RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 TRMT1Q9NXH9 659 aaKnown RBP15.33■□□□□ 0.04
TRIM47-206ENST00000592942 FAM153AQ9UHL3 310 aa15.33■□□□□ 0.04
TRIM47-206ENST00000592942 BTBD3Q9Y2F9 522 aa15.33■□□□□ 0.04
TRIM47-206ENST00000592942 EPG5Q9HCE0 2579 aa15.32■□□□□ 0.04
TRIM47-206ENST00000592942 NCOR2Q9Y618 2525 aa15.32■□□□□ 0.04
TRIM47-206ENST00000592942 GOLGA6L9A6NEM1 432 aa15.32■□□□□ 0.04
TRIM47-206ENST00000592942 C5orf60A6NFR6 353 aa15.32■□□□□ 0.04
TRIM47-206ENST00000592942 CAPN8A6NHC0 703 aa15.32■□□□□ 0.04
TRIM47-206ENST00000592942 F5H423 210 aaPredicted RBP15.32■□□□□ 0.04
TRIM47-206ENST00000592942 K7ESM1 405 aa15.32■□□□□ 0.04
TRIM47-206ENST00000592942 PSMD11O00231 422 aa15.32■□□□□ 0.04
TRIM47-206ENST00000592942 PMPCBO75439 489 aa15.32■□□□□ 0.04
TRIM47-206ENST00000592942 C1SP09871 688 aa15.32■□□□□ 0.04
TRIM47-206ENST00000592942 ATXN1LP0C7T5 689 aaKnown RBP15.32■□□□□ 0.04
TRIM47-206ENST00000592942 ETV3P41162 512 aa15.32■□□□□ 0.04
TRIM47-206ENST00000592942 EPHB1P54762 984 aa15.32■□□□□ 0.04
TRIM47-206ENST00000592942 GDF10P55107 478 aa15.32■□□□□ 0.04
TRIM47-206ENST00000592942 WNT3AP56704 352 aa15.32■□□□□ 0.04
TRIM47-206ENST00000592942 GALNT3Q14435 633 aa15.32■□□□□ 0.04
TRIM47-206ENST00000592942 OASLQ15646 514 aaKnown RBP15.32■□□□□ 0.04
TRIM47-206ENST00000592942 PCSK7Q16549 785 aa15.32■□□□□ 0.04
TRIM47-206ENST00000592942 ZNF542PQ5EBM4 170 aa15.32■□□□□ 0.04
TRIM47-206ENST00000592942 GATAD2AQ86YP4 633 aa15.32■□□□□ 0.04
TRIM47-206ENST00000592942 KLHDC8BQ8IXV7 354 aa15.32■□□□□ 0.04
TRIM47-206ENST00000592942 NDUFAF2Q8N183 169 aa15.32■□□□□ 0.04
TRIM47-206ENST00000592942 SLC25A45Q8N413 288 aa15.32■□□□□ 0.04
TRIM47-206ENST00000592942 DEFB124Q8NES8 71 aa15.32■□□□□ 0.04
TRIM47-206ENST00000592942 CCDC110Q8TBZ0 833 aa15.32■□□□□ 0.04
TRIM47-206ENST00000592942 ATG4AQ8WYN0 398 aa15.32■□□□□ 0.04
TRIM47-206ENST00000592942 DTD2Q96FN9 168 aa15.32■□□□□ 0.04
TRIM47-206ENST00000592942 IFT43Q96FT9 208 aa15.32■□□□□ 0.04
TRIM47-206ENST00000592942 WDR24Q96S15 920 aa15.32■□□□□ 0.04
TRIM47-206ENST00000592942 APOOQ9BUR5 198 aa15.32■□□□□ 0.04
TRIM47-206ENST00000592942 GBA3Q9H227 469 aa15.32■□□□□ 0.04
TRIM47-206ENST00000592942 PYCARDQ9ULZ3 195 aa15.32■□□□□ 0.04
TRIM47-206ENST00000592942 ARID1BQ8NFD5 2236 aaPredicted RBP15.32■□□□□ 0.04
TRIM47-206ENST00000592942 CNOT1A5YKK6 2376 aaKnown RBP15.31■□□□□ 0.04
TRIM47-206ENST00000592942 TOR1BO14657 336 aa15.31■□□□□ 0.04
TRIM47-206ENST00000592942 ENC1O14682 589 aa15.31■□□□□ 0.04
TRIM47-206ENST00000592942 ZSCAN12O43309 604 aa15.31■□□□□ 0.04
TRIM47-206ENST00000592942 NDST3O95803 873 aa15.31■□□□□ 0.04
TRIM47-206ENST00000592942 EPOP01588 193 aa15.31■□□□□ 0.04
TRIM47-206ENST00000592942 GIMD1P0DJR0 217 aa15.31■□□□□ 0.04
TRIM47-206ENST00000592942 CEACAM1P13688 526 aa15.31■□□□□ 0.04
TRIM47-206ENST00000592942 CA4P22748 312 aa15.31■□□□□ 0.04
TRIM47-206ENST00000592942 NFKBIAP25963 317 aa15.31■□□□□ 0.04
TRIM47-206ENST00000592942 EPHA8P29322 1005 aaPredicted RBP15.31■□□□□ 0.04
TRIM47-206ENST00000592942 CXCR5P32302 372 aa15.31■□□□□ 0.04
TRIM47-206ENST00000592942 CCT8P50990 548 aa15.31■□□□□ 0.04
TRIM47-206ENST00000592942 STC1P52823 247 aa15.31■□□□□ 0.04
TRIM47-206ENST00000592942 MTM1Q13496 603 aa15.31■□□□□ 0.04
TRIM47-206ENST00000592942 PDE1CQ14123 709 aaPredicted RBP15.31■□□□□ 0.04
TRIM47-206ENST00000592942 SEL1L2Q5TEA6 688 aa15.31■□□□□ 0.04
TRIM47-206ENST00000592942 DENND2CQ68D51 928 aa15.31■□□□□ 0.04
TRIM47-206ENST00000592942 ESRP1Q6NXG1 681 aaKnown RBP15.31■□□□□ 0.04
TRIM47-206ENST00000592942 PNCKQ6P2M8 343 aa15.31■□□□□ 0.04
TRIM47-206ENST00000592942 NLRP8Q86W28 1048 aa15.31■□□□□ 0.04
TRIM47-206ENST00000592942 OXR1Q8N573 874 aa15.31■□□□□ 0.04
TRIM47-206ENST00000592942 FAM71DQ8N9W8 422 aa15.31■□□□□ 0.04
TRIM47-206ENST00000592942 BAHD1Q8TBE0 780 aaPredicted RBP15.31■□□□□ 0.04
TRIM47-206ENST00000592942 SPATA13Q96N96 652 aa15.31■□□□□ 0.04
TRIM47-206ENST00000592942 TMEM121Q9BTD3 319 aa15.31■□□□□ 0.04
TRIM47-206ENST00000592942 ADGRE3Q9BY15 652 aa15.31■□□□□ 0.04
TRIM47-206ENST00000592942 ABCG8Q9H221 673 aa15.31■□□□□ 0.04
TRIM47-206ENST00000592942 PCOLCE2Q9UKZ9 415 aa15.31■□□□□ 0.04
TRIM47-206ENST00000592942 OR1A2Q9Y585 309 aa15.31■□□□□ 0.04
TRIM47-206ENST00000592942 TDRD6O60522 2096 aaKnown RBP15.31■□□□□ 0.04
TRIM47-206ENST00000592942 LIASO43766 372 aa15.3■□□□□ 0.04
TRIM47-206ENST00000592942 GCATO75600 419 aa15.3■□□□□ 0.04
TRIM47-206ENST00000592942 SOD1P00441 154 aa15.3■□□□□ 0.04
TRIM47-206ENST00000592942 CSF2P04141 144 aa15.3■□□□□ 0.04
TRIM47-206ENST00000592942 PCCBP05166 539 aa15.3■□□□□ 0.04
TRIM47-206ENST00000592942 HOXC4P09017 264 aaPredicted RBP15.3■□□□□ 0.04
TRIM47-206ENST00000592942 PIRTP0C851 137 aa15.3■□□□□ 0.04
TRIM47-206ENST00000592942 ZNF30P17039 623 aa15.3■□□□□ 0.04
TRIM47-206ENST00000592942 ADRA1AP35348 466 aa15.3■□□□□ 0.04
TRIM47-206ENST00000592942 CHRNA4P43681 627 aa15.3■□□□□ 0.04
TRIM47-206ENST00000592942 DPTQ07507 201 aa15.3■□□□□ 0.04
TRIM47-206ENST00000592942 MPP3Q13368 585 aa15.3■□□□□ 0.04
TRIM47-206ENST00000592942 MSLNQ13421 630 aaPredicted RBP15.3■□□□□ 0.04
TRIM47-206ENST00000592942 ARHGEF7Q14155 803 aa15.3■□□□□ 0.04
TRIM47-206ENST00000592942 PPM1JQ5JR12 505 aa15.3■□□□□ 0.04
TRIM47-206ENST00000592942 ZNF569Q5MCW4 686 aa15.3■□□□□ 0.04
TRIM47-206ENST00000592942 KCTD16Q68DU8 428 aa15.3■□□□□ 0.04
TRIM47-206ENST00000592942 RANBP10Q6VN20 620 aa15.3■□□□□ 0.04
TRIM47-206ENST00000592942 TMC3Q7Z5M5 1100 aa15.3■□□□□ 0.04
TRIM47-206ENST00000592942 NAXDQ8IW45 347 aa15.3■□□□□ 0.04
TRIM47-206ENST00000592942 RAVER1Q8IY67 606 aaKnown RBP15.3■□□□□ 0.04
TRIM47-206ENST00000592942 SLC35F6Q8N357 371 aa15.3■□□□□ 0.04
TRIM47-206ENST00000592942 C1orf54Q8WWF1 131 aa15.3■□□□□ 0.04
TRIM47-206ENST00000592942 SCAMP4Q969E2 229 aa15.3■□□□□ 0.04
TRIM47-206ENST00000592942 TRIM44Q96DX7 344 aaPredicted RBP15.3■□□□□ 0.04
TRIM47-206ENST00000592942 RTP4Q96DX8 246 aa15.3■□□□□ 0.04
TRIM47-206ENST00000592942 NUS1Q96E22 293 aa15.3■□□□□ 0.04
TRIM47-206ENST00000592942 LGR4Q9BXB1 951 aa15.3■□□□□ 0.04
TRIM47-206ENST00000592942 TCEAL2Q9H3H9 227 aaPredicted RBP15.3■□□□□ 0.04
TRIM47-206ENST00000592942 MAGEE1Q9HCI5 957 aa15.3■□□□□ 0.04
TRIM47-206ENST00000592942 UCKL1Q9NWZ5 548 aa15.3■□□□□ 0.04
TRIM47-206ENST00000592942 RSPH14Q9UHP6 348 aa15.3■□□□□ 0.04
TRIM47-206ENST00000592942 JRKLQ9Y4A0 524 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms