RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 LMX1AQ8TE12 382 aa22.36■■□□□ 1.17
MBD3-208ENST00000590830 TFB1MQ8WVM0 346 aaKnown RBP22.36■■□□□ 1.17
MBD3-208ENST00000590830 P3H4Q92791 437 aa22.36■■□□□ 1.17
MBD3-208ENST00000590830 TEKT5Q96M29 485 aa22.36■■□□□ 1.17
MBD3-208ENST00000590830 LGR4Q9BXB1 951 aa22.36■■□□□ 1.17
MBD3-208ENST00000590830 CLPBQ9H078 707 aa22.36■■□□□ 1.17
MBD3-208ENST00000590830 SLC25A51Q9H1U9 297 aa22.36■■□□□ 1.17
MBD3-208ENST00000590830 GLOD4Q9HC38 313 aa22.36■■□□□ 1.17
MBD3-208ENST00000590830 MSRB2Q9Y3D2 182 aa22.36■■□□□ 1.17
MBD3-208ENST00000590830 CSNK1G3Q9Y6M4 447 aa22.36■■□□□ 1.17
MBD3-208ENST00000590830 TPRP12270 2363 aaKnown RBP22.36■■□□□ 1.17
MBD3-208ENST00000590830 ACACBO00763 2458 aa22.36■■□□□ 1.17
MBD3-208ENST00000590830 TDRD6O60522 2096 aaKnown RBP22.35■■□□□ 1.17
MBD3-208ENST00000590830 LY6G6EA0A0G2JKS1 128 aa22.35■■□□□ 1.17
MBD3-208ENST00000590830 TMEM202A6NGA9 273 aa22.35■■□□□ 1.17
MBD3-208ENST00000590830 H3BM21 787 aa22.35■■□□□ 1.17
MBD3-208ENST00000590830 PSMD11O00231 422 aa22.35■■□□□ 1.17
MBD3-208ENST00000590830 AQP9O43315 295 aa22.35■■□□□ 1.17
MBD3-208ENST00000590830 HOXC4P09017 264 aaPredicted RBP22.35■■□□□ 1.17
MBD3-208ENST00000590830 PYGMP11217 842 aa22.35■■□□□ 1.17
MBD3-208ENST00000590830 CD68P34810 354 aaPredicted RBP22.35■■□□□ 1.17
MBD3-208ENST00000590830 EPHB1P54762 984 aa22.35■■□□□ 1.17
MBD3-208ENST00000590830 RPL26P61254 145 aaKnown RBP22.35■■□□□ 1.17
MBD3-208ENST00000590830 PPARDQ03181 441 aa22.35■■□□□ 1.17
MBD3-208ENST00000590830 FAXCQ5TGI0 409 aa22.35■■□□□ 1.17
MBD3-208ENST00000590830 DHRS13Q6UX07 377 aa22.35■■□□□ 1.17
MBD3-208ENST00000590830 LPCAT1Q8NF37 534 aa22.35■■□□□ 1.17
MBD3-208ENST00000590830 SPATA22Q8NHS9 363 aa22.35■■□□□ 1.17
MBD3-208ENST00000590830 NUS1Q96E22 293 aa22.35■■□□□ 1.17
MBD3-208ENST00000590830 TRIB3Q96RU7 358 aa22.35■■□□□ 1.17
MBD3-208ENST00000590830 LRRC61Q9BV99 259 aa22.35■■□□□ 1.17
MBD3-208ENST00000590830 C10orf88Q9H8K7 445 aa22.35■■□□□ 1.17
MBD3-208ENST00000590830 NLGN3Q9NZ94 848 aa22.35■■□□□ 1.17
MBD3-208ENST00000590830 APOBEC3BQ9UH17 382 aaKnown RBP22.35■■□□□ 1.17
MBD3-208ENST00000590830 RPL26L1Q9UNX3 145 aaKnown RBP22.35■■□□□ 1.17
MBD3-208ENST00000590830 PCDHGA1Q9Y5H4 931 aa22.35■■□□□ 1.17
MBD3-208ENST00000590830 ADGRG1Q9Y653 693 aa22.35■■□□□ 1.17
MBD3-208ENST00000590830 U3KQA8 63 aa22.35■■□□□ 1.17
MBD3-208ENST00000590830 AKAP13Q12802 2813 aa22.35■■□□□ 1.17
MBD3-208ENST00000590830 FRYQ5TBA9 3013 aa22.34■■□□□ 1.17
MBD3-208ENST00000590830 ASPMQ8IZT6 3477 aa22.34■■□□□ 1.17
MBD3-208ENST00000590830 CCDC66A2RUB6 948 aa22.34■■□□□ 1.17
MBD3-208ENST00000590830 NEMP2A6NFY4 417 aa22.34■■□□□ 1.17
MBD3-208ENST00000590830 CAPN8A6NHC0 703 aa22.34■■□□□ 1.17
MBD3-208ENST00000590830 CELA2BP08218 269 aaPredicted RBP22.34■■□□□ 1.17
MBD3-208ENST00000590830 C1SP09871 688 aa22.34■■□□□ 1.17
MBD3-208ENST00000590830 NFKBIAP25963 317 aa22.34■■□□□ 1.17
MBD3-208ENST00000590830 RWDD2BP57060 319 aa22.34■■□□□ 1.17
MBD3-208ENST00000590830 GSDMDP57764 484 aa22.34■■□□□ 1.17
MBD3-208ENST00000590830 ARHGEF7Q14155 803 aa22.34■■□□□ 1.17
MBD3-208ENST00000590830 PRRT3Q5FWE3 981 aa22.34■■□□□ 1.17
MBD3-208ENST00000590830 TMPRSS7Q7RTY8 843 aa22.34■■□□□ 1.17
MBD3-208ENST00000590830 HID1Q8IV36 788 aa22.34■■□□□ 1.17
MBD3-208ENST00000590830 NDUFAF2Q8N183 169 aa22.34■■□□□ 1.17
MBD3-208ENST00000590830 BTN2A2Q8WVV5 523 aa22.34■■□□□ 1.17
MBD3-208ENST00000590830 OR1E3Q8WZA6 343 aa22.34■■□□□ 1.17
MBD3-208ENST00000590830 GATA6Q92908 595 aa22.34■■□□□ 1.17
MBD3-208ENST00000590830 WDR92Q96MX6 357 aa22.34■■□□□ 1.17
MBD3-208ENST00000590830 OSBPL8Q9BZF1 889 aa22.34■■□□□ 1.17
MBD3-208ENST00000590830 ABCG8Q9H221 673 aa22.34■■□□□ 1.17
MBD3-208ENST00000590830 SPASTQ9UBP0 616 aa22.34■■□□□ 1.17
MBD3-208ENST00000590830 PACSIN2Q9UNF0 486 aaPredicted RBP22.34■■□□□ 1.17
MBD3-208ENST00000590830 EFR3BQ9Y2G0 817 aa22.34■■□□□ 1.17
MBD3-208ENST00000590830 C1QTNF9BB2RNN3 333 aa22.33■■□□□ 1.17
MBD3-208ENST00000590830 ANKRD66B4E2M5 251 aa22.33■■□□□ 1.17
MBD3-208ENST00000590830 DDX3YO15523 660 aaKnown RBP22.33■■□□□ 1.17
MBD3-208ENST00000590830 CLDN7O95471 211 aa22.33■■□□□ 1.17
MBD3-208ENST00000590830 FTCDO95954 541 aa22.33■■□□□ 1.17
MBD3-208ENST00000590830 MT-CYBP00156 380 aaPredicted RBP22.33■■□□□ 1.17
MBD3-208ENST00000590830 C1QTNF9P0C862 333 aa22.33■■□□□ 1.17
MBD3-208ENST00000590830 TSHRP16473 764 aa22.33■■□□□ 1.17
MBD3-208ENST00000590830 HTR1BP28222 390 aa22.33■■□□□ 1.17
MBD3-208ENST00000590830 PTPN7P35236 360 aa22.33■■□□□ 1.17
MBD3-208ENST00000590830 HK3P52790 923 aa22.33■■□□□ 1.17
MBD3-208ENST00000590830 STC1P52823 247 aa22.33■■□□□ 1.17
MBD3-208ENST00000590830 CLDN6P56747 220 aa22.33■■□□□ 1.17
MBD3-208ENST00000590830 KIAA1024LP59773 190 aa22.33■■□□□ 1.17
MBD3-208ENST00000590830 SRP54P61011 504 aaKnown RBP22.33■■□□□ 1.17
MBD3-208ENST00000590830 SMAD1Q15797 465 aaKnown RBP22.33■■□□□ 1.17
MBD3-208ENST00000590830 DEFB133Q30KQ1 61 aa22.33■■□□□ 1.17
MBD3-208ENST00000590830 CCNI2Q6ZMN8 369 aaPredicted RBP22.33■■□□□ 1.17
MBD3-208ENST00000590830 KDELC2Q7Z4H8 507 aa22.33■■□□□ 1.17
MBD3-208ENST00000590830 FAM181AQ8N9Y4 354 aa22.33■■□□□ 1.17
MBD3-208ENST00000590830 APOLD1Q96LR9 279 aa22.33■■□□□ 1.17
MBD3-208ENST00000590830 TBATAQ96M53 351 aa22.33■■□□□ 1.17
MBD3-208ENST00000590830 QKIQ96PU8 341 aaKnown RBP eCLIP22.33■■□□□ 1.17
MBD3-208ENST00000590830 LYSMD1Q96S90 227 aa22.33■■□□□ 1.17
MBD3-208ENST00000590830 SLC13A1Q9BZW2 595 aa22.33■■□□□ 1.17
MBD3-208ENST00000590830 FGF22Q9HCT0 170 aa22.33■■□□□ 1.17
MBD3-208ENST00000590830 MRPL40Q9NQ50 206 aaKnown RBP22.33■■□□□ 1.17
MBD3-208ENST00000590830 CD84Q9UIB8 345 aa22.33■■□□□ 1.17
MBD3-208ENST00000590830 AMFRQ9UKV5 643 aa22.33■■□□□ 1.17
MBD3-208ENST00000590830 CAPN6Q9Y6Q1 641 aa22.33■■□□□ 1.17
MBD3-208ENST00000590830 GOLGA6L6A8MZA4 724 aa22.32■■□□□ 1.16
MBD3-208ENST00000590830 APOC4-APOC2K7ER74 178 aa22.32■■□□□ 1.16
MBD3-208ENST00000590830 YY2O15391 372 aa22.32■■□□□ 1.16
MBD3-208ENST00000590830 SOD1P00441 154 aa22.32■■□□□ 1.16
MBD3-208ENST00000590830 APOC2P02655 101 aa22.32■■□□□ 1.16
MBD3-208ENST00000590830 CA4P22748 312 aa22.32■■□□□ 1.16
MBD3-208ENST00000590830 ACP1P24666 158 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms