RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 HDAC11Q96DB2 347 aa19.22■□□□□ 0.67
CTSA-217ENST00000607482 COQ10AQ96MF6 247 aa19.22■□□□□ 0.67
CTSA-217ENST00000607482 NSMCE3Q96MG7 304 aa19.22■□□□□ 0.67
CTSA-217ENST00000607482 LGMNQ99538 433 aa19.22■□□□□ 0.67
CTSA-217ENST00000607482 BOCQ9BWV1 1114 aa19.22■□□□□ 0.67
CTSA-217ENST00000607482 CLPBQ9H078 707 aa19.22■□□□□ 0.67
CTSA-217ENST00000607482 DTLQ9NZJ0 730 aa19.22■□□□□ 0.67
CTSA-217ENST00000607482 DKK4Q9UBT3 224 aa19.22■□□□□ 0.67
CTSA-217ENST00000607482 CHKBQ9Y259 395 aa19.22■□□□□ 0.67
CTSA-217ENST00000607482 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.22■□□□□ 0.67
CTSA-217ENST00000607482 HYOU1Q9Y4L1 999 aa19.22■□□□□ 0.67
CTSA-217ENST00000607482 ARID1BQ8NFD5 2236 aaPredicted RBP19.21■□□□□ 0.67
CTSA-217ENST00000607482 TMEM202A6NGA9 273 aa19.21■□□□□ 0.67
CTSA-217ENST00000607482 KCNK1O00180 336 aa19.21■□□□□ 0.67
CTSA-217ENST00000607482 PSMD11O00231 422 aa19.21■□□□□ 0.67
CTSA-217ENST00000607482 TAF4O00268 1085 aa19.21■□□□□ 0.67
CTSA-217ENST00000607482 HOXC4P09017 264 aaPredicted RBP19.21■□□□□ 0.67
CTSA-217ENST00000607482 COMTP21964 271 aa19.21■□□□□ 0.67
CTSA-217ENST00000607482 GPR1P46091 355 aa19.21■□□□□ 0.67
CTSA-217ENST00000607482 BIRC2Q13490 618 aa19.21■□□□□ 0.67
CTSA-217ENST00000607482 CRTC1Q6UUV9 634 aa19.21■□□□□ 0.67
CTSA-217ENST00000607482 BZW1Q7L1Q6 419 aaKnown RBP19.21■□□□□ 0.67
CTSA-217ENST00000607482 HSD11B1LQ7Z5J1 315 aa19.21■□□□□ 0.67
CTSA-217ENST00000607482 HEATR4Q86WZ0 1026 aa19.21■□□□□ 0.67
CTSA-217ENST00000607482 CCDC170Q8IYT3 715 aa19.21■□□□□ 0.67
CTSA-217ENST00000607482 WDFY3Q8IZQ1 3526 aa19.21■□□□□ 0.67
CTSA-217ENST00000607482 CACTIN-AS1Q8N1I8 211 aa19.21■□□□□ 0.67
CTSA-217ENST00000607482 FAM46DQ8NEK8 389 aa19.21■□□□□ 0.67
CTSA-217ENST00000607482 LPCAT1Q8NF37 534 aa19.21■□□□□ 0.67
CTSA-217ENST00000607482 DTD2Q96FN9 168 aa19.21■□□□□ 0.67
CTSA-217ENST00000607482 PDXPQ96GD0 296 aa19.21■□□□□ 0.67
CTSA-217ENST00000607482 ADGRE3Q9BY15 652 aa19.21■□□□□ 0.67
CTSA-217ENST00000607482 PCDH9Q9HC56 1237 aa19.21■□□□□ 0.67
CTSA-217ENST00000607482 PNMA8BQ9ULN7 279 aaPredicted RBP19.21■□□□□ 0.67
CTSA-217ENST00000607482 DGKBQ9Y6T7 804 aa19.21■□□□□ 0.67
CTSA-217ENST00000607482 FREM2Q5SZK8 3169 aa19.21■□□□□ 0.67
CTSA-217ENST00000607482 KNTC1P50748 2209 aa19.2■□□□□ 0.66
CTSA-217ENST00000607482 EME2A4GXA9 379 aaPredicted RBP19.2■□□□□ 0.66
CTSA-217ENST00000607482 ZNF487B1APH4 448 aa19.2■□□□□ 0.66
CTSA-217ENST00000607482 TNFRSF10CO14798 259 aa19.2■□□□□ 0.66
CTSA-217ENST00000607482 RRP8O43159 456 aaKnown RBP19.2■□□□□ 0.66
CTSA-217ENST00000607482 CSO75390 466 aaKnown RBP19.2■□□□□ 0.66
CTSA-217ENST00000607482 HLA-DQB2P05538 268 aa19.2■□□□□ 0.66
CTSA-217ENST00000607482 CELA2BP08218 269 aaPredicted RBP19.2■□□□□ 0.66
CTSA-217ENST00000607482 PDHA1P08559 390 aa19.2■□□□□ 0.66
CTSA-217ENST00000607482 MYCLP1P12525 358 aaPredicted RBP19.2■□□□□ 0.66
CTSA-217ENST00000607482 CD86P42081 329 aa19.2■□□□□ 0.66
CTSA-217ENST00000607482 TNNT3P45378 269 aaPredicted RBP19.2■□□□□ 0.66
CTSA-217ENST00000607482 SLC10A2Q12908 348 aaPredicted RBP19.2■□□□□ 0.66
CTSA-217ENST00000607482 TFDP2Q14188 446 aa19.2■□□□□ 0.66
CTSA-217ENST00000607482 LRRC66Q68CR7 880 aa19.2■□□□□ 0.66
CTSA-217ENST00000607482 C19orf48Q6RUI8 117 aa19.2■□□□□ 0.66
CTSA-217ENST00000607482 LRRC69Q6ZNQ3 347 aa19.2■□□□□ 0.66
CTSA-217ENST00000607482 Q6ZVL8 140 aa19.2■□□□□ 0.66
CTSA-217ENST00000607482 TSPAN33Q86UF1 283 aa19.2■□□□□ 0.66
CTSA-217ENST00000607482 VSIG1Q86XK7 387 aa19.2■□□□□ 0.66
CTSA-217ENST00000607482 CCDC50Q8IVM0 306 aa19.2■□□□□ 0.66
CTSA-217ENST00000607482 SLC35F3Q8IY50 421 aa19.2■□□□□ 0.66
CTSA-217ENST00000607482 TC2NQ8N9U0 490 aa19.2■□□□□ 0.66
CTSA-217ENST00000607482 PIH1D2Q8WWB5 315 aa19.2■□□□□ 0.66
CTSA-217ENST00000607482 OR1E3Q8WZA6 343 aa19.2■□□□□ 0.66
CTSA-217ENST00000607482 AP2M1Q96CW1 435 aa19.2■□□□□ 0.66
CTSA-217ENST00000607482 DPEP2Q9H4A9 486 aa19.2■□□□□ 0.66
CTSA-217ENST00000607482 CARS2Q9HA77 564 aaKnown RBP19.2■□□□□ 0.66
CTSA-217ENST00000607482 MRPL40Q9NQ50 206 aaKnown RBP19.2■□□□□ 0.66
CTSA-217ENST00000607482 CD84Q9UIB8 345 aa19.2■□□□□ 0.66
CTSA-217ENST00000607482 PCDHA13Q9Y5I0 950 aa19.2■□□□□ 0.66
CTSA-217ENST00000607482 LY6G6EA0A0G2JKS1 128 aa19.19■□□□□ 0.66
CTSA-217ENST00000607482 USP12O75317 370 aa19.19■□□□□ 0.66
CTSA-217ENST00000607482 ZNF30P17039 623 aa19.19■□□□□ 0.66
CTSA-217ENST00000607482 ACTN2P35609 894 aa19.19■□□□□ 0.66
CTSA-217ENST00000607482 TRIM23P36406 574 aa19.19■□□□□ 0.66
CTSA-217ENST00000607482 RPL26P61254 145 aaKnown RBP19.19■□□□□ 0.66
CTSA-217ENST00000607482 PPIDQ08752 370 aaKnown RBP19.19■□□□□ 0.66
CTSA-217ENST00000607482 SPIDRQ14159 915 aa19.19■□□□□ 0.66
CTSA-217ENST00000607482 KAZNQ674X7 775 aa19.19■□□□□ 0.66
CTSA-217ENST00000607482 CCDC70Q6NSX1 233 aa19.19■□□□□ 0.66
CTSA-217ENST00000607482 DOK6Q6PKX4 331 aa19.19■□□□□ 0.66
CTSA-217ENST00000607482 RBM44Q6ZP01 1051 aaKnown RBP19.19■□□□□ 0.66
CTSA-217ENST00000607482 OR6C4Q8NGE1 309 aa19.19■□□□□ 0.66
CTSA-217ENST00000607482 WDR48Q8TAF3 677 aa19.19■□□□□ 0.66
CTSA-217ENST00000607482 CCHCR1Q8TD31 782 aa19.19■□□□□ 0.66
CTSA-217ENST00000607482 HNRNPLLQ8WVV9 542 aaKnown RBP19.19■□□□□ 0.66
CTSA-217ENST00000607482 AGAP3Q96P47 875 aa19.19■□□□□ 0.66
CTSA-217ENST00000607482 MCCC1Q96RQ3 725 aaPredicted RBP19.19■□□□□ 0.66
CTSA-217ENST00000607482 RBM15Q96T37 977 aaKnown RBP eCLIP19.19■□□□□ 0.66
CTSA-217ENST00000607482 CCDC3Q9BQI4 270 aa19.19■□□□□ 0.66
CTSA-217ENST00000607482 LGR4Q9BXB1 951 aa19.19■□□□□ 0.66
CTSA-217ENST00000607482 TDRD1Q9BXT4 1180 aaKnown RBP19.19■□□□□ 0.66
CTSA-217ENST00000607482 BRD8Q9H0E9 1235 aa19.19■□□□□ 0.66
CTSA-217ENST00000607482 FGF22Q9HCT0 170 aa19.19■□□□□ 0.66
CTSA-217ENST00000607482 RPL26L1Q9UNX3 145 aaKnown RBP19.19■□□□□ 0.66
CTSA-217ENST00000607482 LHX6Q9UPM6 363 aa19.19■□□□□ 0.66
CTSA-217ENST00000607482 U3KQA8 63 aa19.19■□□□□ 0.66
CTSA-217ENST00000607482 DMXL2Q8TDJ6 3036 aa19.19■□□□□ 0.66
CTSA-217ENST00000607482 A0A0J9YYE9 177 aa19.18■□□□□ 0.66
CTSA-217ENST00000607482 PRSS38A1L453 326 aa19.18■□□□□ 0.66
CTSA-217ENST00000607482 TRBC1P01850 177 aa19.18■□□□□ 0.66
CTSA-217ENST00000607482 CAPNS1P04632 268 aa19.18■□□□□ 0.66
CTSA-217ENST00000607482 PYGLP06737 847 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms