RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 CDKL2Q92772 493 aa16.52■□□□□ 0.24
PMF1-206ENST00000606952 DNAJC1Q96KC8 554 aaKnown RBP16.52■□□□□ 0.24
PMF1-206ENST00000606952 MCMBPQ9BTE3 642 aa16.52■□□□□ 0.24
PMF1-206ENST00000606952 OSBPL6Q9BZF3 934 aa16.52■□□□□ 0.24
PMF1-206ENST00000606952 PCDH12Q9NPG4 1184 aa16.52■□□□□ 0.24
PMF1-206ENST00000606952 B4GALT6Q9UBX8 382 aa16.52■□□□□ 0.24
PMF1-206ENST00000606952 LGALS13Q9UHV8 139 aa16.52■□□□□ 0.24
PMF1-206ENST00000606952 CA14Q9ULX7 337 aa16.52■□□□□ 0.24
PMF1-206ENST00000606952 SCML1Q9UN30 329 aa16.52■□□□□ 0.24
PMF1-206ENST00000606952 KCTD3Q9Y597 815 aa16.52■□□□□ 0.24
PMF1-206ENST00000606952 LRRK1Q38SD2 2015 aa16.52■□□□□ 0.23
PMF1-206ENST00000606952 KANSL1LA0AUZ9 987 aa16.51■□□□□ 0.23
PMF1-206ENST00000606952 KPNA3O00505 521 aaPredicted RBP16.51■□□□□ 0.23
PMF1-206ENST00000606952 RASGRF2O14827 1237 aa16.51■□□□□ 0.23
PMF1-206ENST00000606952 AP1G1O43747 822 aa16.51■□□□□ 0.23
PMF1-206ENST00000606952 IL1BP01584 269 aa16.51■□□□□ 0.23
PMF1-206ENST00000606952 ADRB3P13945 408 aa16.51■□□□□ 0.23
PMF1-206ENST00000606952 WASP42768 502 aa16.51■□□□□ 0.23
PMF1-206ENST00000606952 ARSDP51689 593 aa16.51■□□□□ 0.23
PMF1-206ENST00000606952 STC1P52823 247 aa16.51■□□□□ 0.23
PMF1-206ENST00000606952 RPS14P62263 151 aaKnown RBP16.51■□□□□ 0.23
PMF1-206ENST00000606952 IFFO1Q0D2I5 559 aa16.51■□□□□ 0.23
PMF1-206ENST00000606952 ELP6Q0PNE2 266 aa16.51■□□□□ 0.23
PMF1-206ENST00000606952 TEDDM1Q5T9Z0 273 aa16.51■□□□□ 0.23
PMF1-206ENST00000606952 ADGRD1Q6QNK2 874 aa16.51■□□□□ 0.23
PMF1-206ENST00000606952 KIAA0408Q6ZU52 694 aa16.51■□□□□ 0.23
PMF1-206ENST00000606952 ERN2Q76MJ5 926 aaKnown RBP16.51■□□□□ 0.23
PMF1-206ENST00000606952 SLC26A11Q86WA9 606 aa16.51■□□□□ 0.23
PMF1-206ENST00000606952 MMAAQ8IVH4 418 aaKnown RBP16.51■□□□□ 0.23
PMF1-206ENST00000606952 OR13C4Q8NGS5 318 aa16.51■□□□□ 0.23
PMF1-206ENST00000606952 RPLP0P6Q8NHW5 317 aa16.51■□□□□ 0.23
PMF1-206ENST00000606952 PGM2Q96G03 612 aa16.51■□□□□ 0.23
PMF1-206ENST00000606952 CDKN2AIPNLQ96HQ2 116 aa16.51■□□□□ 0.23
PMF1-206ENST00000606952 RUFY1Q96T51 708 aa16.51■□□□□ 0.23
PMF1-206ENST00000606952 FAM167BQ9BTA0 163 aa16.51■□□□□ 0.23
PMF1-206ENST00000606952 GPR63Q9BZJ6 419 aa16.51■□□□□ 0.23
PMF1-206ENST00000606952 POLR3BQ9NW08 1133 aaPredicted RBP16.51■□□□□ 0.23
PMF1-206ENST00000606952 NSMCE4AQ9NXX6 385 aa16.51■□□□□ 0.23
PMF1-206ENST00000606952 GGT7Q9UJ14 662 aa16.51■□□□□ 0.23
PMF1-206ENST00000606952 C1orf232A0A0U1RR37 186 aa16.5■□□□□ 0.23
PMF1-206ENST00000606952 RGSL1A5PLK6 1076 aa16.5■□□□□ 0.23
PMF1-206ENST00000606952 CXorf49A8MYA2 514 aaPredicted RBP16.5■□□□□ 0.23
PMF1-206ENST00000606952 STX7O15400 261 aaKnown RBP16.5■□□□□ 0.23
PMF1-206ENST00000606952 OPA1O60313 960 aa16.5■□□□□ 0.23
PMF1-206ENST00000606952 VAPBO95292 243 aa16.5■□□□□ 0.23
PMF1-206ENST00000606952 P2RY2P41231 377 aa16.5■□□□□ 0.23
PMF1-206ENST00000606952 PSMD8P48556 350 aa16.5■□□□□ 0.23
PMF1-206ENST00000606952 METAP1P53582 386 aa16.5■□□□□ 0.23
PMF1-206ENST00000606952 DCDC1P59894 354 aa16.5■□□□□ 0.23
PMF1-206ENST00000606952 XIAPP98170 497 aa16.5■□□□□ 0.23
PMF1-206ENST00000606952 CREB5Q02930 508 aa16.5■□□□□ 0.23
PMF1-206ENST00000606952 PTSQ03393 145 aa16.5■□□□□ 0.23
PMF1-206ENST00000606952 ILF2Q12905 390 aaKnown RBP16.5■□□□□ 0.23
PMF1-206ENST00000606952 EFTUD2Q15029 972 aaKnown RBP eCLIP16.5■□□□□ 0.232e-7■■□□□ 13.6
PMF1-206ENST00000606952 PTPRRQ15256 657 aa16.5■□□□□ 0.23
PMF1-206ENST00000606952 TMEM52BQ4KMG9 183 aa16.5■□□□□ 0.23
PMF1-206ENST00000606952 CEP85LQ5SZL2 805 aa16.5■□□□□ 0.23
PMF1-206ENST00000606952 PIP5KL1Q5T9C9 394 aa16.5■□□□□ 0.23
PMF1-206ENST00000606952 ZDHHC20Q5W0Z9 365 aa16.5■□□□□ 0.23
PMF1-206ENST00000606952 LRRC66Q68CR7 880 aa16.5■□□□□ 0.23
PMF1-206ENST00000606952 ERAP2Q6P179 960 aa16.5■□□□□ 0.23
PMF1-206ENST00000606952 AFTPHQ6ULP2 937 aa16.5■□□□□ 0.23
PMF1-206ENST00000606952 TSPAN33Q86UF1 283 aa16.5■□□□□ 0.23
PMF1-206ENST00000606952 UNC5BQ8IZJ1 945 aa16.5■□□□□ 0.23
PMF1-206ENST00000606952 PAF1Q8N7H5 531 aa16.5■□□□□ 0.23
PMF1-206ENST00000606952 OR4K2Q8NGD2 314 aa16.5■□□□□ 0.23
PMF1-206ENST00000606952 GABPB2Q8TAK5 448 aaPredicted RBP16.5■□□□□ 0.23
PMF1-206ENST00000606952 CALML6Q8TD86 181 aa16.5■□□□□ 0.23
PMF1-206ENST00000606952 EPS8L3Q8TE67 593 aaKnown RBP16.5■□□□□ 0.23
PMF1-206ENST00000606952 DCAKDQ8WVC6 231 aa16.5■□□□□ 0.23
PMF1-206ENST00000606952 TBATAQ96M53 351 aa16.5■□□□□ 0.23
PMF1-206ENST00000606952 PAFAH2Q99487 392 aa16.5■□□□□ 0.23
PMF1-206ENST00000606952 TMBIM4Q9HC24 238 aa16.5■□□□□ 0.23
PMF1-206ENST00000606952 DYRK4Q9NR20 520 aa16.5■□□□□ 0.23
PMF1-206ENST00000606952 C20orf96Q9NUD7 363 aaPredicted RBP16.5■□□□□ 0.23
PMF1-206ENST00000606952 FAM53CQ9NYF3 392 aa16.5■□□□□ 0.23
PMF1-206ENST00000606952 ZFATQ9P243 1243 aa16.5■□□□□ 0.23
PMF1-206ENST00000606952 PSMC3IPQ9P2W1 217 aaPredicted RBP16.5■□□□□ 0.23
PMF1-206ENST00000606952 FAM155BO75949 473 aa16.49■□□□□ 0.23
PMF1-206ENST00000606952 CLDN7O95471 211 aa16.49■□□□□ 0.23
PMF1-206ENST00000606952 C1SP09871 688 aa16.49■□□□□ 0.23
PMF1-206ENST00000606952 ERVK-10P10266 1014 aa16.49■□□□□ 0.23
PMF1-206ENST00000606952 CD72P21854 359 aa16.49■□□□□ 0.23
PMF1-206ENST00000606952 FOXN2P32314 431 aa16.49■□□□□ 0.23
PMF1-206ENST00000606952 PRAMEP78395 509 aa16.49■□□□□ 0.23
PMF1-206ENST00000606952 CCDC15Q0P6D6 951 aa16.49■□□□□ 0.23
PMF1-206ENST00000606952 KRT71Q3SY84 523 aa16.49■□□□□ 0.23
PMF1-206ENST00000606952 AGBL2Q5U5Z8 902 aa16.49■□□□□ 0.23
PMF1-206ENST00000606952 AGBL4Q5VU57 503 aa16.49■□□□□ 0.23
PMF1-206ENST00000606952 SYT13Q7L8C5 426 aa16.49■□□□□ 0.23
PMF1-206ENST00000606952 TTC7BQ86TV6 843 aa16.49■□□□□ 0.23
PMF1-206ENST00000606952 RASSF3Q86WH2 238 aa16.49■□□□□ 0.23
PMF1-206ENST00000606952 GJD3Q8N144 294 aa16.49■□□□□ 0.23
PMF1-206ENST00000606952 AADATQ8N5Z0 425 aa16.49■□□□□ 0.23
PMF1-206ENST00000606952 HDAC10Q969S8 669 aa16.49■□□□□ 0.23
PMF1-206ENST00000606952 CLDN23Q96B33 292 aa16.49■□□□□ 0.23
PMF1-206ENST00000606952 PLEKHG4BQ96PX9 1271 aa16.49■□□□□ 0.23
PMF1-206ENST00000606952 CPNE1Q99829 537 aa16.49■□□□□ 0.23
PMF1-206ENST00000606952 MKRN2Q9H000 416 aaKnown RBP16.49■□□□□ 0.23
PMF1-206ENST00000606952 CDH19Q9H159 772 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms