RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 SAT1P21673 171 aa21.59■■□□□ 1.05
USP6NL-204ENST00000606752 MTHFRP42898 656 aa21.59■■□□□ 1.05
USP6NL-204ENST00000606752 POU4F1Q01851 419 aa21.59■■□□□ 1.05
USP6NL-204ENST00000606752 RUNX3Q13761 415 aa21.59■■□□□ 1.05
USP6NL-204ENST00000606752 PTPRNQ16849 979 aa21.59■■□□□ 1.05
USP6NL-204ENST00000606752 FASTKD1Q53R41 847 aaKnown RBP21.59■■□□□ 1.05
USP6NL-204ENST00000606752 RAPH1Q70E73 1250 aa21.59■■□□□ 1.05
USP6NL-204ENST00000606752 LDB1Q86U70 411 aaPredicted RBP21.59■■□□□ 1.05
USP6NL-204ENST00000606752 ZSWIM9Q86XI8 627 aa21.59■■□□□ 1.05
USP6NL-204ENST00000606752 SLC41A1Q8IVJ1 513 aa21.59■■□□□ 1.05
USP6NL-204ENST00000606752 GPATCH11Q8N954 259 aa21.59■■□□□ 1.05
USP6NL-204ENST00000606752 CHST14Q8NCH0 376 aa21.59■■□□□ 1.05
USP6NL-204ENST00000606752 ARMC2Q8NEN0 867 aa21.59■■□□□ 1.05
USP6NL-204ENST00000606752 SCG3Q8WXD2 468 aaKnown RBP21.59■■□□□ 1.05
USP6NL-204ENST00000606752 ZNF75CPQ92670 426 aaPredicted RBP21.59■■□□□ 1.05
USP6NL-204ENST00000606752 ELMO2Q96JJ3 720 aa21.59■■□□□ 1.05
USP6NL-204ENST00000606752 C19orf43Q9BQ61 176 aa21.59■■□□□ 1.05
USP6NL-204ENST00000606752 PPIL1Q9Y3C6 166 aa21.59■■□□□ 1.05
USP6NL-204ENST00000606752 H7C0S8 307 aa21.59■■□□□ 1.05
USP6NL-204ENST00000606752 HNF1BP35680 557 aa21.59■■□□□ 1.05
USP6NL-204ENST00000606752 RAB10P61026 200 aa21.59■■□□□ 1.05
USP6NL-204ENST00000606752 ST8SIA6P61647 398 aa21.59■■□□□ 1.05
USP6NL-204ENST00000606752 N4BP2L1Q5TBK1 243 aaPredicted RBP21.59■■□□□ 1.05
USP6NL-204ENST00000606752 LYSMD3Q7Z3D4 306 aa21.59■■□□□ 1.05
USP6NL-204ENST00000606752 EID2BQ96D98 161 aa21.59■■□□□ 1.05
USP6NL-204ENST00000606752 LYSMD1Q96S90 227 aa21.59■■□□□ 1.05
USP6NL-204ENST00000606752 OMDQ99983 421 aa21.59■■□□□ 1.05
USP6NL-204ENST00000606752 HEPHQ9BQS7 1158 aa21.59■■□□□ 1.05
USP6NL-204ENST00000606752 NSRP1Q9H0G5 558 aaKnown RBP21.59■■□□□ 1.05
USP6NL-204ENST00000606752 ZFYVE1Q9HBF4 777 aa21.59■■□□□ 1.05
USP6NL-204ENST00000606752 BPIFA1Q9NP55 256 aa21.59■■□□□ 1.05
USP6NL-204ENST00000606752 PLA2G4CQ9UP65 541 aa21.59■■□□□ 1.05
USP6NL-204ENST00000606752 ANKRD6Q9Y2G4 727 aa21.59■■□□□ 1.05
USP6NL-204ENST00000606752 MTCH2Q9Y6C9 303 aa21.59■■□□□ 1.05
USP6NL-204ENST00000606752 A0A0U1RQS6 177 aa21.58■■□□□ 1.05
USP6NL-204ENST00000606752 CAPN8A6NHC0 703 aa21.58■■□□□ 1.05
USP6NL-204ENST00000606752 PRRT4C9JH25 899 aa21.58■■□□□ 1.05
USP6NL-204ENST00000606752 BMP1P13497 986 aa21.58■■□□□ 1.05
USP6NL-204ENST00000606752 STMN1P16949 149 aa21.58■■□□□ 1.05
USP6NL-204ENST00000606752 CRABP2P29373 138 aa21.58■■□□□ 1.05
USP6NL-204ENST00000606752 PMLP29590 882 aa21.58■■□□□ 1.05
USP6NL-204ENST00000606752 MESP2Q0VG99 397 aa21.58■■□□□ 1.05
USP6NL-204ENST00000606752 GRM2Q14416 872 aa21.58■■□□□ 1.05
USP6NL-204ENST00000606752 ZKSCAN8Q15776 578 aaPredicted RBP21.58■■□□□ 1.05
USP6NL-204ENST00000606752 CDKN3Q16667 212 aa21.58■■□□□ 1.05
USP6NL-204ENST00000606752 TYSND1Q2T9J0 566 aa21.58■■□□□ 1.05
USP6NL-204ENST00000606752 GDPD4Q6W3E5 623 aa21.58■■□□□ 1.05
USP6NL-204ENST00000606752 CLEC14AQ86T13 490 aa21.58■■□□□ 1.05
USP6NL-204ENST00000606752 PNPLA1Q8N8W4 532 aa21.58■■□□□ 1.05
USP6NL-204ENST00000606752 FKBPLQ9UIM3 349 aa21.58■■□□□ 1.05
USP6NL-204ENST00000606752 DOCK8Q8NF50 2099 aa21.58■■□□□ 1.04
USP6NL-204ENST00000606752 UGT2B4P06133 528 aa21.57■■□□□ 1.04
USP6NL-204ENST00000606752 LTBRP36941 435 aa21.57■■□□□ 1.04
USP6NL-204ENST00000606752 SLC12A2P55011 1212 aa21.57■■□□□ 1.04
USP6NL-204ENST00000606752 SEMA3AQ14563 771 aa21.57■■□□□ 1.04
USP6NL-204ENST00000606752 ZSCAN26Q16670 478 aa21.57■■□□□ 1.04
USP6NL-204ENST00000606752 TAF1BQ53T94 588 aaPredicted RBP21.57■■□□□ 1.04
USP6NL-204ENST00000606752 C16orf46Q6P387 395 aa21.57■■□□□ 1.04
USP6NL-204ENST00000606752 PARM1Q6UWI2 310 aa21.57■■□□□ 1.04
USP6NL-204ENST00000606752 NXPE3Q969Y0 559 aa21.57■■□□□ 1.04
USP6NL-204ENST00000606752 SCRN2Q96FV2 425 aa21.57■■□□□ 1.04
USP6NL-204ENST00000606752 MSLNLQ96KJ4 702 aa21.57■■□□□ 1.04
USP6NL-204ENST00000606752 TCF12Q99081 682 aa21.57■■□□□ 1.04
USP6NL-204ENST00000606752 KXD1Q9BQD3 176 aa21.57■■□□□ 1.04
USP6NL-204ENST00000606752 POMKQ9H5K3 350 aa21.57■■□□□ 1.04
USP6NL-204ENST00000606752 MANSC1Q9H8J5 431 aa21.57■■□□□ 1.04
USP6NL-204ENST00000606752 FGFR1OP2Q9NVK5 253 aa21.57■■□□□ 1.04
USP6NL-204ENST00000606752 TMEM216Q9P0N5 145 aa21.57■■□□□ 1.04
USP6NL-204ENST00000606752 EMCNQ9ULC0 261 aa21.57■■□□□ 1.04
USP6NL-204ENST00000606752 C1orf232A0A0U1RR37 186 aa21.57■■□□□ 1.04
USP6NL-204ENST00000606752 ERICH4A6NGS2 130 aa21.57■■□□□ 1.04
USP6NL-204ENST00000606752 PHGDHO43175 533 aaKnown RBP21.57■■□□□ 1.04
USP6NL-204ENST00000606752 PLIN3O60664 434 aa21.57■■□□□ 1.04
USP6NL-204ENST00000606752 COL6A2P12110 1019 aa21.57■■□□□ 1.04
USP6NL-204ENST00000606752 SP100P23497 879 aaPredicted RBP21.57■■□□□ 1.04
USP6NL-204ENST00000606752 MC4RP32245 332 aa21.57■■□□□ 1.04
USP6NL-204ENST00000606752 STC1P52823 247 aa21.57■■□□□ 1.04
USP6NL-204ENST00000606752 TAS2R39P59534 338 aa21.57■■□□□ 1.04
USP6NL-204ENST00000606752 EIF4HQ15056 248 aaKnown RBP21.57■■□□□ 1.04
USP6NL-204ENST00000606752 LCA5Q86VQ0 697 aa21.57■■□□□ 1.04
USP6NL-204ENST00000606752 CEP97Q8IW35 865 aa21.57■■□□□ 1.04
USP6NL-204ENST00000606752 PLD6Q8N2A8 252 aaKnown RBP21.57■■□□□ 1.04
USP6NL-204ENST00000606752 FGF14Q92915 247 aa21.57■■□□□ 1.04
USP6NL-204ENST00000606752 INTS10Q9NVR2 710 aaKnown RBP21.57■■□□□ 1.04
USP6NL-204ENST00000606752 CORO1CQ9ULV4 474 aaPredicted RBP21.57■■□□□ 1.04
USP6NL-204ENST00000606752 ACOT9Q9Y305 439 aa21.57■■□□□ 1.04
USP6NL-204ENST00000606752 BIRC5O15392 142 aa21.56■■□□□ 1.04
USP6NL-204ENST00000606752 SLC35E2BP0CK96 405 aa21.56■■□□□ 1.04
USP6NL-204ENST00000606752 NEFHP12036 1026 aa21.56■■□□□ 1.04
USP6NL-204ENST00000606752 GMPRP36959 345 aa21.56■■□□□ 1.04
USP6NL-204ENST00000606752 POLR2LP62875 67 aaKnown RBP21.56■■□□□ 1.04
USP6NL-204ENST00000606752 PEX6Q13608 980 aa21.56■■□□□ 1.04
USP6NL-204ENST00000606752 LRIT3Q3SXY7 679 aa21.56■■□□□ 1.04
USP6NL-204ENST00000606752 CCDC153Q494R4 210 aa21.56■■□□□ 1.04
USP6NL-204ENST00000606752 RBM20Q5T481 1227 aaKnown RBP21.56■■□□□ 1.04
USP6NL-204ENST00000606752 GKAP1Q5VSY0 366 aaPredicted RBP21.56■■□□□ 1.04
USP6NL-204ENST00000606752 TPRG1Q6ZUI0 275 aa21.56■■□□□ 1.04
USP6NL-204ENST00000606752 USP45Q70EL2 814 aa21.56■■□□□ 1.04
USP6NL-204ENST00000606752 KDM1BQ8NB78 822 aa21.56■■□□□ 1.04
USP6NL-204ENST00000606752 KLHL32Q96NJ5 620 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms