RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 PHF19Q5T6S3 580 aa6.12□□□□□ -1.43
VRK3-220ENST00000600259 BORAQ6PGQ7 559 aa6.12□□□□□ -1.43
VRK3-220ENST00000600259 DPPA4Q7L190 304 aa6.12□□□□□ -1.43
VRK3-220ENST00000600259 TIPARPQ7Z3E1 657 aaKnown RBP6.12□□□□□ -1.43
VRK3-220ENST00000600259 PHF13Q86YI8 300 aaPredicted RBP6.12□□□□□ -1.43
VRK3-220ENST00000600259 ARFGAP1Q8N6T3 406 aa6.12□□□□□ -1.43
VRK3-220ENST00000600259 ZSCAN1Q8NBB4 408 aa6.12□□□□□ -1.43
VRK3-220ENST00000600259 MSANTD4Q8NCY6 345 aa6.12□□□□□ -1.43
VRK3-220ENST00000600259 ZDHHC1Q8WTX9 485 aa6.12□□□□□ -1.43
VRK3-220ENST00000600259 SLC45A3Q96JT2 553 aa6.12□□□□□ -1.43
VRK3-220ENST00000600259 CCDC74BQ96LY2 380 aa6.12□□□□□ -1.43
VRK3-220ENST00000600259 C11orf70Q9BRQ4 267 aa6.12□□□□□ -1.43
VRK3-220ENST00000600259 SAMSN1Q9NSI8 373 aaKnown RBP6.12□□□□□ -1.43
VRK3-220ENST00000600259 TRNAU1APQ9NX07 287 aaKnown RBP6.12□□□□□ -1.43
VRK3-220ENST00000600259 OCIAD1Q9NX40 245 aa6.12□□□□□ -1.43
VRK3-220ENST00000600259 TMEM9Q9P0T7 183 aa6.12□□□□□ -1.43
VRK3-220ENST00000600259 TAAR2Q9P1P5 351 aa6.12□□□□□ -1.43
VRK3-220ENST00000600259 PILRAQ9UKJ1 303 aa6.12□□□□□ -1.43
VRK3-220ENST00000600259 PLEKHM1Q9Y4G2 1056 aa6.12□□□□□ -1.43
VRK3-220ENST00000600259 PCDHB11Q9Y5F2 797 aa6.12□□□□□ -1.43
VRK3-220ENST00000600259 ITPR2Q14571 2701 aa6.12□□□□□ -1.43
VRK3-220ENST00000600259 MYO9AB2RTY4 2548 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 LOC101059948A0A1B0GTJ6 334 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 A8MX80 341 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 B4E171 279 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 TEX33O43247 280 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 DUX1O43812 170 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 CREB3O43889 395 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 GFPT2O94808 682 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 PEX11BO96011 259 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 NTRK1P04629 796 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 THRAP10827 490 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 MYCLP1P12525 358 aaPredicted RBP6.11□□□□□ -1.43
VRK3-220ENST00000600259 PRKCSHP14314 528 aaPredicted RBP6.11□□□□□ -1.43
VRK3-220ENST00000600259 GPD1P21695 349 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 KELP23276 732 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 TEAD1P28347 426 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 ERCC5P28715 1186 aaPredicted RBP6.11□□□□□ -1.43
VRK3-220ENST00000600259 SOX5P35711 763 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 ADCY8P40145 1251 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 TSPAN7P41732 249 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 POLD2P49005 469 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 KLK7P49862 253 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 PAPOLAP51003 745 aaKnown RBP6.11□□□□□ -1.43
VRK3-220ENST00000600259 NDST2P52849 883 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 CTBSQ01459 385 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 TRA2AQ13595 282 aaKnown RBP eCLIP6.11□□□□□ -1.43
VRK3-220ENST00000600259 PTPRRQ15256 657 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 CNGA3Q16281 694 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 CA9Q16790 459 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 CLEC16AQ2KHT3 1053 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 HSP90AA4PQ58FG1 418 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 TMEM164Q5U3C3 297 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 NKAIN2Q5VXU1 208 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 ERAP2Q6P179 960 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 SCYL2Q6P3W7 929 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 TMEM71Q6P5X7 295 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 TRIM72Q6ZMU5 477 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 ARHGAP36Q6ZRI8 547 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 RFLNAQ6ZTI6 216 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 CYP4V2Q6ZWL3 525 aaPredicted RBP6.11□□□□□ -1.43
VRK3-220ENST00000600259 MON1BQ7L1V2 547 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 ARHGAP22Q7Z5H3 698 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 TECPR1Q7Z6L1 1165 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 ZNF354CQ86Y25 554 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 TP53INP2Q8IXH6 220 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 CACNA2D3Q8IZS8 1091 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 C3orf20Q8ND61 904 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 OR4D9Q8NGE8 314 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 KIAA1524Q8TCG1 905 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 ART4Q93070 314 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 CELF6Q96J87 481 aaKnown RBP6.11□□□□□ -1.43
VRK3-220ENST00000600259 DDA1Q9BW61 102 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 WDR26Q9H7D7 661 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 ATP13A3Q9H7F0 1226 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 CATSPERBQ9H7T0 1116 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 CARS2Q9HA77 564 aaKnown RBP6.11□□□□□ -1.43
VRK3-220ENST00000600259 GPATCH2LQ9NWQ4 482 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 ADAM22Q9P0K1 906 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 B4GALT6Q9UBX8 382 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 ANAPC2Q9UJX6 822 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 SUFUQ9UMX1 484 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 SLC17A4Q9Y2C5 497 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 MAN2B2Q9Y2E5 1009 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 SIK3Q9Y2K2 1263 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 SPTBN1Q01082 2364 aaKnown RBP6.11□□□□□ -1.43
VRK3-220ENST00000600259 CENPEQ02224 2701 aa6.11□□□□□ -1.43
VRK3-220ENST00000600259 TTC24A2A3L6 582 aaPredicted RBP6.1□□□□□ -1.43
VRK3-220ENST00000600259 RHPN2P1A8MT19 583 aa6.1□□□□□ -1.43
VRK3-220ENST00000600259 K7EM74 188 aa6.1□□□□□ -1.43
VRK3-220ENST00000600259 PDE2AO00408 941 aaPredicted RBP6.1□□□□□ -1.43
VRK3-220ENST00000600259 CAPN5O15484 640 aaPredicted RBP6.1□□□□□ -1.43
VRK3-220ENST00000600259 FGF10O15520 208 aaPredicted RBP6.1□□□□□ -1.43
VRK3-220ENST00000600259 RAD1O60671 282 aa6.1□□□□□ -1.43
VRK3-220ENST00000600259 PALMO75781 387 aa6.1□□□□□ -1.43
VRK3-220ENST00000600259 HEXIM1O94992 359 aaKnown RBP6.1□□□□□ -1.43
VRK3-220ENST00000600259 EML2O95834 649 aa6.1□□□□□ -1.43
VRK3-220ENST00000600259 SOD1P00441 154 aa6.1□□□□□ -1.43
VRK3-220ENST00000600259 IVLP07476 585 aa6.1□□□□□ -1.43
VRK3-220ENST00000600259 ELFN1P0C7U0 828 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms