RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 FAM53CQ9NYF3 392 aa22.61■■□□□ 1.21
IRF3-228ENST00000601291 SARDHQ9UL12 918 aa22.61■■□□□ 1.21
IRF3-228ENST00000601291 IQANK1A0A1B0GTG1 560 aa22.6■■□□□ 1.21
IRF3-228ENST00000601291 RNF40O75150 1001 aa22.6■■□□□ 1.21
IRF3-228ENST00000601291 PSMA3P25788 255 aa22.6■■□□□ 1.21
IRF3-228ENST00000601291 SERPINB9P50453 376 aa22.6■■□□□ 1.21
IRF3-228ENST00000601291 POM121L1PQ3SYA9 428 aa22.6■■□□□ 1.21
IRF3-228ENST00000601291 ERAP2Q6P179 960 aa22.6■■□□□ 1.21
IRF3-228ENST00000601291 TTC7BQ86TV6 843 aa22.6■■□□□ 1.21
IRF3-228ENST00000601291 MMAAQ8IVH4 418 aaKnown RBP22.6■■□□□ 1.21
IRF3-228ENST00000601291 CNTN4Q8IWV2 1026 aa22.6■■□□□ 1.21
IRF3-228ENST00000601291 IL17RCQ8NAC3 791 aa22.6■■□□□ 1.21
IRF3-228ENST00000601291 TBATAQ96M53 351 aa22.6■■□□□ 1.21
IRF3-228ENST00000601291 MFSD1Q9H3U5 465 aa22.6■■□□□ 1.21
IRF3-228ENST00000601291 FBRSQ9HAH7 460 aa22.6■■□□□ 1.21
IRF3-228ENST00000601291 GOLGA8TH3BQL2 631 aa22.59■■□□□ 1.21
IRF3-228ENST00000601291 KLF8O95600 359 aaPredicted RBP22.59■■□□□ 1.21
IRF3-228ENST00000601291 CHRM1P11229 460 aaPredicted RBP22.59■■□□□ 1.21
IRF3-228ENST00000601291 TIMP2P16035 220 aa22.59■■□□□ 1.21
IRF3-228ENST00000601291 ARSDP51689 593 aa22.59■■□□□ 1.21
IRF3-228ENST00000601291 ARHGEF7Q14155 803 aa22.59■■□□□ 1.21
IRF3-228ENST00000601291 PTPRCAPQ14761 206 aa22.59■■□□□ 1.21
IRF3-228ENST00000601291 KCTD16Q68DU8 428 aa22.59■■□□□ 1.21
IRF3-228ENST00000601291 NEPROQ6NW34 567 aa22.59■■□□□ 1.21
IRF3-228ENST00000601291 AFTPHQ6ULP2 937 aa22.59■■□□□ 1.21
IRF3-228ENST00000601291 CRTC1Q6UUV9 634 aa22.59■■□□□ 1.21
IRF3-228ENST00000601291 PARS2Q7L3T8 475 aaKnown RBP22.59■■□□□ 1.21
IRF3-228ENST00000601291 OTUD6BQ8N6M0 293 aa22.59■■□□□ 1.21
IRF3-228ENST00000601291 CDKN2AIPNLQ96HQ2 116 aa22.59■■□□□ 1.21
IRF3-228ENST00000601291 AGAP2Q99490 1192 aa22.59■■□□□ 1.21
IRF3-228ENST00000601291 RSPH9Q9H1X1 276 aaPredicted RBP22.59■■□□□ 1.21
IRF3-228ENST00000601291 IL17CQ9P0M4 197 aa22.59■■□□□ 1.21
IRF3-228ENST00000601291 B4GALT6Q9UBX8 382 aa22.59■■□□□ 1.21
IRF3-228ENST00000601291 GGT7Q9UJ14 662 aa22.59■■□□□ 1.21
IRF3-228ENST00000601291 NOVA2Q9UNW9 492 aaKnown RBP22.59■■□□□ 1.21
IRF3-228ENST00000601291 CCL22O00626 93 aa22.59■■□□□ 1.21
IRF3-228ENST00000601291 KRT37O76014 449 aa22.59■■□□□ 1.21
IRF3-228ENST00000601291 KRT38O76015 456 aa22.59■■□□□ 1.21
IRF3-228ENST00000601291 CLDN7O95471 211 aa22.59■■□□□ 1.21
IRF3-228ENST00000601291 ZNF30P17039 623 aa22.59■■□□□ 1.21
IRF3-228ENST00000601291 KRT15P19012 456 aa22.59■■□□□ 1.21
IRF3-228ENST00000601291 CNTFP26441 200 aa22.59■■□□□ 1.21
IRF3-228ENST00000601291 VIPR1P32241 457 aa22.59■■□□□ 1.21
IRF3-228ENST00000601291 GP5P40197 560 aa22.59■■□□□ 1.21
IRF3-228ENST00000601291 PSMD8P48556 350 aa22.59■■□□□ 1.21
IRF3-228ENST00000601291 SUOXP51687 545 aa22.59■■□□□ 1.21
IRF3-228ENST00000601291 PRKCQQ04759 706 aa22.59■■□□□ 1.21
IRF3-228ENST00000601291 CDKN3Q16667 212 aa22.59■■□□□ 1.21
IRF3-228ENST00000601291 HSF5Q4G112 596 aaPredicted RBP22.59■■□□□ 1.21
IRF3-228ENST00000601291 LRRC73Q5JTD7 316 aa22.59■■□□□ 1.21
IRF3-228ENST00000601291 LRRC66Q68CR7 880 aa22.59■■□□□ 1.21
IRF3-228ENST00000601291 FBXL19Q6PCT2 694 aa22.59■■□□□ 1.21
IRF3-228ENST00000601291 PACS1Q6VY07 963 aa22.59■■□□□ 1.21
IRF3-228ENST00000601291 ZNF852Q6ZMS4 543 aa22.59■■□□□ 1.21
IRF3-228ENST00000601291 KRT222Q8N1A0 295 aa22.59■■□□□ 1.21
IRF3-228ENST00000601291 TXNDC5Q8NBS9 432 aaKnown RBP22.59■■□□□ 1.21
IRF3-228ENST00000601291 PBXIP1Q96AQ6 731 aa22.59■■□□□ 1.21
IRF3-228ENST00000601291 PCDH12Q9NPG4 1184 aa22.59■■□□□ 1.21
IRF3-228ENST00000601291 SLC17A6Q9P2U8 582 aa22.59■■□□□ 1.21
IRF3-228ENST00000601291 A8MX80 341 aa22.58■■□□□ 1.2
IRF3-228ENST00000601291 UGT1A9O60656 530 aa22.58■■□□□ 1.2
IRF3-228ENST00000601291 GOT2P00505 430 aaKnown RBP22.58■■□□□ 1.2
IRF3-228ENST00000601291 HOXB2P14652 356 aa22.58■■□□□ 1.2
IRF3-228ENST00000601291 OAS2P29728 719 aaKnown RBP22.58■■□□□ 1.2
IRF3-228ENST00000601291 GRTP1Q5TC63 336 aa22.58■■□□□ 1.2
IRF3-228ENST00000601291 ZNF470Q6ECI4 717 aa22.58■■□□□ 1.2
IRF3-228ENST00000601291 PTAR1Q7Z6K3 402 aaPredicted RBP22.58■■□□□ 1.2
IRF3-228ENST00000601291 STRA8Q7Z7C7 330 aa22.58■■□□□ 1.2
IRF3-228ENST00000601291 TSPAN33Q86UF1 283 aa22.58■■□□□ 1.2
IRF3-228ENST00000601291 OR4L1Q8NH43 312 aa22.58■■□□□ 1.2
IRF3-228ENST00000601291 ARRDC3Q96B67 414 aa22.58■■□□□ 1.2
IRF3-228ENST00000601291 UGT1A7Q9HAW7 530 aa22.58■■□□□ 1.2
IRF3-228ENST00000601291 UGT1A10Q9HAW8 530 aa22.58■■□□□ 1.2
IRF3-228ENST00000601291 UGT1A8Q9HAW9 530 aa22.58■■□□□ 1.2
IRF3-228ENST00000601291 BPIFA1Q9NP55 256 aa22.58■■□□□ 1.2
IRF3-228ENST00000601291 ARHGEF3Q9NR81 526 aa22.58■■□□□ 1.2
IRF3-228ENST00000601291 TCF20Q9UGU0 1960 aaKnown RBP22.57■■□□□ 1.2
IRF3-228ENST00000601291 A0A0U1RQS6 177 aa22.57■■□□□ 1.2
IRF3-228ENST00000601291 CCDC162PA2VCL2 907 aa22.57■■□□□ 1.2
IRF3-228ENST00000601291 H7C0S8 307 aa22.57■■□□□ 1.2
IRF3-228ENST00000601291 FAM155BO75949 473 aa22.57■■□□□ 1.2
IRF3-228ENST00000601291 ADH1BP00325 375 aa22.57■■□□□ 1.2
IRF3-228ENST00000601291 NEK3P51956 506 aa22.57■■□□□ 1.2
IRF3-228ENST00000601291 CSE1LP55060 971 aaKnown RBP22.57■■□□□ 1.2
IRF3-228ENST00000601291 ELP6Q0PNE2 266 aa22.57■■□□□ 1.2
IRF3-228ENST00000601291 CCINQ13939 588 aa22.57■■□□□ 1.2
IRF3-228ENST00000601291 TNFAIP8L3Q5GJ75 292 aa22.57■■□□□ 1.2
IRF3-228ENST00000601291 ZNF776Q68DI1 518 aaPredicted RBP22.57■■□□□ 1.2
IRF3-228ENST00000601291 MRNIPQ6NTE8 343 aa22.57■■□□□ 1.2
IRF3-228ENST00000601291 KIAA0408Q6ZU52 694 aa22.57■■□□□ 1.2
IRF3-228ENST00000601291 DPPA4Q7L190 304 aa22.57■■□□□ 1.2
IRF3-228ENST00000601291 OR2T3Q8NH03 318 aa22.57■■□□□ 1.2
IRF3-228ENST00000601291 TLCD1Q96CP7 247 aa22.57■■□□□ 1.2
IRF3-228ENST00000601291 SUDS3Q9H7L9 328 aaPredicted RBP22.57■■□□□ 1.2
IRF3-228ENST00000601291 CATSPERZQ9NTU4 200 aa22.57■■□□□ 1.2
IRF3-228ENST00000601291 FKBPLQ9UIM3 349 aa22.57■■□□□ 1.2
IRF3-228ENST00000601291 CA14Q9ULX7 337 aa22.57■■□□□ 1.2
IRF3-228ENST00000601291 NDRG2Q9UN36 371 aaKnown RBP22.57■■□□□ 1.2
IRF3-228ENST00000601291 PSAT1Q9Y617 370 aa22.57■■□□□ 1.2
IRF3-228ENST00000601291 SHISA7A6NL88 538 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms