RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 FGF22Q9HCT0 170 aa15.82■□□□□ 0.12
VRK3-221ENST00000600284 NT5MQ9NPB1 228 aa15.82■□□□□ 0.12
VRK3-221ENST00000600284 PHPT1Q9NRX4 125 aaPredicted RBP15.82■□□□□ 0.12
VRK3-221ENST00000600284 PCDHGA8Q9Y5G5 932 aa15.82■□□□□ 0.12
VRK3-221ENST00000600284 ENTPD2Q9Y5L3 495 aa15.82■□□□□ 0.12
VRK3-221ENST00000600284 ITPR1Q14643 2758 aa15.81■□□□□ 0.12
VRK3-221ENST00000600284 TMX2-CTNND1H3BSU7 103 aa15.81■□□□□ 0.12
VRK3-221ENST00000600284 MFSD11O43934 449 aa15.81■□□□□ 0.12
VRK3-221ENST00000600284 TPM1P09493 284 aa15.81■□□□□ 0.12
VRK3-221ENST00000600284 TMEM253P0C7T8 217 aa15.81■□□□□ 0.12
VRK3-221ENST00000600284 MYCLP1P12525 358 aaPredicted RBP15.81■□□□□ 0.12
VRK3-221ENST00000600284 PNLIPP16233 465 aa15.81■□□□□ 0.12
VRK3-221ENST00000600284 MX2P20592 715 aa15.81■□□□□ 0.12
VRK3-221ENST00000600284 ITPKBP27987 946 aa15.81■□□□□ 0.12
VRK3-221ENST00000600284 MLLT3P42568 568 aaPredicted RBP15.81■□□□□ 0.12
VRK3-221ENST00000600284 PCBP4P57723 403 aaKnown RBP15.81■□□□□ 0.12
VRK3-221ENST00000600284 DPTQ07507 201 aa15.81■□□□□ 0.12
VRK3-221ENST00000600284 ARHGEF7Q14155 803 aa15.81■□□□□ 0.12
VRK3-221ENST00000600284 SPIDRQ14159 915 aa15.81■□□□□ 0.12
VRK3-221ENST00000600284 TAF8Q7Z7C8 310 aa15.81■□□□□ 0.12
VRK3-221ENST00000600284 NLRP8Q86W28 1048 aa15.81■□□□□ 0.12
VRK3-221ENST00000600284 RAVER1Q8IY67 606 aaKnown RBP15.81■□□□□ 0.12
VRK3-221ENST00000600284 KYQ8NBH2 561 aa15.81■□□□□ 0.12
VRK3-221ENST00000600284 PIH1D2Q8WWB5 315 aa15.81■□□□□ 0.12
VRK3-221ENST00000600284 SEMA3CQ99985 751 aa15.81■□□□□ 0.12
VRK3-221ENST00000600284 LGR4Q9BXB1 951 aa15.81■□□□□ 0.12
VRK3-221ENST00000600284 DEF6Q9H4E7 631 aa15.81■□□□□ 0.12
VRK3-221ENST00000600284 THSD1Q9NS62 852 aa15.81■□□□□ 0.12
VRK3-221ENST00000600284 SIRPGQ9P1W8 387 aa15.81■□□□□ 0.12
VRK3-221ENST00000600284 APPL1Q9UKG1 709 aa15.81■□□□□ 0.12
VRK3-221ENST00000600284 DNPEPQ9ULA0 475 aa15.81■□□□□ 0.12
VRK3-221ENST00000600284 RAI2Q9Y5P3 530 aa15.81■□□□□ 0.12
VRK3-221ENST00000600284 NBEAQ8NFP9 2946 aa15.81■□□□□ 0.12
VRK3-221ENST00000600284 PRSS38A1L453 326 aa15.8■□□□□ 0.12
VRK3-221ENST00000600284 NPIPB15A6NHN6 443 aaPredicted RBP15.8■□□□□ 0.12
VRK3-221ENST00000600284 ZNF30P17039 623 aa15.8■□□□□ 0.12
VRK3-221ENST00000600284 LHCGRP22888 699 aa15.8■□□□□ 0.12
VRK3-221ENST00000600284 ARHGAP25P42331 645 aa15.8■□□□□ 0.12
VRK3-221ENST00000600284 ITKQ08881 620 aa15.8■□□□□ 0.12
VRK3-221ENST00000600284 SOWAHCQ53LP3 525 aaPredicted RBP15.8■□□□□ 0.12
VRK3-221ENST00000600284 KCTD16Q68DU8 428 aa15.8■□□□□ 0.12
VRK3-221ENST00000600284 CRTC1Q6UUV9 634 aa15.8■□□□□ 0.12
VRK3-221ENST00000600284 NYAP1Q6ZVC0 841 aa15.8■□□□□ 0.12
VRK3-221ENST00000600284 TECPR1Q7Z6L1 1165 aa15.8■□□□□ 0.12
VRK3-221ENST00000600284 VSIG1Q86XK7 387 aa15.8■□□□□ 0.12
VRK3-221ENST00000600284 PELI3Q8N2H9 469 aa15.8■□□□□ 0.12
VRK3-221ENST00000600284 WDR36Q8NI36 951 aaKnown RBP15.8■□□□□ 0.12
VRK3-221ENST00000600284 ATXN7L3BQ96GX2 97 aa15.8■□□□□ 0.12
VRK3-221ENST00000600284 SLC46A1Q96NT5 459 aa15.8■□□□□ 0.12
VRK3-221ENST00000600284 PACSIN1Q9BY11 444 aa15.8■□□□□ 0.12
VRK3-221ENST00000600284 PRORYQ9H606 182 aa15.8■□□□□ 0.12
VRK3-221ENST00000600284 CYP4F12Q9HCS2 524 aa15.8■□□□□ 0.12
VRK3-221ENST00000600284 ASCL3Q9NQ33 180 aa15.8■□□□□ 0.12
VRK3-221ENST00000600284 MRPL40Q9NQ50 206 aaKnown RBP15.8■□□□□ 0.12
VRK3-221ENST00000600284 SATB2Q9UPW6 733 aa15.8■□□□□ 0.12
VRK3-221ENST00000600284 LRP4O75096 1905 aa15.79■□□□□ 0.12
VRK3-221ENST00000600284 ZNF487B1APH4 448 aa15.79■□□□□ 0.12
VRK3-221ENST00000600284 AKR1B10O60218 316 aa15.79■□□□□ 0.12
VRK3-221ENST00000600284 PDHA1P08559 390 aa15.79■□□□□ 0.12
VRK3-221ENST00000600284 CCNB1P14635 433 aa15.79■□□□□ 0.12
VRK3-221ENST00000600284 GLB1P16278 677 aa15.79■□□□□ 0.12
VRK3-221ENST00000600284 CA4P22748 312 aa15.79■□□□□ 0.12
VRK3-221ENST00000600284 KDELR1P24390 212 aa15.79■□□□□ 0.12
VRK3-221ENST00000600284 RBMS1P29558 406 aaKnown RBP15.79■□□□□ 0.12
VRK3-221ENST00000600284 GJC1P36383 396 aa15.79■□□□□ 0.12
VRK3-221ENST00000600284 ETV3P41162 512 aa15.79■□□□□ 0.12
VRK3-221ENST00000600284 TAS2R40P59535 323 aa15.79■□□□□ 0.12
VRK3-221ENST00000600284 RPL26P61254 145 aaKnown RBP15.79■□□□□ 0.12
VRK3-221ENST00000600284 C3orf38Q5JPI3 329 aa15.79■□□□□ 0.12
VRK3-221ENST00000600284 DENND2CQ68D51 928 aa15.79■□□□□ 0.12
VRK3-221ENST00000600284 Q6ZVL8 140 aa15.79■□□□□ 0.12
VRK3-221ENST00000600284 HSD11B1LQ7Z5J1 315 aa15.79■□□□□ 0.12
VRK3-221ENST00000600284 HEATR4Q86WZ0 1026 aa15.79■□□□□ 0.12
VRK3-221ENST00000600284 VSTM4Q8IW00 320 aa15.79■□□□□ 0.12
VRK3-221ENST00000600284 SPACA3Q8IXA5 215 aa15.79■□□□□ 0.12
VRK3-221ENST00000600284 PQLC3Q8N755 202 aa15.79■□□□□ 0.12
VRK3-221ENST00000600284 FAM46DQ8NEK8 389 aa15.79■□□□□ 0.12
VRK3-221ENST00000600284 GPBAR1Q8TDU6 330 aa15.79■□□□□ 0.12
VRK3-221ENST00000600284 CCDC74AQ96AQ1 378 aa15.79■□□□□ 0.12
VRK3-221ENST00000600284 HDAC11Q96DB2 347 aa15.79■□□□□ 0.12
VRK3-221ENST00000600284 LIN37Q96GY3 246 aaPredicted RBP15.79■□□□□ 0.12
VRK3-221ENST00000600284 GFM1Q96RP9 751 aaKnown RBP15.79■□□□□ 0.12
VRK3-221ENST00000600284 LGMNQ99538 433 aa15.79■□□□□ 0.12
VRK3-221ENST00000600284 DPH1Q9BZG8 443 aa15.79■□□□□ 0.12
VRK3-221ENST00000600284 TMEM168Q9H0V1 697 aa15.79■□□□□ 0.12
VRK3-221ENST00000600284 ABHD10Q9NUJ1 306 aa15.79■□□□□ 0.12
VRK3-221ENST00000600284 RBM22Q9NW64 420 aaKnown RBP eCLIP15.79■□□□□ 0.12
VRK3-221ENST00000600284 TRNAU1APQ9NX07 287 aaKnown RBP15.79■□□□□ 0.12
VRK3-221ENST00000600284 RPL26L1Q9UNX3 145 aaKnown RBP15.79■□□□□ 0.12
VRK3-221ENST00000600284 RP1P56715 2156 aa15.79■□□□□ 0.12
VRK3-221ENST00000600284 CCDC187A0A096LP49 1063 aa15.78■□□□□ 0.12
VRK3-221ENST00000600284 A0A0J9YYE9 177 aa15.78■□□□□ 0.12
VRK3-221ENST00000600284 NUDT21O43809 227 aaKnown RBP15.78■□□□□ 0.12
VRK3-221ENST00000600284 NOBOXO60393 691 aa15.78■□□□□ 0.12
VRK3-221ENST00000600284 TRBC1P01850 177 aa15.78■□□□□ 0.12
VRK3-221ENST00000600284 CEACAM5P06731 702 aa15.78■□□□□ 0.12
VRK3-221ENST00000600284 PYGLP06737 847 aa15.78■□□□□ 0.12
VRK3-221ENST00000600284 HOXB3P14651 431 aaPredicted RBP15.78■□□□□ 0.12
VRK3-221ENST00000600284 PDX1P52945 283 aa15.78■□□□□ 0.12
VRK3-221ENST00000600284 CDK3Q00526 305 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms