RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 IL22RA1Q8N6P7 574 aa14.02□□□□□ -0.17
SHKBP1-218ENST00000598907 ARL10Q8N8L6 244 aa14.02□□□□□ -0.17
SHKBP1-218ENST00000598907 Q8N9G6 341 aaPredicted RBP14.02□□□□□ -0.17
SHKBP1-218ENST00000598907 PCDH19Q8TAB3 1148 aa14.02□□□□□ -0.17
SHKBP1-218ENST00000598907 BTN2A2Q8WVV5 523 aa14.02□□□□□ -0.17
SHKBP1-218ENST00000598907 ALG3Q92685 438 aa14.02□□□□□ -0.17
SHKBP1-218ENST00000598907 RNF34Q969K3 372 aa14.02□□□□□ -0.17
SHKBP1-218ENST00000598907 ABHD17AQ96GS6 310 aa14.02□□□□□ -0.17
SHKBP1-218ENST00000598907 C1orf74Q96LT6 269 aa14.02□□□□□ -0.17
SHKBP1-218ENST00000598907 C16orf45Q96MC5 204 aaPredicted RBP14.02□□□□□ -0.17
SHKBP1-218ENST00000598907 SLC17A9Q9BYT1 436 aa14.02□□□□□ -0.17
SHKBP1-218ENST00000598907 MAGEB5Q9BZ81 275 aa14.02□□□□□ -0.17
SHKBP1-218ENST00000598907 VPS4AQ9UN37 437 aa14.02□□□□□ -0.17
SHKBP1-218ENST00000598907 DOLKQ9UPQ8 538 aa14.02□□□□□ -0.17
SHKBP1-218ENST00000598907 SDK2Q58EX2 2172 aa14.02□□□□□ -0.17
SHKBP1-218ENST00000598907 C3orf70A6NLC5 250 aaPredicted RBP14.01□□□□□ -0.17
SHKBP1-218ENST00000598907 LMO7DNF2Z398 122 aa14.01□□□□□ -0.17
SHKBP1-218ENST00000598907 STMND1H3BQB6 276 aa14.01□□□□□ -0.17
SHKBP1-218ENST00000598907 KIF2AO00139 706 aaPredicted RBP14.01□□□□□ -0.17
SHKBP1-218ENST00000598907 RNF103O00237 685 aa14.01□□□□□ -0.17
SHKBP1-218ENST00000598907 FPGTO14772 594 aa14.01□□□□□ -0.17
SHKBP1-218ENST00000598907 APOEP02649 317 aa14.01□□□□□ -0.17
SHKBP1-218ENST00000598907 ATP1A1P05023 1023 aaKnown RBP14.01□□□□□ -0.17
SHKBP1-218ENST00000598907 CD82P27701 267 aa14.01□□□□□ -0.17
SHKBP1-218ENST00000598907 L1CAMP32004 1257 aa14.01□□□□□ -0.17
SHKBP1-218ENST00000598907 SSR1P43307 286 aaKnown RBP14.01□□□□□ -0.17
SHKBP1-218ENST00000598907 NRG1Q02297 640 aaPredicted RBP14.01□□□□□ -0.17
SHKBP1-218ENST00000598907 SULT2A1Q06520 285 aa14.01□□□□□ -0.17
SHKBP1-218ENST00000598907 KLRB1Q12918 225 aa14.01□□□□□ -0.17
SHKBP1-218ENST00000598907 RPS6KA1Q15418 735 aa14.01□□□□□ -0.17
SHKBP1-218ENST00000598907 DPYSL2Q16555 572 aa14.01□□□□□ -0.17
SHKBP1-218ENST00000598907 CA9Q16790 459 aa14.01□□□□□ -0.17
SHKBP1-218ENST00000598907 ACBD5Q5T8D3 534 aaPredicted RBP14.01□□□□□ -0.17
SHKBP1-218ENST00000598907 PAPD7Q5XG87 772 aaKnown RBP14.01□□□□□ -0.17
SHKBP1-218ENST00000598907 CAPRIN2Q6IMN6 1127 aaKnown RBP14.01□□□□□ -0.17
SHKBP1-218ENST00000598907 TMPRSS9Q7Z410 1059 aa14.01□□□□□ -0.17
SHKBP1-218ENST00000598907 ATP6V0D2Q8N8Y2 350 aa14.01□□□□□ -0.17
SHKBP1-218ENST00000598907 FAM174AQ8TBP5 190 aa14.01□□□□□ -0.17
SHKBP1-218ENST00000598907 NKD1Q969G9 470 aa14.01□□□□□ -0.17
SHKBP1-218ENST00000598907 BTN2A3PQ96KV6 586 aa14.01□□□□□ -0.17
SHKBP1-218ENST00000598907 CMKLR1Q99788 373 aa14.01□□□□□ -0.17
SHKBP1-218ENST00000598907 PRMT1Q99873 361 aaKnown RBP14.01□□□□□ -0.17
SHKBP1-218ENST00000598907 CLPBQ9H078 707 aa14.01□□□□□ -0.17
SHKBP1-218ENST00000598907 LRRN3Q9H3W5 708 aa14.01□□□□□ -0.17
SHKBP1-218ENST00000598907 ZWILCHQ9H900 591 aa14.01□□□□□ -0.17
SHKBP1-218ENST00000598907 DDX56Q9NY93 547 aaKnown RBP14.01□□□□□ -0.17
SHKBP1-218ENST00000598907 PNMA8BQ9ULN7 279 aaPredicted RBP14.01□□□□□ -0.17
SHKBP1-218ENST00000598907 AP4E1Q9UPM8 1137 aa14.01□□□□□ -0.17
SHKBP1-218ENST00000598907 TP53TG5Q9Y2B4 290 aa14.01□□□□□ -0.17
SHKBP1-218ENST00000598907 HS3ST3A1Q9Y663 406 aa14.01□□□□□ -0.17
SHKBP1-218ENST00000598907 CELSR2Q9HCU4 2923 aa14.01□□□□□ -0.17
SHKBP1-218ENST00000598907 ATP9BO43861 1147 aa14□□□□□ -0.17
SHKBP1-218ENST00000598907 PAGE1O75459 146 aa14□□□□□ -0.17
SHKBP1-218ENST00000598907 TSHRP16473 764 aa14□□□□□ -0.17
SHKBP1-218ENST00000598907 KDELR1P24390 212 aa14□□□□□ -0.17
SHKBP1-218ENST00000598907 THOP1P52888 689 aa14□□□□□ -0.17
SHKBP1-218ENST00000598907 RWDD2BP57060 319 aa14□□□□□ -0.17
SHKBP1-218ENST00000598907 TAZQ16635 292 aa14□□□□□ -0.17
SHKBP1-218ENST00000598907 SMTNL2Q2TAL5 461 aa14□□□□□ -0.17
SHKBP1-218ENST00000598907 FAXCQ5TGI0 409 aa14□□□□□ -0.17
SHKBP1-218ENST00000598907 TMEM164Q5U3C3 297 aa14□□□□□ -0.17
SHKBP1-218ENST00000598907 SYT10Q6XYQ8 523 aa14□□□□□ -0.17
SHKBP1-218ENST00000598907 ERN2Q76MJ5 926 aaKnown RBP14□□□□□ -0.17
SHKBP1-218ENST00000598907 VSIG1Q86XK7 387 aa14□□□□□ -0.17
SHKBP1-218ENST00000598907 CCNJLQ8IV13 435 aa14□□□□□ -0.17
SHKBP1-218ENST00000598907 ZNF683Q8IZ20 524 aa14□□□□□ -0.17
SHKBP1-218ENST00000598907 UBL4BQ8N7F7 174 aa14□□□□□ -0.17
SHKBP1-218ENST00000598907 EXD1Q8NHP7 514 aa14□□□□□ -0.17
SHKBP1-218ENST00000598907 RAPGEF5Q92565 580 aa14□□□□□ -0.17
SHKBP1-218ENST00000598907 PMEPA1Q969W9 287 aa14□□□□□ -0.17
SHKBP1-218ENST00000598907 NAPGQ99747 312 aaPredicted RBP14□□□□□ -0.17
SHKBP1-218ENST00000598907 SLC13A1Q9BZW2 595 aa14□□□□□ -0.17
SHKBP1-218ENST00000598907 GPATCH2LQ9NWQ4 482 aa14□□□□□ -0.17
SHKBP1-218ENST00000598907 SLC12A6Q9UHW9 1150 aa14□□□□□ -0.17
SHKBP1-218ENST00000598907 DNAI1Q9UI46 699 aa14□□□□□ -0.17
SHKBP1-218ENST00000598907 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14□□□□□ -0.17
SHKBP1-218ENST00000598907 HS3ST4Q9Y661 456 aa14□□□□□ -0.17
SHKBP1-218ENST00000598907 CRYBG3Q68DQ2 2970 aa14□□□□□ -0.17
SHKBP1-218ENST00000598907 TRPM6Q9BX84 2022 aa13.99□□□□□ -0.17
SHKBP1-218ENST00000598907 CTAGE9A4FU28 777 aa13.99□□□□□ -0.17
SHKBP1-218ENST00000598907 ZNF891A8MT65 544 aaPredicted RBP13.99□□□□□ -0.17
SHKBP1-218ENST00000598907 ZNF487B1APH4 448 aa13.99□□□□□ -0.17
SHKBP1-218ENST00000598907 DUX1O43812 170 aa13.99□□□□□ -0.17
SHKBP1-218ENST00000598907 CNTN5O94779 1100 aa13.99□□□□□ -0.17
SHKBP1-218ENST00000598907 PRKCGP05129 697 aa13.99□□□□□ -0.17
SHKBP1-218ENST00000598907 TNNT1P13805 278 aa13.99□□□□□ -0.17
SHKBP1-218ENST00000598907 TACR2P21452 398 aa13.99□□□□□ -0.17
SHKBP1-218ENST00000598907 IL4RP24394 825 aa13.99□□□□□ -0.17
SHKBP1-218ENST00000598907 CHRNA3P32297 505 aa13.99□□□□□ -0.17
SHKBP1-218ENST00000598907 RPS21P63220 83 aaKnown RBP13.99□□□□□ -0.17
SHKBP1-218ENST00000598907 CCDC15Q0P6D6 951 aa13.99□□□□□ -0.17
SHKBP1-218ENST00000598907 PDK2Q15119 407 aa13.99□□□□□ -0.17
SHKBP1-218ENST00000598907 C5orf22Q49AR2 442 aa13.99□□□□□ -0.17
SHKBP1-218ENST00000598907 EFHC2Q5JST6 749 aa13.99□□□□□ -0.17
SHKBP1-218ENST00000598907 MANEALQ5VSG8 457 aa13.99□□□□□ -0.17
SHKBP1-218ENST00000598907 TICAM1Q8IUC6 712 aa13.99□□□□□ -0.17
SHKBP1-218ENST00000598907 RCOR2Q8IZ40 523 aa13.99□□□□□ -0.17
SHKBP1-218ENST00000598907 PYROXD2Q8N2H3 581 aa13.99□□□□□ -0.17
SHKBP1-218ENST00000598907 CHST14Q8NCH0 376 aa13.99□□□□□ -0.17
SHKBP1-218ENST00000598907 HSPH1Q92598 858 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms