RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 TRIM23P36406 574 aa9.2□□□□□ -0.94
DNMT1-223ENST00000591239 ETV3P41162 512 aa9.2□□□□□ -0.94
DNMT1-223ENST00000591239 CETN2P41208 172 aa9.2□□□□□ -0.94
DNMT1-223ENST00000591239 PTSQ03393 145 aa9.2□□□□□ -0.94
DNMT1-223ENST00000591239 WASHC5Q12768 1159 aa9.2□□□□□ -0.94
DNMT1-223ENST00000591239 CCDC181Q5TID7 509 aa9.2□□□□□ -0.94
DNMT1-223ENST00000591239 ESRP1Q6NXG1 681 aaKnown RBP9.2□□□□□ -0.94
DNMT1-223ENST00000591239 AADACL2Q6P093 401 aa9.2□□□□□ -0.94
DNMT1-223ENST00000591239 PNCKQ6P2M8 343 aa9.2□□□□□ -0.94
DNMT1-223ENST00000591239 CRTC1Q6UUV9 634 aa9.2□□□□□ -0.94
DNMT1-223ENST00000591239 Q6ZVL8 140 aa9.2□□□□□ -0.94
DNMT1-223ENST00000591239 HSD11B1LQ7Z5J1 315 aa9.2□□□□□ -0.94
DNMT1-223ENST00000591239 CHCHD4Q8N4Q1 142 aa9.2□□□□□ -0.94
DNMT1-223ENST00000591239 ZNF548Q8NEK5 533 aaPredicted RBP9.2□□□□□ -0.94
DNMT1-223ENST00000591239 SPATA22Q8NHS9 363 aa9.2□□□□□ -0.94
DNMT1-223ENST00000591239 BTN2A2Q8WVV5 523 aa9.2□□□□□ -0.94
DNMT1-223ENST00000591239 TADA1Q96BN2 335 aa9.2□□□□□ -0.94
DNMT1-223ENST00000591239 NUS1Q96E22 293 aa9.2□□□□□ -0.94
DNMT1-223ENST00000591239 DTD2Q96FN9 168 aa9.2□□□□□ -0.94
DNMT1-223ENST00000591239 CNDP2Q96KP4 475 aaKnown RBP9.2□□□□□ -0.94
DNMT1-223ENST00000591239 TEKT5Q96M29 485 aa9.2□□□□□ -0.94
DNMT1-223ENST00000591239 QKIQ96PU8 341 aaKnown RBP eCLIP9.2□□□□□ -0.94
DNMT1-223ENST00000591239 SMIM14Q96QK8 99 aa9.2□□□□□ -0.94
DNMT1-223ENST00000591239 ADGRE3Q9BY15 652 aa9.2□□□□□ -0.94
DNMT1-223ENST00000591239 SLC13A1Q9BZW2 595 aa9.2□□□□□ -0.94
DNMT1-223ENST00000591239 TSGA10Q9BZW7 698 aa9.2□□□□□ -0.94
DNMT1-223ENST00000591239 GLOD4Q9HC38 313 aa9.2□□□□□ -0.94
DNMT1-223ENST00000591239 KCTD5Q9NXV2 234 aa9.2□□□□□ -0.94
DNMT1-223ENST00000591239 PNMA8BQ9ULN7 279 aaPredicted RBP9.2□□□□□ -0.94
DNMT1-223ENST00000591239 GUCA1BQ9UMX6 200 aa9.2□□□□□ -0.94
DNMT1-223ENST00000591239 PACSIN2Q9UNF0 486 aaPredicted RBP9.2□□□□□ -0.94
DNMT1-223ENST00000591239 CAPN6Q9Y6Q1 641 aa9.2□□□□□ -0.94
DNMT1-223ENST00000591239 TDRD6O60522 2096 aaKnown RBP9.2□□□□□ -0.94
DNMT1-223ENST00000591239 DMXL2Q8TDJ6 3036 aa9.2□□□□□ -0.94
DNMT1-223ENST00000591239 COL5A1P20908 1838 aaPredicted RBP9.19□□□□□ -0.94
DNMT1-223ENST00000591239 CAPN8A6NHC0 703 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 H7C0C1 242 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 K7ESM1 405 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 DDX3YO15523 660 aaKnown RBP9.19□□□□□ -0.94
DNMT1-223ENST00000591239 FFAR2O15552 330 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 AQP9O43315 295 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 SIGLEC6O43699 453 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 DKK1O94907 266 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 TJP3O95049 919 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 MT-CYBP00156 380 aaPredicted RBP9.19□□□□□ -0.94
DNMT1-223ENST00000591239 HOXC4P09017 264 aaPredicted RBP9.19□□□□□ -0.94
DNMT1-223ENST00000591239 GIMD1P0DJR0 217 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 ALPPL2P10696 532 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 ZNF30P17039 623 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 SPINK2P20155 84 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 CD68P34810 354 aaPredicted RBP9.19□□□□□ -0.94
DNMT1-223ENST00000591239 ATP5OP48047 213 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 OTUD4Q01804 1114 aaKnown RBP9.19□□□□□ -0.94
DNMT1-223ENST00000591239 PPARDQ03181 441 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 DNAJC3Q13217 504 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 ZNF211Q13398 564 aaPredicted RBP9.19□□□□□ -0.94
DNMT1-223ENST00000591239 XRCC4Q13426 336 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 NFATC4Q14934 902 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 NOMO1Q15155 1222 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 SLC14A2Q15849 920 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 QPCTQ16769 361 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 HS1BP3Q53T59 392 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 PRRT3Q5FWE3 981 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 FAXCQ5TGI0 409 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 LRRC66Q68CR7 880 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 ENPP7Q6UWV6 458 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 KDELC2Q7Z4H8 507 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 TECPR1Q7Z6L1 1165 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 RAB44Q7Z6P3 723 aaPredicted RBP9.19□□□□□ -0.94
DNMT1-223ENST00000591239 PHACTR4Q8IZ21 702 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 RBFAQ8N0V3 343 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 PELI3Q8N2H9 469 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 LPCAT1Q8NF37 534 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 OR4C6Q8NH72 309 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 ACTL9Q8TC94 416 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 LMX1AQ8TE12 382 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 HTR3CQ8WXA8 447 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 ADAMTS14Q8WXS8 1223 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 TSACCQ96A04 125 aaPredicted RBP9.19□□□□□ -0.94
DNMT1-223ENST00000591239 FUBP1Q96AE4 644 aaKnown RBP9.19□□□□□ -0.94
DNMT1-223ENST00000591239 HES6Q96HZ4 224 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 TRIB3Q96RU7 358 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 VAT1Q99536 393 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 MLPHQ9BV36 600 aaPredicted RBP9.19□□□□□ -0.94
DNMT1-223ENST00000591239 SCNM1Q9BWG6 230 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 TCEAL2Q9H3H9 227 aaPredicted RBP9.19□□□□□ -0.94
DNMT1-223ENST00000591239 WDR26Q9H7D7 661 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 GRPEL1Q9HAV7 217 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 NLGN3Q9NZ94 848 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 UBP1Q9NZI7 540 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 APOBEC3BQ9UH17 382 aaKnown RBP9.19□□□□□ -0.94
DNMT1-223ENST00000591239 DNPEPQ9ULA0 475 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 CSNK1G3Q9Y6M4 447 aa9.19□□□□□ -0.94
DNMT1-223ENST00000591239 C1orf232A0A0U1RR37 186 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 GOLGA6L3A6NEY3 463 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 TMEM202A6NGA9 273 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 CACNB4O00305 520 aaPredicted RBP9.18□□□□□ -0.94
DNMT1-223ENST00000591239 ZZEF1O43149 2961 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 PMPCBO75439 489 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 GCATO75600 419 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms