RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-218ENST00000593053 PDHA1P08559 390 aa13.1□□□□□ -0.31
PRKCSH-218ENST00000593053 HOXC4P09017 264 aaPredicted RBP13.1□□□□□ -0.31
PRKCSH-218ENST00000593053 MAN1A1P33908 653 aa13.1□□□□□ -0.31
PRKCSH-218ENST00000593053 DSC2Q02487 901 aa13.1□□□□□ -0.31
PRKCSH-218ENST00000593053 GBE1Q04446 702 aa13.1□□□□□ -0.31
PRKCSH-218ENST00000593053 ARHGEF7Q14155 803 aa13.1□□□□□ -0.31
PRKCSH-218ENST00000593053 IFI16Q16666 785 aaKnown RBP13.1□□□□□ -0.31
PRKCSH-218ENST00000593053 TIGD7Q6NT04 549 aaPredicted RBP13.1□□□□□ -0.31
PRKCSH-218ENST00000593053 LRRC69Q6ZNQ3 347 aa13.1□□□□□ -0.31
PRKCSH-218ENST00000593053 RBM44Q6ZP01 1051 aaKnown RBP13.1□□□□□ -0.31
PRKCSH-218ENST00000593053 Q6ZVL8 140 aa13.1□□□□□ -0.31
PRKCSH-218ENST00000593053 TAF8Q7Z7C8 310 aa13.1□□□□□ -0.31
PRKCSH-218ENST00000593053 TSPAN33Q86UF1 283 aa13.1□□□□□ -0.31
PRKCSH-218ENST00000593053 SDR16C5Q8N3Y7 309 aa13.1□□□□□ -0.31
PRKCSH-218ENST00000593053 PQLC3Q8N755 202 aa13.1□□□□□ -0.31
PRKCSH-218ENST00000593053 SLC35G2Q8TBE7 412 aa13.1□□□□□ -0.31
PRKCSH-218ENST00000593053 PIH1D2Q8WWB5 315 aa13.1□□□□□ -0.31
PRKCSH-218ENST00000593053 RAPGEF5Q92565 580 aa13.1□□□□□ -0.31
PRKCSH-218ENST00000593053 MAML1Q92585 1016 aa13.1□□□□□ -0.31
PRKCSH-218ENST00000593053 FAF2Q96CS3 445 aa13.1□□□□□ -0.31
PRKCSH-218ENST00000593053 DTD2Q96FN9 168 aa13.1□□□□□ -0.31
PRKCSH-218ENST00000593053 SCRN2Q96FV2 425 aa13.1□□□□□ -0.31
PRKCSH-218ENST00000593053 ATXN7L3BQ96GX2 97 aa13.1□□□□□ -0.31
PRKCSH-218ENST00000593053 CCDC42Q96M95 316 aa13.1□□□□□ -0.31
PRKCSH-218ENST00000593053 MCCC1Q96RQ3 725 aaPredicted RBP13.1□□□□□ -0.31
PRKCSH-218ENST00000593053 POLR1BQ9H9Y6 1135 aa13.1□□□□□ -0.31
PRKCSH-218ENST00000593053 CYP4F12Q9HCS2 524 aa13.1□□□□□ -0.31
PRKCSH-218ENST00000593053 RBM22Q9NW64 420 aaKnown RBP eCLIP13.1□□□□□ -0.31
PRKCSH-218ENST00000593053 URB1O60287 2271 aaKnown RBP13.09□□□□□ -0.31
PRKCSH-218ENST00000593053 LRRD1A4D1F6 860 aa13.09□□□□□ -0.31
PRKCSH-218ENST00000593053 GOLGA6CA6NDK9 693 aa13.09□□□□□ -0.31
PRKCSH-218ENST00000593053 GOLGA6BA6NDN3 693 aa13.09□□□□□ -0.31
PRKCSH-218ENST00000593053 PDE2AO00408 941 aaPredicted RBP13.09□□□□□ -0.31
PRKCSH-218ENST00000593053 FZD6O60353 706 aa13.09□□□□□ -0.31
PRKCSH-218ENST00000593053 GOLGA6DP0CG33 693 aa13.09□□□□□ -0.31
PRKCSH-218ENST00000593053 MYCLP1P12525 358 aaPredicted RBP13.09□□□□□ -0.31
PRKCSH-218ENST00000593053 CCNB1P14635 433 aa13.09□□□□□ -0.31
PRKCSH-218ENST00000593053 HOXB3P14651 431 aaPredicted RBP13.09□□□□□ -0.31
PRKCSH-218ENST00000593053 MX2P20592 715 aa13.09□□□□□ -0.31
PRKCSH-218ENST00000593053 KDELR1P24390 212 aa13.09□□□□□ -0.31
PRKCSH-218ENST00000593053 CCNCP24863 283 aa13.09□□□□□ -0.31
PRKCSH-218ENST00000593053 LSSP48449 732 aa13.09□□□□□ -0.31
PRKCSH-218ENST00000593053 SLC10A2Q12908 348 aaPredicted RBP13.09□□□□□ -0.31
PRKCSH-218ENST00000593053 IHHQ14623 411 aa13.09□□□□□ -0.31
PRKCSH-218ENST00000593053 HEATR4Q86WZ0 1026 aa13.09□□□□□ -0.31
PRKCSH-218ENST00000593053 CBARPQ8N350 705 aaPredicted RBP13.09□□□□□ -0.31
PRKCSH-218ENST00000593053 CCNYQ8ND76 341 aa13.09□□□□□ -0.31
PRKCSH-218ENST00000593053 WDR48Q8TAF3 677 aa13.09□□□□□ -0.31
PRKCSH-218ENST00000593053 FATE1Q969F0 183 aa13.09□□□□□ -0.31
PRKCSH-218ENST00000593053 CCDC74AQ96AQ1 378 aa13.09□□□□□ -0.31
PRKCSH-218ENST00000593053 TSGA13Q96PP4 275 aa13.09□□□□□ -0.31
PRKCSH-218ENST00000593053 SMIM14Q96QK8 99 aa13.09□□□□□ -0.31
PRKCSH-218ENST00000593053 TMEM168Q9H0V1 697 aa13.09□□□□□ -0.31
PRKCSH-218ENST00000593053 SUDS3Q9H7L9 328 aaPredicted RBP13.09□□□□□ -0.31
PRKCSH-218ENST00000593053 NHEJ1Q9H9Q4 299 aaPredicted RBP13.09□□□□□ -0.31
PRKCSH-218ENST00000593053 PHPT1Q9NRX4 125 aaPredicted RBP13.09□□□□□ -0.31
PRKCSH-218ENST00000593053 KCTD5Q9NXV2 234 aa13.09□□□□□ -0.31
PRKCSH-218ENST00000593053 GOLGA6AQ9NYA3 693 aa13.09□□□□□ -0.31
PRKCSH-218ENST00000593053 DTLQ9NZJ0 730 aa13.09□□□□□ -0.31
PRKCSH-218ENST00000593053 RABGEF1Q9UJ41 708 aa13.09□□□□□ -0.31
PRKCSH-218ENST00000593053 PPIL1Q9Y3C6 166 aa13.09□□□□□ -0.31
PRKCSH-218ENST00000593053 PRSS38A1L453 326 aa13.08□□□□□ -0.32
PRKCSH-218ENST00000593053 PSMD11O00231 422 aa13.08□□□□□ -0.32
PRKCSH-218ENST00000593053 TCEA3O75764 348 aa13.08□□□□□ -0.32
PRKCSH-218ENST00000593053 KRT10P13645 584 aa13.08□□□□□ -0.32
PRKCSH-218ENST00000593053 EPHB1P54762 984 aa13.08□□□□□ -0.32
PRKCSH-218ENST00000593053 CCDC173Q0VFZ6 552 aa13.08□□□□□ -0.32
PRKCSH-218ENST00000593053 SPIDRQ14159 915 aa13.08□□□□□ -0.32
PRKCSH-218ENST00000593053 C3orf38Q5JPI3 329 aa13.08□□□□□ -0.32
PRKCSH-218ENST00000593053 LRRC66Q68CR7 880 aa13.08□□□□□ -0.32
PRKCSH-218ENST00000593053 ALG1LQ6GMV1 187 aa13.08□□□□□ -0.32
PRKCSH-218ENST00000593053 RAET1GQ6H3X3 334 aa13.08□□□□□ -0.32
PRKCSH-218ENST00000593053 RFLNAQ6ZTI6 216 aa13.08□□□□□ -0.32
PRKCSH-218ENST00000593053 LSMEM2Q8N112 164 aa13.08□□□□□ -0.32
PRKCSH-218ENST00000593053 NDUFAF2Q8N183 169 aa13.08□□□□□ -0.32
PRKCSH-218ENST00000593053 FAM46DQ8NEK8 389 aa13.08□□□□□ -0.32
PRKCSH-218ENST00000593053 CCL4L1Q8NHW4 92 aa13.08□□□□□ -0.32
PRKCSH-218ENST00000593053 ARRDC2Q8TBH0 407 aa13.08□□□□□ -0.32
PRKCSH-218ENST00000593053 GRAMD1AQ96CP6 724 aa13.08□□□□□ -0.32
PRKCSH-218ENST00000593053 NAF1Q96HR8 494 aaKnown RBP13.08□□□□□ -0.32
PRKCSH-218ENST00000593053 ZNF830Q96NB3 372 aaPredicted RBP13.08□□□□□ -0.32
PRKCSH-218ENST00000593053 RNF157Q96PX1 679 aa13.08□□□□□ -0.32
PRKCSH-218ENST00000593053 TEX101Q9BY14 249 aa13.08□□□□□ -0.32
PRKCSH-218ENST00000593053 CARS2Q9HA77 564 aaKnown RBP13.08□□□□□ -0.32
PRKCSH-218ENST00000593053 HAUS2Q9NVX0 235 aa13.08□□□□□ -0.32
PRKCSH-218ENST00000593053 SATB2Q9UPW6 733 aa13.08□□□□□ -0.32
PRKCSH-218ENST00000593053 CHKBQ9Y259 395 aa13.08□□□□□ -0.32
PRKCSH-218ENST00000593053 ENTPD2Q9Y5L3 495 aa13.08□□□□□ -0.32
PRKCSH-218ENST00000593053 CACNA1GO43497 2377 aa13.08□□□□□ -0.32
PRKCSH-218ENST00000593053 A0A0J9YYE9 177 aa13.07□□□□□ -0.32
PRKCSH-218ENST00000593053 A0A1W2PNU3 283 aaPredicted RBP13.07□□□□□ -0.32
PRKCSH-218ENST00000593053 B4DGG1 531 aa13.07□□□□□ -0.32
PRKCSH-218ENST00000593053 NTN3O00634 580 aaPredicted RBP13.07□□□□□ -0.32
PRKCSH-218ENST00000593053 DXOO77932 396 aaKnown RBP13.07□□□□□ -0.32
PRKCSH-218ENST00000593053 TRBC1P01850 177 aa13.07□□□□□ -0.32
PRKCSH-218ENST00000593053 HLA-DQB2P05538 268 aa13.07□□□□□ -0.32
PRKCSH-218ENST00000593053 CEACAM5P06731 702 aa13.07□□□□□ -0.32
PRKCSH-218ENST00000593053 CES1P23141 567 aa13.07□□□□□ -0.32
PRKCSH-218ENST00000593053 CCL7P80098 99 aa13.07□□□□□ -0.32
PRKCSH-218ENST00000593053 CDK3Q00526 305 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms