RNA–Protein interactions for RNA: ENST00000594814.5

LRIT3-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRIT3, Length 3,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-202ENST00000594814 HIF1AQ16665 826 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 LRIT3Q3SXY7 679 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 PIK3R6Q5UE93 754 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 AGAP6Q5VW22 663 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 ITPRIPL1Q6GPH6 555 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 TRAF7Q6Q0C0 670 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 ZNF782Q6ZMW2 699 aaPredicted RBP4.39□□□□□ -1.71
LRIT3-202ENST00000594814 SLC9B2Q86UD5 537 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 SIX5Q8N196 739 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 FBXO15Q8NCQ5 510 aaPredicted RBP4.39□□□□□ -1.71
LRIT3-202ENST00000594814 REPS2Q8NFH8 660 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 GOT1L1Q8NHS2 421 aaPredicted RBP4.39□□□□□ -1.71
LRIT3-202ENST00000594814 PYDC1Q8WXC3 89 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 CRYGNQ8WXF5 182 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 CLEC4DQ8WXI8 215 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 PTP4A1Q93096 173 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 MRPL38Q96DV4 380 aaKnown RBP4.39□□□□□ -1.71
LRIT3-202ENST00000594814 TOX2Q96NM4 488 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 AGAP4Q96P64 663 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 PAFAH2Q99487 392 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 TMEM79Q9BSE2 394 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 RNF38Q9H0F5 515 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 UPF3AQ9H1J1 476 aaKnown RBP4.39□□□□□ -1.71
LRIT3-202ENST00000594814 SLC6A15Q9H2J7 730 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 MMP27Q9H306 513 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 SMOC1Q9H4F8 434 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 BRD9Q9H8M2 597 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 SAYSD1Q9NPB0 183 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 GCNT4Q9P109 453 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 PHF11Q9UIL8 331 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 MKLN1Q9UL63 735 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 KIAA1024Q9UPX6 916 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 ZSWIM8A7E2V4 1837 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 ZBBXA8MT70 800 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 MEI4A8MW99 385 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 LOC110117498-PIK3R3F6TDL0 507 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 CACNB4O00305 520 aaPredicted RBP4.39□□□□□ -1.71
LRIT3-202ENST00000594814 SNPHO15079 494 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 NOS1APO75052 506 aaPredicted RBP4.39□□□□□ -1.71
LRIT3-202ENST00000594814 GLRA3O75311 464 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 SERPINI2O75830 405 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 UPK1BO75841 260 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 CDK14O94921 469 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 CSPG5O95196 566 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 NDST3O95803 873 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 RB1P06400 928 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 FCER1AP12319 257 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 EIF2AK2P19525 551 aaKnown RBP4.39□□□□□ -1.71
LRIT3-202ENST00000594814 CYP3A5P20815 502 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 DNAJA1P31689 397 aaKnown RBP4.39□□□□□ -1.71
LRIT3-202ENST00000594814 ACSL1P33121 698 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 CASP3P42574 277 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 ATP4BP51164 291 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 MAP3K7CLP57077 242 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 PRKCDQ05655 676 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 FADDQ13158 208 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 ITGADQ13349 1161 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 RAB39AQ14964 217 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 SF3B4Q15427 424 aaKnown RBP eCLIP4.39□□□□□ -1.71
LRIT3-202ENST00000594814 CYP2A13Q16696 494 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 SLC36A3Q495N2 470 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 SULT1C3Q6IMI6 304 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 WDR73Q6P4I2 378 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 DYMQ7RTS9 669 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 GALNT7Q86SF2 657 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 TTC7BQ86TV6 843 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 SYTL1Q8IYJ3 562 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 FBXO36Q8NEA4 188 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 GMCL1P1Q8NEA9 526 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 ZNF564Q8TBZ8 553 aaPredicted RBP4.39□□□□□ -1.71
LRIT3-202ENST00000594814 PIK3R3Q92569 461 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 HAS1Q92839 578 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 KISS1RQ969F8 398 aaPredicted RBP4.39□□□□□ -1.71
LRIT3-202ENST00000594814 ZNF566Q969W8 418 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 ZNF669Q96BR6 464 aaPredicted RBP4.39□□□□□ -1.71
LRIT3-202ENST00000594814 SGCZQ96LD1 299 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 PLIN2Q99541 437 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 SH2D3AQ9BRG2 576 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 TP63Q9H3D4 680 aaPredicted RBP4.39□□□□□ -1.71
LRIT3-202ENST00000594814 MRPL47Q9HD33 250 aaKnown RBP4.39□□□□□ -1.71
LRIT3-202ENST00000594814 EMC3Q9P0I2 261 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 DCDC2Q9UHG0 476 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 MAPRE3Q9UPY8 281 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 TCAF1Q9Y4C2 921 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 HSPE1-MOB4S4R3N1 261 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 PARP14Q460N5 1801 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 SYNJ2BP-COX16A0A087WUM0 186 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 LINC00862A6NCI5 91 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 WASH4PA8MWX3 477 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 FAM86B1E9PN63 330 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 H3BMM5 538 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 STX7O15400 261 aaKnown RBP4.39□□□□□ -1.71
LRIT3-202ENST00000594814 HTRA2O43464 458 aaPredicted RBP4.39□□□□□ -1.71
LRIT3-202ENST00000594814 UGT2B11O75310 529 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 GABARAPO95166 117 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 ERBB2P04626 1255 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 GPIP06744 558 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 ASGR1P07306 291 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 INHBAP08476 426 aa4.39□□□□□ -1.71
LRIT3-202ENST00000594814 FAM86B2P0C5J1 330 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms