RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.38■□□□□ 0.37
PPFIA3-207ENST00000602716 OR51F1A6NGY5 319 aa17.38■□□□□ 0.37
PPFIA3-207ENST00000602716 SOCS5O75159 536 aa17.38■□□□□ 0.37
PPFIA3-207ENST00000602716 LEFTY1O75610 366 aa17.38■□□□□ 0.37
PPFIA3-207ENST00000602716 CHRM1P11229 460 aaPredicted RBP17.38■□□□□ 0.37
PPFIA3-207ENST00000602716 SERPINA4P29622 427 aa17.38■□□□□ 0.37
PPFIA3-207ENST00000602716 EIF2DP41214 584 aaKnown RBP17.38■□□□□ 0.37
PPFIA3-207ENST00000602716 SKIV2L2P42285 1042 aaKnown RBP17.38■□□□□ 0.37
PPFIA3-207ENST00000602716 ABCG1P45844 678 aa17.38■□□□□ 0.37
PPFIA3-207ENST00000602716 MAPK8P45983 427 aa17.38■□□□□ 0.37
PPFIA3-207ENST00000602716 ARCN1P48444 511 aaKnown RBP17.38■□□□□ 0.37
PPFIA3-207ENST00000602716 GALK1P51570 392 aa17.38■□□□□ 0.37
PPFIA3-207ENST00000602716 HSP90AA5PQ58FG0 334 aa17.38■□□□□ 0.37
PPFIA3-207ENST00000602716 KCNMB4Q86W47 210 aa17.38■□□□□ 0.37
PPFIA3-207ENST00000602716 CSGALNACT1Q8TDX6 532 aa17.38■□□□□ 0.37
PPFIA3-207ENST00000602716 EID2BQ96D98 161 aa17.38■□□□□ 0.37
PPFIA3-207ENST00000602716 ECHDC3Q96DC8 303 aa17.38■□□□□ 0.37
PPFIA3-207ENST00000602716 SMC6Q96SB8 1091 aa17.38■□□□□ 0.37
PPFIA3-207ENST00000602716 MRM3Q9HC36 420 aaKnown RBP17.38■□□□□ 0.37
PPFIA3-207ENST00000602716 C20orf96Q9NUD7 363 aaPredicted RBP17.38■□□□□ 0.37
PPFIA3-207ENST00000602716 PSMC3IPQ9P2W1 217 aaPredicted RBP17.38■□□□□ 0.37
PPFIA3-207ENST00000602716 GRID1Q9ULK0 1009 aa17.38■□□□□ 0.37
PPFIA3-207ENST00000602716 SPECC1L-ADORA2AF8WAN1 911 aa17.38■□□□□ 0.37
PPFIA3-207ENST00000602716 VAPBO95292 243 aa17.38■□□□□ 0.37
PPFIA3-207ENST00000602716 KRT15P19012 456 aa17.38■□□□□ 0.37
PPFIA3-207ENST00000602716 GRIA2P42262 883 aa17.38■□□□□ 0.37
PPFIA3-207ENST00000602716 WASP42768 502 aa17.38■□□□□ 0.37
PPFIA3-207ENST00000602716 VASPP50552 380 aaPredicted RBP17.38■□□□□ 0.37
PPFIA3-207ENST00000602716 ZNF140P52738 457 aaPredicted RBP17.38■□□□□ 0.37
PPFIA3-207ENST00000602716 SEC13P55735 322 aa17.38■□□□□ 0.37
PPFIA3-207ENST00000602716 BMPR2Q13873 1038 aa17.38■□□□□ 0.37
PPFIA3-207ENST00000602716 E2F5Q15329 346 aa17.38■□□□□ 0.37
PPFIA3-207ENST00000602716 LEXMQ3ZCV2 418 aa17.38■□□□□ 0.37
PPFIA3-207ENST00000602716 PTCRAQ6ISU1 281 aaPredicted RBP17.38■□□□□ 0.37
PPFIA3-207ENST00000602716 GLT6D1Q7Z4J2 308 aa17.38■□□□□ 0.37
PPFIA3-207ENST00000602716 PTCD2Q8WV60 388 aaKnown RBP17.38■□□□□ 0.37
PPFIA3-207ENST00000602716 ADGRE3Q9BY15 652 aa17.38■□□□□ 0.37
PPFIA3-207ENST00000602716 TMEM245Q9H330 911 aa17.38■□□□□ 0.37
PPFIA3-207ENST00000602716 POLR3BQ9NW08 1133 aaPredicted RBP17.38■□□□□ 0.37
PPFIA3-207ENST00000602716 MAGEB16A2A368 324 aa17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 A8MX80 341 aa17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 SIN3BO75182 1162 aa17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 POP4O95707 220 aaKnown RBP17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 KRT16P08779 473 aa17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 RPA3P35244 121 aaPredicted RBP17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 EPHB1P54762 984 aa17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 ST8SIA6P61647 398 aa17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 PDK4Q16654 411 aa17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 ARSIQ5FYB1 569 aa17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 C9orf64Q5T6V5 341 aa17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 MARK2Q7KZI7 788 aaKnown RBP17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 LYSMD3Q7Z3D4 306 aa17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 C4orf33Q8N1A6 199 aa17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 STK40Q8N2I9 435 aa17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 KIF2BQ8N4N8 673 aa17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 TTC30BQ8N4P2 665 aa17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 MZB1Q8WU39 189 aa17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 KLHL32Q96NJ5 620 aa17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 TUBGCP5Q96RT8 1024 aa17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 P2RY13Q9BPV8 354 aa17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 SUV39H2Q9H5I1 410 aa17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 SUDS3Q9H7L9 328 aaPredicted RBP17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 IARS2Q9NSE4 1012 aaKnown RBP17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 FETUBQ9UGM5 382 aa17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 SARDHQ9UL12 918 aa17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 PLA2G4CQ9UP65 541 aa17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 PIAS3Q9Y6X2 628 aa17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 TCF20Q9UGU0 1960 aaKnown RBP17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 SHISA7A6NL88 538 aa17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 TYROBPO43914 113 aa17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 APODP05090 189 aa17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 NNMTP40261 264 aa17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 MSH2P43246 934 aa17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 GRIA4P48058 902 aa17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 DNAJC3Q13217 504 aa17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 HNRNPA1L2Q32P51 320 aaKnown RBP17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 KIAA0930Q6ICG6 404 aaPredicted RBP17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 ADGRD1Q6QNK2 874 aa17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 SERPINA13PQ6UXR4 307 aa17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 TSPAN33Q86UF1 283 aa17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 LRRC6Q86X45 466 aa17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 BRSK1Q8TDC3 778 aa17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 SPOCK2Q92563 424 aa17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 MYCBPQ99417 103 aaPredicted RBP17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 HEPHQ9BQS7 1158 aa17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 CPEB1Q9BZB8 566 aaKnown RBP17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 THAP10Q9P2Z0 257 aaPredicted RBP17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 PHTF1Q9UMS5 762 aa17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 ZNF711Q9Y462 761 aa17.37■□□□□ 0.37
PPFIA3-207ENST00000602716 A0A0J9YYE9 177 aa17.36■□□□□ 0.37
PPFIA3-207ENST00000602716 HMX2A2RU54 273 aa17.36■□□□□ 0.37
PPFIA3-207ENST00000602716 NPIPB15A6NHN6 443 aaPredicted RBP17.36■□□□□ 0.37
PPFIA3-207ENST00000602716 K7EQS6 105 aa17.36■□□□□ 0.37
PPFIA3-207ENST00000602716 TRBC1P01850 177 aa17.36■□□□□ 0.37
PPFIA3-207ENST00000602716 PRSS56P0CW18 603 aa17.36■□□□□ 0.37
PPFIA3-207ENST00000602716 CA4P22748 312 aa17.36■□□□□ 0.37
PPFIA3-207ENST00000602716 RECQLP46063 649 aaPredicted RBP17.36■□□□□ 0.37
PPFIA3-207ENST00000602716 PON2Q15165 354 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms