RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 NPIPB15A6NHN6 443 aaPredicted RBP23.49■■□□□ 1.35
LSM4-204ENST00000594828 PSMD11O00231 422 aa23.49■■□□□ 1.35
LSM4-204ENST00000594828 TCEA3O75764 348 aa23.49■■□□□ 1.35
LSM4-204ENST00000594828 PDHA1P08559 390 aa23.49■■□□□ 1.35
LSM4-204ENST00000594828 KRT10P13645 584 aa23.49■■□□□ 1.35
LSM4-204ENST00000594828 CTPS1P17812 591 aa23.49■■□□□ 1.35
LSM4-204ENST00000594828 LHCGRP22888 699 aa23.49■■□□□ 1.35
LSM4-204ENST00000594828 CES1P23141 567 aa23.49■■□□□ 1.35
LSM4-204ENST00000594828 KDELR1P24390 212 aa23.49■■□□□ 1.35
LSM4-204ENST00000594828 ETV3P41162 512 aa23.49■■□□□ 1.35
LSM4-204ENST00000594828 ABCG1P45844 678 aa23.49■■□□□ 1.35
LSM4-204ENST00000594828 LSSP48449 732 aa23.49■■□□□ 1.35
LSM4-204ENST00000594828 GABREP78334 506 aa23.49■■□□□ 1.35
LSM4-204ENST00000594828 RBM44Q6ZP01 1051 aaKnown RBP23.49■■□□□ 1.35
LSM4-204ENST00000594828 HSD11B1LQ7Z5J1 315 aa23.49■■□□□ 1.35
LSM4-204ENST00000594828 TAF8Q7Z7C8 310 aa23.49■■□□□ 1.35
LSM4-204ENST00000594828 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.49■■□□□ 1.35
LSM4-204ENST00000594828 PQLC3Q8N755 202 aa23.49■■□□□ 1.35
LSM4-204ENST00000594828 KYQ8NBH2 561 aa23.49■■□□□ 1.35
LSM4-204ENST00000594828 WDR48Q8TAF3 677 aa23.49■■□□□ 1.35
LSM4-204ENST00000594828 PIH1D2Q8WWB5 315 aa23.49■■□□□ 1.35
LSM4-204ENST00000594828 FATE1Q969F0 183 aa23.49■■□□□ 1.35
LSM4-204ENST00000594828 GRAMD1AQ96CP6 724 aa23.49■■□□□ 1.35
LSM4-204ENST00000594828 DTD2Q96FN9 168 aa23.49■■□□□ 1.35
LSM4-204ENST00000594828 MCCC1Q96RQ3 725 aaPredicted RBP23.49■■□□□ 1.35
LSM4-204ENST00000594828 NHEJ1Q9H9Q4 299 aaPredicted RBP23.49■■□□□ 1.35
LSM4-204ENST00000594828 POLR1BQ9H9Y6 1135 aa23.49■■□□□ 1.35
LSM4-204ENST00000594828 CYP4F12Q9HCS2 524 aa23.49■■□□□ 1.35
LSM4-204ENST00000594828 HAUS2Q9NVX0 235 aa23.49■■□□□ 1.35
LSM4-204ENST00000594828 MOSPD1Q9UJG1 213 aa23.49■■□□□ 1.35
LSM4-204ENST00000594828 MFAP3LO75121 409 aa23.48■■□□□ 1.35
LSM4-204ENST00000594828 CCNB1P14635 433 aa23.48■■□□□ 1.35
LSM4-204ENST00000594828 MX2P20592 715 aa23.48■■□□□ 1.35
LSM4-204ENST00000594828 ITPKBP27987 946 aa23.48■■□□□ 1.35
LSM4-204ENST00000594828 GBE1Q04446 702 aa23.48■■□□□ 1.35
LSM4-204ENST00000594828 PTPRRQ15256 657 aa23.48■■□□□ 1.35
LSM4-204ENST00000594828 Q6ZVL8 140 aa23.48■■□□□ 1.35
LSM4-204ENST00000594828 TSPAN33Q86UF1 283 aa23.48■■□□□ 1.35
LSM4-204ENST00000594828 RAPGEF5Q92565 580 aa23.48■■□□□ 1.35
LSM4-204ENST00000594828 TMEM168Q9H0V1 697 aa23.48■■□□□ 1.35
LSM4-204ENST00000594828 PHPT1Q9NRX4 125 aaPredicted RBP23.48■■□□□ 1.35
LSM4-204ENST00000594828 SPTLC3Q9NUV7 552 aa23.48■■□□□ 1.35
LSM4-204ENST00000594828 AMACRQ9UHK6 382 aa23.48■■□□□ 1.35
LSM4-204ENST00000594828 TTLL3Q9Y4R7 772 aa23.48■■□□□ 1.35
LSM4-204ENST00000594828 LAMA5O15230 3695 aa23.48■■□□□ 1.35
LSM4-204ENST00000594828 FAM208BQ5VWN6 2430 aa23.48■■□□□ 1.35
LSM4-204ENST00000594828 LRP4O75096 1905 aa23.47■■□□□ 1.35
LSM4-204ENST00000594828 ASXL3Q9C0F0 2248 aa23.47■■□□□ 1.35
LSM4-204ENST00000594828 FZD6O60353 706 aa23.47■■□□□ 1.35
LSM4-204ENST00000594828 MYCLP1P12525 358 aaPredicted RBP23.47■■□□□ 1.35
LSM4-204ENST00000594828 ARHGAP25P42331 645 aa23.47■■□□□ 1.35
LSM4-204ENST00000594828 DSC2Q02487 901 aa23.47■■□□□ 1.35
LSM4-204ENST00000594828 SLC10A2Q12908 348 aaPredicted RBP23.47■■□□□ 1.35
LSM4-204ENST00000594828 ALG1LQ6GMV1 187 aa23.47■■□□□ 1.35
LSM4-204ENST00000594828 CCNYQ8ND76 341 aa23.47■■□□□ 1.35
LSM4-204ENST00000594828 FAM46DQ8NEK8 389 aa23.47■■□□□ 1.35
LSM4-204ENST00000594828 LRRN4Q8WUT4 740 aa23.47■■□□□ 1.35
LSM4-204ENST00000594828 ZNF578Q96N58 590 aaPredicted RBP23.47■■□□□ 1.35
LSM4-204ENST00000594828 RNF157Q96PX1 679 aa23.47■■□□□ 1.35
LSM4-204ENST00000594828 TEX101Q9BY14 249 aa23.47■■□□□ 1.35
LSM4-204ENST00000594828 ENTPD2Q9Y5L3 495 aa23.47■■□□□ 1.35
LSM4-204ENST00000594828 PRSS38A1L453 326 aa23.46■■□□□ 1.35
LSM4-204ENST00000594828 GOLGA6CA6NDK9 693 aa23.46■■□□□ 1.35
LSM4-204ENST00000594828 GOLGA6BA6NDN3 693 aa23.46■■□□□ 1.35
LSM4-204ENST00000594828 GOLGA6DP0CG33 693 aa23.46■■□□□ 1.35
LSM4-204ENST00000594828 SPIDRQ14159 915 aa23.46■■□□□ 1.35
LSM4-204ENST00000594828 HEATR4Q86WZ0 1026 aa23.46■■□□□ 1.35
LSM4-204ENST00000594828 RHOT2Q8IXI1 618 aa23.46■■□□□ 1.35
LSM4-204ENST00000594828 OR6C4Q8NGE1 309 aa23.46■■□□□ 1.35
LSM4-204ENST00000594828 CCDC74AQ96AQ1 378 aa23.46■■□□□ 1.35
LSM4-204ENST00000594828 ATXN7L3BQ96GX2 97 aa23.46■■□□□ 1.35
LSM4-204ENST00000594828 SYNDIG1Q9H7V2 258 aa23.46■■□□□ 1.35
LSM4-204ENST00000594828 GOLGA6AQ9NYA3 693 aa23.46■■□□□ 1.35
LSM4-204ENST00000594828 LRRD1A4D1F6 860 aa23.45■■□□□ 1.34
LSM4-204ENST00000594828 CASC3O15234 703 aaKnown RBP23.45■■□□□ 1.34
LSM4-204ENST00000594828 DXOO77932 396 aaKnown RBP23.45■■□□□ 1.34
LSM4-204ENST00000594828 EPHB1P54762 984 aa23.45■■□□□ 1.34
LSM4-204ENST00000594828 IHHQ14623 411 aa23.45■■□□□ 1.34
LSM4-204ENST00000594828 C3orf38Q5JPI3 329 aa23.45■■□□□ 1.34
LSM4-204ENST00000594828 RAET1GQ6H3X3 334 aa23.45■■□□□ 1.34
LSM4-204ENST00000594828 OGFOD3Q6PK18 319 aa23.45■■□□□ 1.34
LSM4-204ENST00000594828 TECPR1Q7Z6L1 1165 aa23.45■■□□□ 1.34
LSM4-204ENST00000594828 CCDC13Q8IYE1 715 aa23.45■■□□□ 1.34
LSM4-204ENST00000594828 GPR156Q8NFN8 814 aa23.45■■□□□ 1.34
LSM4-204ENST00000594828 CCL4L1Q8NHW4 92 aa23.45■■□□□ 1.34
LSM4-204ENST00000594828 ARRDC2Q8TBH0 407 aa23.45■■□□□ 1.34
LSM4-204ENST00000594828 HDAC11Q96DB2 347 aa23.45■■□□□ 1.34
LSM4-204ENST00000594828 CRELD1Q96HD1 420 aa23.45■■□□□ 1.34
LSM4-204ENST00000594828 ZNF830Q96NB3 372 aaPredicted RBP23.45■■□□□ 1.34
LSM4-204ENST00000594828 DTLQ9NZJ0 730 aa23.45■■□□□ 1.34
LSM4-204ENST00000594828 RABGEF1Q9UJ41 708 aa23.45■■□□□ 1.34
LSM4-204ENST00000594828 SATB2Q9UPW6 733 aa23.45■■□□□ 1.34
LSM4-204ENST00000594828 CHKBQ9Y259 395 aa23.45■■□□□ 1.34
LSM4-204ENST00000594828 A0A0J9YYE9 177 aa23.44■■□□□ 1.34
LSM4-204ENST00000594828 A0A0U1RQS6 177 aa23.44■■□□□ 1.34
LSM4-204ENST00000594828 NTN3O00634 580 aaPredicted RBP23.44■■□□□ 1.34
LSM4-204ENST00000594828 MTA2O94776 668 aa23.44■■□□□ 1.34
LSM4-204ENST00000594828 TRBC1P01850 177 aa23.44■■□□□ 1.34
LSM4-204ENST00000594828 HLA-DQB2P05538 268 aa23.44■■□□□ 1.34
LSM4-204ENST00000594828 TEAD1P28347 426 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms