RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 CEP128Q6ZU80 1094 aa12.13□□□□□ -0.47
SHKBP1-213ENST00000597325 DSG4Q86SJ6 1040 aa12.13□□□□□ -0.47
SHKBP1-213ENST00000597325 PRPF39Q86UA1 669 aaKnown RBP12.13□□□□□ -0.47
SHKBP1-213ENST00000597325 ZNF366Q8N895 744 aa12.13□□□□□ -0.47
SHKBP1-213ENST00000597325 FRS2Q8WU20 508 aa12.13□□□□□ -0.47
SHKBP1-213ENST00000597325 OR8D1Q8WZ84 308 aa12.13□□□□□ -0.47
SHKBP1-213ENST00000597325 PRCCQ92733 491 aaPredicted RBP12.13□□□□□ -0.47
SHKBP1-213ENST00000597325 ART4Q93070 314 aa12.13□□□□□ -0.47
SHKBP1-213ENST00000597325 OXNAD1Q96HP4 312 aaPredicted RBP12.13□□□□□ -0.47
SHKBP1-213ENST00000597325 TBL1YQ9BQ87 522 aa12.13□□□□□ -0.47
SHKBP1-213ENST00000597325 GORASP1Q9BQQ3 440 aa12.13□□□□□ -0.47
SHKBP1-213ENST00000597325 HEPHQ9BQS7 1158 aa12.13□□□□□ -0.47
SHKBP1-213ENST00000597325 MLPHQ9BV36 600 aaPredicted RBP12.13□□□□□ -0.47
SHKBP1-213ENST00000597325 FICDQ9BVA6 458 aa12.13□□□□□ -0.47
SHKBP1-213ENST00000597325 FRMD8Q9BZ67 464 aaPredicted RBP12.13□□□□□ -0.47
SHKBP1-213ENST00000597325 TMEM245Q9H330 911 aa12.13□□□□□ -0.47
SHKBP1-213ENST00000597325 GRHL1Q9NZI5 618 aa12.13□□□□□ -0.47
SHKBP1-213ENST00000597325 UQCRHLA0A096LP55 91 aa12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 BHMG1C9JSJ3 638 aaPredicted RBP12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 GOLGA8MH3BSY2 632 aa12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 AP3B1O00203 1094 aa12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 ALOX15BO15296 676 aa12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 CTIFO43310 598 aaKnown RBP12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 SOCS5O75159 536 aa12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 ZNF821O75541 412 aaPredicted RBP12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 TMEM63AO94886 807 aa12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 KLF8O95600 359 aaPredicted RBP12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 UQCRHP07919 91 aa12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 MMP2P08253 660 aa12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 NTSR1P30989 418 aa12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 KIR2DL1P43626 348 aaPredicted RBP12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 CARSP49589 748 aaKnown RBP12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 CSRP3P50461 194 aa12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 ARL4CP56559 192 aa12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 ELAVL3Q14576 367 aaKnown RBP12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 MYLK3Q32MK0 819 aa12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 MAP9Q49MG5 647 aa12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 HSF5Q4G112 596 aaPredicted RBP12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 COLEC12Q5KU26 742 aa12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 EMC10Q5UCC4 262 aa12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 ANKRD22Q5VYY1 191 aa12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 KCTD11Q693B1 232 aa12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 WDR93Q6P2C0 686 aa12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 NCEH1Q6PIU2 408 aa12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 KDELC1Q6UW63 502 aa12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 DPY19L3Q6ZPD9 716 aa12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 RABEPKQ7Z6M1 372 aa12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 GALNT15Q8N3T1 639 aa12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 NAT8LQ8N9F0 302 aa12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 EIF1ADQ8N9N8 165 aaKnown RBP12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 DNAAF3Q8N9W5 541 aa12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 MCUQ8NE86 351 aa12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 OR2A12Q8NGT7 310 aa12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 FBXO25Q8TCJ0 367 aa12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 GRIN3AQ8TCU5 1115 aa12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 PDCD6IPQ8WUM4 868 aaKnown RBP12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 WBP1Q96G27 269 aa12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 FEM1CQ96JP0 617 aa12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 SPACA7Q96KW9 195 aa12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 FMO2Q99518 471 aa12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 OSBPL1AQ9BXW6 950 aa12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 ADGRE3Q9BY15 652 aa12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 PARD6BQ9BYG5 372 aa12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 FOXP3Q9BZS1 431 aa12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 XAB2Q9HCS7 855 aaKnown RBP12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 IL36AQ9UHA7 158 aa12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 MMP17Q9ULZ9 603 aa12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 NFU1Q9UMS0 254 aa12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 KNTC1P50748 2209 aa12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 NOTCH2Q04721 2471 aa12.12□□□□□ -0.47
SHKBP1-213ENST00000597325 FAM149AA5PLN7 773 aa12.11□□□□□ -0.47
SHKBP1-213ENST00000597325 WASH3PC4AMC7 463 aa12.11□□□□□ -0.47
SHKBP1-213ENST00000597325 SIN3BO75182 1162 aa12.11□□□□□ -0.47
SHKBP1-213ENST00000597325 ERLIN1O75477 346 aa12.11□□□□□ -0.47
SHKBP1-213ENST00000597325 SUN1O94901 812 aa12.11□□□□□ -0.47
SHKBP1-213ENST00000597325 PIGNO95427 931 aa12.11□□□□□ -0.47
SHKBP1-213ENST00000597325 PRNPP04156 253 aa12.11□□□□□ -0.47
SHKBP1-213ENST00000597325 SYPP08247 313 aa12.11□□□□□ -0.47
SHKBP1-213ENST00000597325 CHRM1P11229 460 aaPredicted RBP12.11□□□□□ -0.47
SHKBP1-213ENST00000597325 HOXB2P14652 356 aa12.11□□□□□ -0.47
SHKBP1-213ENST00000597325 HLA-DPA1P20036 260 aa12.11□□□□□ -0.47
SHKBP1-213ENST00000597325 WASP42768 502 aa12.11□□□□□ -0.47
SHKBP1-213ENST00000597325 EPHB1P54762 984 aa12.11□□□□□ -0.47
SHKBP1-213ENST00000597325 VSNL1P62760 191 aa12.11□□□□□ -0.47
SHKBP1-213ENST00000597325 CDK18Q07002 472 aa12.11□□□□□ -0.47
SHKBP1-213ENST00000597325 SPARCL1Q14515 664 aa12.11□□□□□ -0.47
SHKBP1-213ENST00000597325 NAA30Q147X3 362 aaPredicted RBP12.11□□□□□ -0.47
SHKBP1-213ENST00000597325 TRADDQ15628 312 aa12.11□□□□□ -0.47
SHKBP1-213ENST00000597325 HIF1AQ16665 826 aa12.11□□□□□ -0.47
SHKBP1-213ENST00000597325 DNAJC21Q5F1R6 531 aaKnown RBP12.11□□□□□ -0.47
SHKBP1-213ENST00000597325 EOGTQ5NDL2 527 aa12.11□□□□□ -0.47
SHKBP1-213ENST00000597325 ARMC12Q5T9G4 340 aa12.11□□□□□ -0.47
SHKBP1-213ENST00000597325 ZDHHC24Q6UX98 284 aa12.11□□□□□ -0.47
SHKBP1-213ENST00000597325 CENPUQ71F23 418 aa12.11□□□□□ -0.47
SHKBP1-213ENST00000597325 KDELC2Q7Z4H8 507 aa12.11□□□□□ -0.47
SHKBP1-213ENST00000597325 KLHDC8BQ8IXV7 354 aa12.11□□□□□ -0.47
SHKBP1-213ENST00000597325 PDIK1LQ8N165 341 aa12.11□□□□□ -0.47
SHKBP1-213ENST00000597325 ZCCHC9Q8N567 271 aaKnown RBP12.11□□□□□ -0.47
SHKBP1-213ENST00000597325 TXNDC5Q8NBS9 432 aaKnown RBP12.11□□□□□ -0.47
SHKBP1-213ENST00000597325 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms