000607805	DFFA	O00273	331 aa		21.01	■□□□□ 0.95
NECAB3-222	ENST00000607805	TEX33	O43247	280 aa		21.01	■□□□□ 0.95
NECAB3-222	ENST00000607805	HEXIM1	O94992	359 aa	Known RBP	21.01	■□□□□ 0.95
NECAB3-222	ENST00000607805	PSMA2	P25787	234 aa		21.01	■□□□□ 0.95
NECAB3-222	ENST00000607805	TEAD1	P28347	426 aa		21.01	■□□□□ 0.95
NECAB3-222	ENST00000607805	RENBP	P51606	427 aa		21.01	■□□□□ 0.95
NECAB3-222	ENST00000607805	CYP4F2	P78329	520 aa		21.01	■□□□□ 0.95
NECAB3-222	ENST00000607805	UBXN1	Q04323	297 aa		21.01	■□□□□ 0.95
NECAB3-222	ENST00000607805	SQSTM1	Q13501	440 aa		21.01	■□□□□ 0.95
NECAB3-222	ENST00000607805	LBR	Q14739	615 aa	Known RBP	21.01	■□□□□ 0.95
NECAB3-222	ENST00000607805	MAP9	Q49MG5	647 aa		21.01	■□□□□ 0.95
NECAB3-222	ENST00000607805	HEATR4	Q86WZ0	1026 aa		21.01	■□□□□ 0.95
NECAB3-222	ENST00000607805	PSTK	Q8IV42	348 aa	Known RBP	21.01	■□□□□ 0.95
NECAB3-222	ENST00000607805	NAGS	Q8N159	534 aa		21.01	■□□□□ 0.95
NECAB3-222	ENST00000607805	PMEPA1	Q969W9	287 aa		21.01	■□□□□ 0.95
NECAB3-222	ENST00000607805	NUS1	Q96E22	293 aa		21.01	■□□□□ 0.95
NECAB3-222	ENST00000607805	ZNF599	Q96NL3	588 aa		21.01	■□□□□ 0.95
NECAB3-222	ENST00000607805	ARHGAP9	Q9BRR9	750 aa		21.01	■□□□□ 0.95
NECAB3-222	ENST00000607805	SLC12A9	Q9BXP2	914 aa		21.01	■□□□□ 0.95
NECAB3-222	ENST00000607805	GSDMC	Q9BYG8	508 aa		21.01	■□□□□ 0.95
NECAB3-222	ENST00000607805	TRIM7	Q9C029	511 aa		21.01	■□□□□ 0.95
NECAB3-222	ENST00000607805	TRIM4	Q9C037	500 aa		21.01	■□□□□ 0.95
NECAB3-222	ENST00000607805	PHPT1	Q9NRX4	125 aa	Predicted RBP	21.01	■□□□□ 0.95
NECAB3-222	ENST00000607805	PARVA	Q9NVD7	372 aa		21.01	■□□□□ 0.95
NECAB3-222	ENST00000607805	CWC15	Q9P013	229 aa	Known RBP	21.01	■□□□□ 0.95
NECAB3-222	ENST00000607805	PCSK1N	Q9UHG2	260 aa		21.01	■□□□□ 0.95
NECAB3-222	ENST00000607805	MOSPD1	Q9UJG1	213 aa		21.01	■□□□□ 0.95
NECAB3-222	ENST00000607805	PCDHGA3	Q9Y5H0	932 aa		21.01	■□□□□ 0.95
NECAB3-222	ENST00000607805	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	21	■□□□□ 0.95
NECAB3-222	ENST00000607805	SOCS5	O75159	536 aa		21	■□□□□ 0.95
NECAB3-222	ENST00000607805	ECEL1	O95672	775 aa		21	■□□□□ 0.95
NECAB3-222	ENST00000607805	FGF3	P11487	239 aa	Predicted RBP	21	■□□□□ 0.95
NECAB3-222	ENST00000607805	SFTPC	P11686	197 aa		21	■□□□□ 0.95
NECAB3-222	ENST00000607805	FER	P16591	822 aa		21	■□□□□ 0.95
NECAB3-222	ENST00000607805	DES	P17661	470 aa		21	■□□□□ 0.95

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms