RNA–Protein interactions for RNA: ENST00000599335.5

SUPT5H-216, Transcript of SPT5 homolog, DSIF elongation factor subunit, human

TSL 2

Gene SUPT5H, Length 3,796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT5H-216	ENST00000599335	DDX28	Q9NUL7	540 aa	Known RBP	11.37	□□□□□ -0.59
SUPT5H-216	ENST00000599335	ARMC1	Q9NVT9	282 aa		11.37	□□□□□ -0.59
SUPT5H-216	ENST00000599335	ZNF624	Q9P2J8	865 aa	Predicted RBP	11.37	□□□□□ -0.59
SUPT5H-216	ENST00000599335	XIRP2	A4UGR9	3374 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	CIT	O14578	2027 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335		H3BRJ5	948 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	EEF2K	O00418	725 aa	Known RBP	11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	MDM4	O15151	490 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	CHAD	O15335	359 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	GUCA1C	O95843	209 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	GALT	P07902	379 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	MATK	P42679	507 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	MLLT6	P55198	1093 aa	Predicted RBP	11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	THOC5	Q13769	683 aa	Known RBP	11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	VEPH1	Q14D04	833 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	USP41	Q3LFD5	358 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	PKDCC	Q504Y2	493 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	SLC45A4	Q5BKX6	768 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	RARS2	Q5T160	578 aa	Known RBP	11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	SYPL2	Q5VXT5	272 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	CRYBG2	Q8N1P7	616 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	ELMOD1	Q8N336	334 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	OR8K3	Q8NH51	312 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	NCSTN	Q92542	709 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	MOGAT1	Q96PD6	335 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	ZNF184	Q99676	751 aa	Predicted RBP	11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	DUSP16	Q9BY84	665 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	SIK2	Q9H0K1	926 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	DDIT4	Q9NX09	232 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	APOBEC2	Q9Y235	224 aa	Known RBP	11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	CKM	P06732	381 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	LAG3	P18627	525 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	ARHGDIA	P52565	204 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	SLC10A2	Q12908	348 aa	Predicted RBP	11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	TAZ	Q16635	292 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	AAGAB	Q6PD74	315 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	ARHGAP36	Q6ZRI8	547 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	HFE2	Q6ZVN8	426 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	RALGPS2	Q86X27	583 aa	Predicted RBP	11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	TDRP	Q86YL5	185 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	DNAAF3	Q8N9W5	541 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	SLC9A6	Q92581	669 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	ZFYVE19	Q96K21	471 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	C11orf84	Q9BUA3	381 aa	Predicted RBP	11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	TRPS1	Q9UHF7	1281 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	CDH22	Q9UJ99	828 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	MYBPHL	A2RUH7	354 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	TRMU	O75648	421 aa	Known RBP	11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	RFPL2	O75678	378 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	ZWINT	O95229	277 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	CLPTM1	O96005	669 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	IRS1	P35568	1242 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	CPA2	P48052	419 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	PCP4	P48539	62 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	STX1B	P61266	288 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	RPP38	P78345	283 aa	Known RBP	11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	PHC1	P78364	1004 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	TAGLN	Q01995	201 aa	Known RBP	11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	RHAG	Q02094	409 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	MAPRE1	Q15691	268 aa	Known RBP	11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	RAB30	Q15771	203 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	PHKG1	Q16816	387 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335		Q6ZNX1	250 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	COLGALT1	Q8NBJ5	622 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	RNF139	Q8WU17	664 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	HTR3C	Q8WXA8	447 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	SLC9A7	Q96T83	725 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	RGS18	Q9NS28	235 aa		11.36	□□□□□ -0.59
SUPT5H-216	ENST00000599335	E2F8	A0AVK6	867 aa		11.35	□□□□□ -0.59
SUPT5H-216	ENST00000599335	CCDC78	A2IDD5	438 aa		11.35	□□□□□ -0.59
SUPT5H-216	ENST00000599335	XPO1	O14980	1071 aa	Known RBP	11.35	□□□□□ -0.59
SUPT5H-216	ENST00000599335	WFS1	O76024	890 aa		11.35	□□□□□ -0.59
SUPT5H-216	ENST00000599335	ADRM1	Q16186	407 aa		11.35	□□□□□ -0.59
SUPT5H-216	ENST00000599335	FAM26D	Q5JW98	314 aa		11.35	□□□□□ -0.59
SUPT5H-216	ENST00000599335	RWDD4	Q6NW29	188 aa	Known RBP	11.35	□□□□□ -0.59
SUPT5H-216	ENST00000599335	ADGRD1	Q6QNK2	874 aa		11.35	□□□□□ -0.59
SUPT5H-216	ENST00000599335	TAS1R1	Q7RTX1	841 aa		11.35	□□□□□ -0.59
SUPT5H-216	ENST00000599335	FANK1	Q8TC84	345 aa		11.35	□□□□□ -0.59
SUPT5H-216	ENST00000599335	LINC01599	Q8WXQ3	324 aa		11.35	□□□□□ -0.59
SUPT5H-216	ENST00000599335	FAM136A	Q96C01	138 aa		11.35	□□□□□ -0.59
SUPT5H-216	ENST00000599335	GRAMD1A	Q96CP6	724 aa		11.35	□□□□□ -0.59
SUPT5H-216	ENST00000599335	ATXN7L3B	Q96GX2	97 aa		11.35	□□□□□ -0.59
SUPT5H-216	ENST00000599335	GAL3ST1	Q99999	423 aa		11.35	□□□□□ -0.59
SUPT5H-216	ENST00000599335	WDR83	Q9BRX9	315 aa	Known RBP	11.35	□□□□□ -0.59
SUPT5H-216	ENST00000599335	TRIM15	Q9C019	465 aa		11.35	□□□□□ -0.59
SUPT5H-216	ENST00000599335	DTL	Q9NZJ0	730 aa		11.35	□□□□□ -0.59
SUPT5H-216	ENST00000599335	LAMP5	Q9UJQ1	280 aa		11.35	□□□□□ -0.59
SUPT5H-216	ENST00000599335	RNF112	Q9ULX5	631 aa		11.35	□□□□□ -0.59
SUPT5H-216	ENST00000599335	MGAM	O43451	1857 aa		11.35	□□□□□ -0.59
SUPT5H-216	ENST00000599335	GOLGA4	Q13439	2230 aa	Known RBP	11.35	□□□□□ -0.59
SUPT5H-216	ENST00000599335	MFSD11	O43934	449 aa		11.35	□□□□□ -0.59
SUPT5H-216	ENST00000599335	B4GALT3	O60512	393 aa		11.35	□□□□□ -0.59
SUPT5H-216	ENST00000599335	UGT1A9	O60656	530 aa		11.35	□□□□□ -0.59
SUPT5H-216	ENST00000599335	TBX10	O75333	385 aa		11.35	□□□□□ -0.59
SUPT5H-216	ENST00000599335	SRGAP2B	P0DMP2	458 aa		11.35	□□□□□ -0.59
SUPT5H-216	ENST00000599335	GLUD2	P49448	558 aa		11.35	□□□□□ -0.59
SUPT5H-216	ENST00000599335	TPI1	P60174	286 aa		11.35	□□□□□ -0.59
SUPT5H-216	ENST00000599335	KCNJ11	Q14654	390 aa		11.35	□□□□□ -0.59
SUPT5H-216	ENST00000599335	PCBP1	Q15365	356 aa	Known RBP eCLIP	11.35	□□□□□ -0.59	1e-6	■■□□□ 12.4
SUPT5H-216	ENST00000599335	CES3	Q6UWW8	571 aa		11.35	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms