RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 NDUFAF2Q8N183 169 aa14.38□□□□□ -0.11
MBD1-220ENST00000589758 ARL14Q8N4G2 192 aa14.38□□□□□ -0.11
MBD1-220ENST00000589758 TC2NQ8N9U0 490 aa14.38□□□□□ -0.11
MBD1-220ENST00000589758 LSM14AQ8ND56 463 aaKnown RBP14.38□□□□□ -0.11
MBD1-220ENST00000589758 GPR156Q8NFN8 814 aa14.38□□□□□ -0.11
MBD1-220ENST00000589758 KCNE4Q8WWG9 221 aa14.38□□□□□ -0.11
MBD1-220ENST00000589758 OR1E3Q8WZA6 343 aa14.38□□□□□ -0.11
MBD1-220ENST00000589758 CCDC74AQ96AQ1 378 aa14.38□□□□□ -0.11
MBD1-220ENST00000589758 NUS1Q96E22 293 aa14.38□□□□□ -0.11
MBD1-220ENST00000589758 CCDC97Q96F63 343 aaPredicted RBP14.38□□□□□ -0.11
MBD1-220ENST00000589758 SCRN2Q96FV2 425 aa14.38□□□□□ -0.11
MBD1-220ENST00000589758 NAF1Q96HR8 494 aaKnown RBP14.38□□□□□ -0.11
MBD1-220ENST00000589758 BBC3Q96PG8 261 aaPredicted RBP14.38□□□□□ -0.11
MBD1-220ENST00000589758 GFM1Q96RP9 751 aaKnown RBP14.38□□□□□ -0.11
MBD1-220ENST00000589758 SYNDIG1Q9H7V2 258 aa14.38□□□□□ -0.11
MBD1-220ENST00000589758 NHEJ1Q9H9Q4 299 aaPredicted RBP14.38□□□□□ -0.11
MBD1-220ENST00000589758 FGF22Q9HCT0 170 aa14.38□□□□□ -0.11
MBD1-220ENST00000589758 PHPT1Q9NRX4 125 aaPredicted RBP14.38□□□□□ -0.11
MBD1-220ENST00000589758 HAUS2Q9NVX0 235 aa14.38□□□□□ -0.11
MBD1-220ENST00000589758 LCMT1Q9UIC8 334 aa14.38□□□□□ -0.11
MBD1-220ENST00000589758 TTC24A2A3L6 582 aaPredicted RBP14.37□□□□□ -0.11
MBD1-220ENST00000589758 HEXIM1O94992 359 aaKnown RBP14.37□□□□□ -0.11
MBD1-220ENST00000589758 PGLSO95336 258 aa14.37□□□□□ -0.11
MBD1-220ENST00000589758 MYCLP1P12525 358 aaPredicted RBP14.37□□□□□ -0.11
MBD1-220ENST00000589758 PNLIPP16233 465 aa14.37□□□□□ -0.11
MBD1-220ENST00000589758 GLB1P16278 677 aa14.37□□□□□ -0.11
MBD1-220ENST00000589758 IL4RP24394 825 aa14.37□□□□□ -0.11
MBD1-220ENST00000589758 SSR1P43307 286 aaKnown RBP14.37□□□□□ -0.11
MBD1-220ENST00000589758 TMPRSS3P57727 454 aa14.37□□□□□ -0.11
MBD1-220ENST00000589758 TRAF2Q12933 501 aa14.37□□□□□ -0.11
MBD1-220ENST00000589758 EIF3IQ13347 325 aaKnown RBP14.37□□□□□ -0.11
MBD1-220ENST00000589758 ARHGEF7Q14155 803 aa14.37□□□□□ -0.11
MBD1-220ENST00000589758 TIGD7Q6NT04 549 aaPredicted RBP14.37□□□□□ -0.11
MBD1-220ENST00000589758 USP45Q70EL2 814 aa14.37□□□□□ -0.11
MBD1-220ENST00000589758 CBARPQ8N350 705 aaPredicted RBP14.37□□□□□ -0.11
MBD1-220ENST00000589758 TEX26Q8N6G2 289 aa14.37□□□□□ -0.11
MBD1-220ENST00000589758 FAM46DQ8NEK8 389 aa14.37□□□□□ -0.11
MBD1-220ENST00000589758 ZNF564Q8TBZ8 553 aaPredicted RBP14.37□□□□□ -0.11
MBD1-220ENST00000589758 DTD2Q96FN9 168 aa14.37□□□□□ -0.11
MBD1-220ENST00000589758 LIN37Q96GY3 246 aaPredicted RBP14.37□□□□□ -0.11
MBD1-220ENST00000589758 PRR11Q96HE9 360 aaPredicted RBP14.37□□□□□ -0.11
MBD1-220ENST00000589758 CCDC42Q96M95 316 aa14.37□□□□□ -0.11
MBD1-220ENST00000589758 TMEM74Q96NL1 305 aa14.37□□□□□ -0.11
MBD1-220ENST00000589758 STRADBQ9C0K7 418 aa14.37□□□□□ -0.11
MBD1-220ENST00000589758 TMEM168Q9H0V1 697 aa14.37□□□□□ -0.11
MBD1-220ENST00000589758 CYP4F12Q9HCS2 524 aa14.37□□□□□ -0.11
MBD1-220ENST00000589758 MRPL40Q9NQ50 206 aaKnown RBP14.37□□□□□ -0.11
MBD1-220ENST00000589758 SPTLC3Q9NUV7 552 aa14.37□□□□□ -0.11
MBD1-220ENST00000589758 MOSPD1Q9UJG1 213 aa14.37□□□□□ -0.11
MBD1-220ENST00000589758 APPL1Q9UKG1 709 aa14.37□□□□□ -0.11
MBD1-220ENST00000589758 PPIL1Q9Y3C6 166 aa14.37□□□□□ -0.11
MBD1-220ENST00000589758 RP1P56715 2156 aa14.37□□□□□ -0.11
MBD1-220ENST00000589758 A0A1W2PNU3 283 aaPredicted RBP14.36□□□□□ -0.11
MBD1-220ENST00000589758 SSU72P8A0A1W2PR75 194 aa14.36□□□□□ -0.11
MBD1-220ENST00000589758 PRSS38A1L453 326 aa14.36□□□□□ -0.11
MBD1-220ENST00000589758 CDRT15L2A8MXV6 281 aa14.36□□□□□ -0.11
MBD1-220ENST00000589758 ATXN7O15265 892 aaPredicted RBP14.36□□□□□ -0.11
MBD1-220ENST00000589758 CES1P23141 567 aa14.36□□□□□ -0.11
MBD1-220ENST00000589758 TEAD1P28347 426 aa14.36□□□□□ -0.11
MBD1-220ENST00000589758 GARSP41250 739 aaKnown RBP14.36□□□□□ -0.11
MBD1-220ENST00000589758 PDX1P52945 283 aa14.36□□□□□ -0.11
MBD1-220ENST00000589758 MAXP61244 160 aa14.36□□□□□ -0.11
MBD1-220ENST00000589758 CXADRP78310 365 aa14.36□□□□□ -0.11
MBD1-220ENST00000589758 CCL7P80098 99 aa14.36□□□□□ -0.11
MBD1-220ENST00000589758 ITKQ08881 620 aa14.36□□□□□ -0.11
MBD1-220ENST00000589758 PAFAH1B3Q15102 231 aaKnown RBP14.36□□□□□ -0.11
MBD1-220ENST00000589758 PDK2Q15119 407 aa14.36□□□□□ -0.11
MBD1-220ENST00000589758 TCEA2Q15560 299 aa14.36□□□□□ -0.11
MBD1-220ENST00000589758 SLC18A3Q16572 532 aa14.36□□□□□ -0.11
MBD1-220ENST00000589758 ASTE1Q2TB18 679 aaPredicted RBP14.36□□□□□ -0.11
MBD1-220ENST00000589758 C14orf28Q4W4Y0 310 aa14.36□□□□□ -0.11
MBD1-220ENST00000589758 DENND2CQ68D51 928 aa14.36□□□□□ -0.11
MBD1-220ENST00000589758 FOXR1Q6PIV2 292 aa14.36□□□□□ -0.11
MBD1-220ENST00000589758 NYAP1Q6ZVC0 841 aa14.36□□□□□ -0.11
MBD1-220ENST00000589758 MAP7D3Q8IWC1 876 aa14.36□□□□□ -0.11
MBD1-220ENST00000589758 SPC24Q8NBT2 197 aa14.36□□□□□ -0.11
MBD1-220ENST00000589758 KIAA1524Q8TCG1 905 aa14.36□□□□□ -0.11
MBD1-220ENST00000589758 ZNF670Q9BS34 389 aa14.36□□□□□ -0.11
MBD1-220ENST00000589758 LGR4Q9BXB1 951 aa14.36□□□□□ -0.11
MBD1-220ENST00000589758 PACSIN1Q9BY11 444 aa14.36□□□□□ -0.11
MBD1-220ENST00000589758 TEX101Q9BY14 249 aa14.36□□□□□ -0.11
MBD1-220ENST00000589758 POLR1EQ9GZS1 481 aaKnown RBP14.36□□□□□ -0.11
MBD1-220ENST00000589758 LRRN3Q9H3W5 708 aa14.36□□□□□ -0.11
MBD1-220ENST00000589758 DPEP2Q9H4A9 486 aa14.36□□□□□ -0.11
MBD1-220ENST00000589758 NT5MQ9NPB1 228 aa14.36□□□□□ -0.11
MBD1-220ENST00000589758 UVRAGQ9P2Y5 699 aa14.36□□□□□ -0.11
MBD1-220ENST00000589758 AMACRQ9UHK6 382 aa14.36□□□□□ -0.11
MBD1-220ENST00000589758 RABGEF1Q9UJ41 708 aa14.36□□□□□ -0.11
MBD1-220ENST00000589758 NENFQ9UMX5 172 aa14.36□□□□□ -0.11
MBD1-220ENST00000589758 SHROOM3Q8TF72 1996 aa14.36□□□□□ -0.11
MBD1-220ENST00000589758 D6RAR5 112 aa14.35□□□□□ -0.11
MBD1-220ENST00000589758 KLK10O43240 276 aa14.35□□□□□ -0.11
MBD1-220ENST00000589758 NOBOXO60393 691 aa14.35□□□□□ -0.11
MBD1-220ENST00000589758 PROSCO94903 275 aa14.35□□□□□ -0.11
MBD1-220ENST00000589758 TNFSF15O95150 251 aa14.35□□□□□ -0.11
MBD1-220ENST00000589758 RPLP0P05388 317 aaKnown RBP14.35□□□□□ -0.11
MBD1-220ENST00000589758 ITGA2BP08514 1039 aa14.35□□□□□ -0.11
MBD1-220ENST00000589758 KRT7P08729 469 aa14.35□□□□□ -0.11
MBD1-220ENST00000589758 CD48P09326 243 aa14.35□□□□□ -0.11
MBD1-220ENST00000589758 H2AFZP0C0S5 128 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms