RNA–Protein interactions for RNA: ENST00000601689.1

UPF1-212, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-212ENST00000601689 EID2Q8N6I1 236 aa19.38■□□□□ 0.69
UPF1-212ENST00000601689 TRIM58Q8NG06 486 aa19.38■□□□□ 0.69
UPF1-212ENST00000601689 ALG3Q92685 438 aa19.38■□□□□ 0.69
UPF1-212ENST00000601689 NSMCE3Q96MG7 304 aa19.38■□□□□ 0.69
UPF1-212ENST00000601689 PHPT1Q9NRX4 125 aaPredicted RBP19.38■□□□□ 0.69
UPF1-212ENST00000601689 GPR27Q9NS67 375 aa19.38■□□□□ 0.69
UPF1-212ENST00000601689 FAM153AQ9UHL3 310 aa19.38■□□□□ 0.69
UPF1-212ENST00000601689 DOLKQ9UPQ8 538 aa19.38■□□□□ 0.69
UPF1-212ENST00000601689 SPAARA0A1B0GVQ0 90 aa19.37■□□□□ 0.69
UPF1-212ENST00000601689 SDC3O75056 442 aa19.37■□□□□ 0.69
UPF1-212ENST00000601689 PIAS2O75928 621 aa19.37■□□□□ 0.69
UPF1-212ENST00000601689 ALPIP09923 528 aa19.37■□□□□ 0.69
UPF1-212ENST00000601689 CDK4P11802 303 aa19.37■□□□□ 0.69
UPF1-212ENST00000601689 NME1P15531 152 aaKnown RBP19.37■□□□□ 0.69
UPF1-212ENST00000601689 DGKAP23743 735 aa19.37■□□□□ 0.69
UPF1-212ENST00000601689 CDK18Q07002 472 aa19.37■□□□□ 0.69
UPF1-212ENST00000601689 FZD2Q14332 565 aa19.37■□□□□ 0.69
UPF1-212ENST00000601689 NFATC4Q14934 902 aa19.37■□□□□ 0.69
UPF1-212ENST00000601689 PCSK7Q16549 785 aa19.37■□□□□ 0.69
UPF1-212ENST00000601689 LRRC66Q68CR7 880 aa19.37■□□□□ 0.69
UPF1-212ENST00000601689 ESRP1Q6NXG1 681 aaKnown RBP19.37■□□□□ 0.69
UPF1-212ENST00000601689 B4GALNT4Q76KP1 1039 aa19.37■□□□□ 0.69
UPF1-212ENST00000601689 CNDP2Q96KP4 475 aaKnown RBP19.37■□□□□ 0.69
UPF1-212ENST00000601689 COQ10AQ96MF6 247 aa19.37■□□□□ 0.69
UPF1-212ENST00000601689 WDR26Q9H7D7 661 aa19.37■□□□□ 0.69
UPF1-212ENST00000601689 PKD2L2Q9NZM6 624 aa19.37■□□□□ 0.69
UPF1-212ENST00000601689 APOBEC3BQ9UH17 382 aaKnown RBP19.37■□□□□ 0.69
UPF1-212ENST00000601689 RSPH14Q9UHP6 348 aa19.37■□□□□ 0.69
UPF1-212ENST00000601689 A0A0U1RQJ8 604 aa19.36■□□□□ 0.69
UPF1-212ENST00000601689 C1orf232A0A0U1RR37 186 aa19.36■□□□□ 0.69
UPF1-212ENST00000601689 MED19A0JLT2 244 aaPredicted RBP19.36■□□□□ 0.69
UPF1-212ENST00000601689 GOLGA8CPA6NN73 597 aa19.36■□□□□ 0.69
UPF1-212ENST00000601689 CBFA2T3O75081 653 aa19.36■□□□□ 0.69
UPF1-212ENST00000601689 PMPCBO75439 489 aa19.36■□□□□ 0.69
UPF1-212ENST00000601689 ANXA9O76027 345 aa19.36■□□□□ 0.69
UPF1-212ENST00000601689 RASGRP1O95267 797 aa19.36■□□□□ 0.69
UPF1-212ENST00000601689 TNFP01375 233 aa19.36■□□□□ 0.69
UPF1-212ENST00000601689 MSNP26038 577 aaKnown RBP19.36■□□□□ 0.69
UPF1-212ENST00000601689 RBL1P28749 1068 aa19.36■□□□□ 0.69
UPF1-212ENST00000601689 CCZ1BP86790 482 aa19.36■□□□□ 0.69
UPF1-212ENST00000601689 CCZ1P86791 482 aaPredicted RBP19.36■□□□□ 0.69
UPF1-212ENST00000601689 ZNF211Q13398 564 aaPredicted RBP19.36■□□□□ 0.69
UPF1-212ENST00000601689 SHBQ15464 509 aa19.36■□□□□ 0.69
UPF1-212ENST00000601689 RAET1GQ6H3X3 334 aa19.36■□□□□ 0.69
UPF1-212ENST00000601689 PNCKQ6P2M8 343 aa19.36■□□□□ 0.69
UPF1-212ENST00000601689 CRTC1Q6UUV9 634 aa19.36■□□□□ 0.69
UPF1-212ENST00000601689 NRSN1Q8IZ57 195 aa19.36■□□□□ 0.69
UPF1-212ENST00000601689 SCG3Q8WXD2 468 aaKnown RBP19.36■□□□□ 0.69
UPF1-212ENST00000601689 GLMNQ92990 594 aa19.36■□□□□ 0.69
UPF1-212ENST00000601689 DTD2Q96FN9 168 aa19.36■□□□□ 0.69
UPF1-212ENST00000601689 TBATAQ96M53 351 aa19.36■□□□□ 0.69
UPF1-212ENST00000601689 WDR92Q96MX6 357 aa19.36■□□□□ 0.69
UPF1-212ENST00000601689 FCRL5Q96RD9 977 aa19.36■□□□□ 0.69
UPF1-212ENST00000601689 LYSMD1Q96S90 227 aa19.36■□□□□ 0.69
UPF1-212ENST00000601689 FSD1LQ9BXM9 530 aa19.36■□□□□ 0.69
UPF1-212ENST00000601689 RAD18Q9NS91 495 aa19.36■□□□□ 0.69
UPF1-212ENST00000601689 KLQ9UEF7 1012 aa19.36■□□□□ 0.69
UPF1-212ENST00000601689 AAR2Q9Y312 384 aaKnown RBP19.36■□□□□ 0.69
UPF1-212ENST00000601689 CSNK1G3Q9Y6M4 447 aa19.36■□□□□ 0.69
UPF1-212ENST00000601689 RGSL1A5PLK6 1076 aa19.35■□□□□ 0.69
UPF1-212ENST00000601689 DDX3YO15523 660 aaKnown RBP19.35■□□□□ 0.69
UPF1-212ENST00000601689 KCNN4O15554 427 aa19.35■□□□□ 0.69
UPF1-212ENST00000601689 ZSCAN12O43309 604 aa19.35■□□□□ 0.69
UPF1-212ENST00000601689 NDST3O95803 873 aa19.35■□□□□ 0.69
UPF1-212ENST00000601689 MMP2P08253 660 aa19.35■□□□□ 0.69
UPF1-212ENST00000601689 HOXC4P09017 264 aaPredicted RBP19.35■□□□□ 0.69
UPF1-212ENST00000601689 GPR1P46091 355 aa19.35■□□□□ 0.69
UPF1-212ENST00000601689 GEMP55040 296 aa19.35■□□□□ 0.69
UPF1-212ENST00000601689 DAB2P98082 770 aa19.35■□□□□ 0.69
UPF1-212ENST00000601689 WASHC5Q12768 1159 aa19.35■□□□□ 0.69
UPF1-212ENST00000601689 FOXC1Q12948 553 aa19.35■□□□□ 0.69
UPF1-212ENST00000601689 MPP3Q13368 585 aa19.35■□□□□ 0.69
UPF1-212ENST00000601689 ELOCQ15369 112 aa19.35■□□□□ 0.69
UPF1-212ENST00000601689 ZNF542PQ5EBM4 170 aa19.35■□□□□ 0.69
UPF1-212ENST00000601689 KDELC2Q7Z4H8 507 aa19.35■□□□□ 0.69
UPF1-212ENST00000601689 PHACTR4Q8IZ21 702 aa19.35■□□□□ 0.69
UPF1-212ENST00000601689 ZNF567Q8N184 647 aa19.35■□□□□ 0.69
UPF1-212ENST00000601689 SDR16C5Q8N3Y7 309 aa19.35■□□□□ 0.69
UPF1-212ENST00000601689 AP2M1Q96CW1 435 aa19.35■□□□□ 0.69
UPF1-212ENST00000601689 FRMD8P1Q9BZ68 369 aaPredicted RBP19.35■□□□□ 0.69
UPF1-212ENST00000601689 ZFYVE1Q9HBF4 777 aa19.35■□□□□ 0.69
UPF1-212ENST00000601689 NCKIPSDQ9NZQ3 722 aa19.35■□□□□ 0.69
UPF1-212ENST00000601689 BTBD3Q9Y2F9 522 aa19.35■□□□□ 0.69
UPF1-212ENST00000601689 PPP2R2CQ9Y2T4 447 aa19.35■□□□□ 0.69
UPF1-212ENST00000601689 OR1A2Q9Y585 309 aa19.35■□□□□ 0.69
UPF1-212ENST00000601689 ENC1O14682 589 aa19.34■□□□□ 0.69
UPF1-212ENST00000601689 SCAMP1O15126 338 aa19.34■□□□□ 0.69
UPF1-212ENST00000601689 AQP9O43315 295 aa19.34■□□□□ 0.69
UPF1-212ENST00000601689 MT-CYBP00156 380 aaPredicted RBP19.34■□□□□ 0.69
UPF1-212ENST00000601689 EPOP01588 193 aa19.34■□□□□ 0.69
UPF1-212ENST00000601689 FTH1P19P0C7X4 201 aa19.34■□□□□ 0.69
UPF1-212ENST00000601689 NFKB1P19838 968 aa19.34■□□□□ 0.69
UPF1-212ENST00000601689 LHCGRP22888 699 aa19.34■□□□□ 0.69
UPF1-212ENST00000601689 TEAD1P28347 426 aa19.34■□□□□ 0.69
UPF1-212ENST00000601689 ACTN2P35609 894 aa19.34■□□□□ 0.69
UPF1-212ENST00000601689 TRIM23P36406 574 aa19.34■□□□□ 0.69
UPF1-212ENST00000601689 ETV3P41162 512 aa19.34■□□□□ 0.69
UPF1-212ENST00000601689 DUSP3P51452 185 aaPredicted RBP19.34■□□□□ 0.69
UPF1-212ENST00000601689 KIAA1024LP59773 190 aa19.34■□□□□ 0.69
UPF1-212ENST00000601689 PTSQ03393 145 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms