RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 KRT10P13645 584 aa13.06□□□□□ -0.32
USE1-207ENST00000596136 TSHRP16473 764 aa13.06□□□□□ -0.32
USE1-207ENST00000596136 ZNF30P17039 623 aa13.06□□□□□ -0.32
USE1-207ENST00000596136 HNF1BP35680 557 aa13.06□□□□□ -0.32
USE1-207ENST00000596136 DUSP3P51452 185 aaPredicted RBP13.06□□□□□ -0.32
USE1-207ENST00000596136 SRP54P61011 504 aaKnown RBP13.06□□□□□ -0.32
USE1-207ENST00000596136 E2F1Q01094 437 aa13.06□□□□□ -0.32
USE1-207ENST00000596136 ADCY2Q08462 1091 aa13.06□□□□□ -0.32
USE1-207ENST00000596136 ACOX1Q15067 660 aa13.06□□□□□ -0.32
USE1-207ENST00000596136 PTPRRQ15256 657 aa13.06□□□□□ -0.32
USE1-207ENST00000596136 ODF2Q5BJF6 829 aa13.06□□□□□ -0.32
USE1-207ENST00000596136 PRRT3Q5FWE3 981 aa13.06□□□□□ -0.32
USE1-207ENST00000596136 FAXCQ5TGI0 409 aa13.06□□□□□ -0.32
USE1-207ENST00000596136 LVRNQ6Q4G3 990 aa13.06□□□□□ -0.32
USE1-207ENST00000596136 CRTC1Q6UUV9 634 aa13.06□□□□□ -0.32
USE1-207ENST00000596136 ENPP7Q6UWV6 458 aa13.06□□□□□ -0.32
USE1-207ENST00000596136 BZW1Q7L1Q6 419 aaKnown RBP13.06□□□□□ -0.32
USE1-207ENST00000596136 HSD11B1LQ7Z5J1 315 aa13.06□□□□□ -0.32
USE1-207ENST00000596136 TSPAN33Q86UF1 283 aa13.06□□□□□ -0.32
USE1-207ENST00000596136 RFX6Q8HWS3 928 aa13.06□□□□□ -0.32
USE1-207ENST00000596136 PELI3Q8N2H9 469 aa13.06□□□□□ -0.32
USE1-207ENST00000596136 FSTL5Q8N475 847 aaPredicted RBP13.06□□□□□ -0.32
USE1-207ENST00000596136 EXD1Q8NHP7 514 aa13.06□□□□□ -0.32
USE1-207ENST00000596136 LMX1AQ8TE12 382 aa13.06□□□□□ -0.32
USE1-207ENST00000596136 TADA1Q96BN2 335 aa13.06□□□□□ -0.32
USE1-207ENST00000596136 NUS1Q96E22 293 aa13.06□□□□□ -0.32
USE1-207ENST00000596136 LACRTQ9GZZ8 138 aa13.06□□□□□ -0.32
USE1-207ENST00000596136 DKK4Q9UBT3 224 aa13.06□□□□□ -0.32
USE1-207ENST00000596136 DNPEPQ9ULA0 475 aa13.06□□□□□ -0.32
USE1-207ENST00000596136 CHKBQ9Y259 395 aa13.06□□□□□ -0.32
USE1-207ENST00000596136 DUSP10Q9Y6W6 482 aa13.06□□□□□ -0.32
USE1-207ENST00000596136 APC2O95996 2303 aa13.06□□□□□ -0.32
USE1-207ENST00000596136 hCG_1818297A0A087WSY0 165 aa13.05□□□□□ -0.32
USE1-207ENST00000596136 TMEM202A6NGA9 273 aa13.05□□□□□ -0.32
USE1-207ENST00000596136 CAPN8A6NHC0 703 aa13.05□□□□□ -0.32
USE1-207ENST00000596136 YY2O15391 372 aa13.05□□□□□ -0.32
USE1-207ENST00000596136 CST8O60676 142 aa13.05□□□□□ -0.32
USE1-207ENST00000596136 RASGRP1O95267 797 aa13.05□□□□□ -0.32
USE1-207ENST00000596136 IPO7O95373 1038 aaKnown RBP13.05□□□□□ -0.32
USE1-207ENST00000596136 ALPIP09923 528 aa13.05□□□□□ -0.32
USE1-207ENST00000596136 TNNT1P13805 278 aa13.05□□□□□ -0.32
USE1-207ENST00000596136 CTPS1P17812 591 aa13.05□□□□□ -0.32
USE1-207ENST00000596136 TGM2P21980 687 aa13.05□□□□□ -0.32
USE1-207ENST00000596136 CA4P22748 312 aa13.05□□□□□ -0.32
USE1-207ENST00000596136 KELP23276 732 aa13.05□□□□□ -0.32
USE1-207ENST00000596136 ETV3P41162 512 aa13.05□□□□□ -0.32
USE1-207ENST00000596136 SKOR1P84550 965 aa13.05□□□□□ -0.32
USE1-207ENST00000596136 DAB2P98082 770 aa13.05□□□□□ -0.32
USE1-207ENST00000596136 INSM1Q01101 510 aaPredicted RBP13.05□□□□□ -0.32
USE1-207ENST00000596136 PTSQ03393 145 aa13.05□□□□□ -0.32
USE1-207ENST00000596136 AP1B1Q10567 949 aa13.05□□□□□ -0.32
USE1-207ENST00000596136 ARHGEF7Q14155 803 aa13.05□□□□□ -0.32
USE1-207ENST00000596136 PRKD1Q15139 912 aaPredicted RBP13.05□□□□□ -0.32
USE1-207ENST00000596136 SLC14A2Q15849 920 aa13.05□□□□□ -0.32
USE1-207ENST00000596136 PPP2R5EQ16537 467 aa13.05□□□□□ -0.32
USE1-207ENST00000596136 CDKN3Q16667 212 aa13.05□□□□□ -0.32
USE1-207ENST00000596136 CCDC157Q569K6 752 aa13.05□□□□□ -0.32
USE1-207ENST00000596136 TFDP3Q5H9I0 405 aa13.05□□□□□ -0.32
USE1-207ENST00000596136 C6orf132Q5T0Z8 1188 aa13.05□□□□□ -0.32
USE1-207ENST00000596136 Q6ZVL8 140 aa13.05□□□□□ -0.32
USE1-207ENST00000596136 ZNF765Q7L2R6 523 aa13.05□□□□□ -0.32
USE1-207ENST00000596136 DAAM2Q86T65 1068 aa13.05□□□□□ -0.32
USE1-207ENST00000596136 OR56A4Q8NGH8 313 aa13.05□□□□□ -0.32
USE1-207ENST00000596136 KRT35Q92764 455 aa13.05□□□□□ -0.32
USE1-207ENST00000596136 TSACCQ96A04 125 aaPredicted RBP13.05□□□□□ -0.32
USE1-207ENST00000596136 IMP4Q96G21 291 aaKnown RBP13.05□□□□□ -0.32
USE1-207ENST00000596136 SMIM14Q96QK8 99 aa13.05□□□□□ -0.32
USE1-207ENST00000596136 RBM15Q96T37 977 aaKnown RBP eCLIP13.05□□□□□ -0.32
USE1-207ENST00000596136 BAG1Q99933 345 aaPredicted RBP13.05□□□□□ -0.32
USE1-207ENST00000596136 LGR4Q9BXB1 951 aa13.05□□□□□ -0.32
USE1-207ENST00000596136 TEX101Q9BY14 249 aa13.05□□□□□ -0.32
USE1-207ENST00000596136 PCDH9Q9HC56 1237 aa13.05□□□□□ -0.32
USE1-207ENST00000596136 EVA1BQ9NVM1 165 aa13.05□□□□□ -0.32
USE1-207ENST00000596136 EFR3BQ9Y2G0 817 aa13.05□□□□□ -0.32
USE1-207ENST00000596136 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.05□□□□□ -0.32
USE1-207ENST00000596136 PCDHA3Q9Y5H8 950 aa13.05□□□□□ -0.32
USE1-207ENST00000596136 EME2A4GXA9 379 aaPredicted RBP13.04□□□□□ -0.32
USE1-207ENST00000596136 ANKRD66B4E2M5 251 aa13.04□□□□□ -0.32
USE1-207ENST00000596136 CACNB4O00305 520 aaPredicted RBP13.04□□□□□ -0.32
USE1-207ENST00000596136 PDE2AO00408 941 aaPredicted RBP13.04□□□□□ -0.32
USE1-207ENST00000596136 CTNNA1P35221 906 aaKnown RBP13.04□□□□□ -0.32
USE1-207ENST00000596136 CD86P42081 329 aa13.04□□□□□ -0.32
USE1-207ENST00000596136 MARCKSL1P49006 195 aa13.04□□□□□ -0.32
USE1-207ENST00000596136 VAV2P52735 878 aa13.04□□□□□ -0.32
USE1-207ENST00000596136 STC1P52823 247 aa13.04□□□□□ -0.32
USE1-207ENST00000596136 COPS2P61201 443 aa13.04□□□□□ -0.32
USE1-207ENST00000596136 DYNLT1P63172 113 aa13.04□□□□□ -0.32
USE1-207ENST00000596136 C1orf61Q13536 156 aa13.04□□□□□ -0.32
USE1-207ENST00000596136 ELOCQ15369 112 aa13.04□□□□□ -0.32
USE1-207ENST00000596136 DEFB133Q30KQ1 61 aa13.04□□□□□ -0.32
USE1-207ENST00000596136 TEX44Q53QW1 395 aa13.04□□□□□ -0.32
USE1-207ENST00000596136 CDCP2Q5VXM1 449 aa13.04□□□□□ -0.32
USE1-207ENST00000596136 LRRC66Q68CR7 880 aa13.04□□□□□ -0.32
USE1-207ENST00000596136 KCTD16Q68DU8 428 aa13.04□□□□□ -0.32
USE1-207ENST00000596136 NYAP1Q6ZVC0 841 aa13.04□□□□□ -0.32
USE1-207ENST00000596136 MARCH9Q86YJ5 346 aa13.04□□□□□ -0.32
USE1-207ENST00000596136 HID1Q8IV36 788 aa13.04□□□□□ -0.32
USE1-207ENST00000596136 PDCD7Q8N8D1 485 aaKnown RBP13.04□□□□□ -0.32
USE1-207ENST00000596136 DCBLD1Q8N8Z6 715 aa13.04□□□□□ -0.32
USE1-207ENST00000596136 LRRC57Q8N9N7 239 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms